RNA–Protein interactions for RNA: ENST00000417344.2

CCNT1-202, Transcript of cyclin T1, humanhuman

TSL 2

Gene CCNT1, Length 2,017 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1-202ENST00000417344 RORAP35398 523 aa6.11□□□□□ -1.43
CCNT1-202ENST00000417344 MMP12P39900 470 aa6.11□□□□□ -1.43
CCNT1-202ENST00000417344 CRKP46108 304 aa6.11□□□□□ -1.43
CCNT1-202ENST00000417344 PIK3CGP48736 1102 aa6.11□□□□□ -1.43
CCNT1-202ENST00000417344 EVX1P49640 407 aa6.11□□□□□ -1.43
CCNT1-202ENST00000417344 MAZP56270 477 aaKnown RBP6.11□□□□□ -1.43
CCNT1-202ENST00000417344 TSPAN5P62079 268 aa6.11□□□□□ -1.43
CCNT1-202ENST00000417344 ERVK-25P63136 954 aa6.11□□□□□ -1.43
CCNT1-202ENST00000417344 SP4Q02446 784 aa6.11□□□□□ -1.43
CCNT1-202ENST00000417344 CAPSQ13938 189 aa6.11□□□□□ -1.43
CCNT1-202ENST00000417344 GAS6Q14393 721 aa6.11□□□□□ -1.43
CCNT1-202ENST00000417344 UGT8Q16880 541 aa6.11□□□□□ -1.43
CCNT1-202ENST00000417344 SLC25A52Q3SY17 297 aa6.11□□□□□ -1.43
CCNT1-202ENST00000417344 C3orf38Q5JPI3 329 aa6.11□□□□□ -1.43
CCNT1-202ENST00000417344 RTP2Q5QGT7 225 aa6.11□□□□□ -1.43
CCNT1-202ENST00000417344 BEND4Q6ZU67 534 aa6.11□□□□□ -1.43
CCNT1-202ENST00000417344 OTOP2Q7RTS6 562 aa6.11□□□□□ -1.43
CCNT1-202ENST00000417344 TRMT11Q7Z4G4 463 aaKnown RBP6.11□□□□□ -1.43
CCNT1-202ENST00000417344 VTCN1Q7Z7D3 282 aa6.11□□□□□ -1.43
CCNT1-202ENST00000417344 CILP2Q8IUL8 1156 aa6.11□□□□□ -1.43
CCNT1-202ENST00000417344 KRT78Q8N1N4 520 aa6.11□□□□□ -1.43
CCNT1-202ENST00000417344 C12orf45Q8N5I9 185 aaPredicted RBP6.11□□□□□ -1.43
CCNT1-202ENST00000417344 ARL6IP6Q8N6S5 226 aa6.11□□□□□ -1.43
CCNT1-202ENST00000417344 CAMKVQ8NCB2 501 aa6.11□□□□□ -1.43
CCNT1-202ENST00000417344 WDR20Q8TBZ3 569 aa6.11□□□□□ -1.43
CCNT1-202ENST00000417344 RAD51AP1Q96B01 352 aa6.11□□□□□ -1.43
CCNT1-202ENST00000417344 OTULINQ96BN8 352 aa6.11□□□□□ -1.43
CCNT1-202ENST00000417344 ELP4Q96EB1 424 aa6.11□□□□□ -1.43
CCNT1-202ENST00000417344 TRMT2BQ96GJ1 504 aaKnown RBP6.11□□□□□ -1.43
CCNT1-202ENST00000417344 PPP3R2Q96LZ3 170 aa6.11□□□□□ -1.43
CCNT1-202ENST00000417344 KCTD7Q96MP8 289 aa6.11□□□□□ -1.43
CCNT1-202ENST00000417344 NELL2Q99435 816 aa6.11□□□□□ -1.43
CCNT1-202ENST00000417344 FEVQ99581 238 aa6.11□□□□□ -1.43
CCNT1-202ENST00000417344 GAL3ST1Q99999 423 aa6.11□□□□□ -1.43
CCNT1-202ENST00000417344 CPPED1Q9BRF8 314 aaPredicted RBP6.11□□□□□ -1.43
CCNT1-202ENST00000417344 PDCD10Q9BUL8 212 aa6.11□□□□□ -1.43
CCNT1-202ENST00000417344 KATNB1Q9BVA0 655 aa6.11□□□□□ -1.43
CCNT1-202ENST00000417344 FICDQ9BVA6 458 aa6.11□□□□□ -1.43
CCNT1-202ENST00000417344 SEMA4CQ9C0C4 833 aa6.11□□□□□ -1.43
CCNT1-202ENST00000417344 HDHD2Q9H0R4 259 aa6.11□□□□□ -1.43
CCNT1-202ENST00000417344 ABHD16BQ9H3Z7 469 aa6.11□□□□□ -1.43
CCNT1-202ENST00000417344 GAREM1Q9H706 876 aa6.11□□□□□ -1.43
CCNT1-202ENST00000417344 C8orf33Q9H7E9 229 aaPredicted RBP6.11□□□□□ -1.43
CCNT1-202ENST00000417344 NIT2Q9NQR4 276 aa6.11□□□□□ -1.43
CCNT1-202ENST00000417344 COX16Q9P0S2 106 aa6.11□□□□□ -1.43
CCNT1-202ENST00000417344 RPS6KA6Q9UK32 745 aa6.11□□□□□ -1.43
CCNT1-202ENST00000417344 ING1Q9UK53 422 aaPredicted RBP6.11□□□□□ -1.43
CCNT1-202ENST00000417344 HCN2Q9UL51 889 aa6.11□□□□□ -1.43
CCNT1-202ENST00000417344 SMCHD1A6NHR9 2005 aa6.11□□□□□ -1.43
CCNT1-202ENST00000417344 TEX13CA0A0J9YWL9 993 aa6.1□□□□□ -1.43
CCNT1-202ENST00000417344 LOC285095A0A1B0GVY8 99 aa6.1□□□□□ -1.43
CCNT1-202ENST00000417344 YDJCA8MPS7 323 aa6.1□□□□□ -1.43
CCNT1-202ENST00000417344 J3KR12 359 aa6.1□□□□□ -1.43
CCNT1-202ENST00000417344 WNT9AO14904 365 aa6.1□□□□□ -1.43
CCNT1-202ENST00000417344 ANXA9O76027 345 aa6.1□□□□□ -1.43
CCNT1-202ENST00000417344 GLP2RO95838 553 aa6.1□□□□□ -1.43
CCNT1-202ENST00000417344 IGHV2-70P01814 119 aa6.1□□□□□ -1.43
CCNT1-202ENST00000417344 S100A8P05109 93 aa6.1□□□□□ -1.43
CCNT1-202ENST00000417344 ICAM1P05362 532 aa6.1□□□□□ -1.43
CCNT1-202ENST00000417344 SYPP08247 313 aa6.1□□□□□ -1.43
CCNT1-202ENST00000417344 NFICP08651 508 aa6.1□□□□□ -1.43
CCNT1-202ENST00000417344 HIST1H2AGP0C0S8 130 aaPredicted RBP6.1□□□□□ -1.43
CCNT1-202ENST00000417344 ODC1P11926 461 aa6.1□□□□□ -1.43
CCNT1-202ENST00000417344 CD33P20138 364 aa6.1□□□□□ -1.43
CCNT1-202ENST00000417344 HIST1H2ADP20671 130 aa6.1□□□□□ -1.43
CCNT1-202ENST00000417344 FDXRP22570 491 aa6.1□□□□□ -1.43
CCNT1-202ENST00000417344 ITPKAP23677 461 aa6.1□□□□□ -1.43
CCNT1-202ENST00000417344 PTAFRP25105 342 aa6.1□□□□□ -1.43
CCNT1-202ENST00000417344 ACADLP28330 430 aa6.1□□□□□ -1.43
CCNT1-202ENST00000417344 RFC3P40938 356 aa6.1□□□□□ -1.43
CCNT1-202ENST00000417344 CHRNA4P43681 627 aa6.1□□□□□ -1.43
CCNT1-202ENST00000417344 BDKRB1P46663 353 aa6.1□□□□□ -1.43
CCNT1-202ENST00000417344 KCNJ5P48544 419 aa6.1□□□□□ -1.43
CCNT1-202ENST00000417344 STK19P49842 368 aaPredicted RBP6.1□□□□□ -1.43
CCNT1-202ENST00000417344 CACNB2Q08289 660 aaPredicted RBP6.1□□□□□ -1.43
CCNT1-202ENST00000417344 ABHD18Q0P651 414 aa6.1□□□□□ -1.43
CCNT1-202ENST00000417344 MLLT11Q13015 90 aaPredicted RBP6.1□□□□□ -1.43
CCNT1-202ENST00000417344 PUM1Q14671 1186 aaKnown RBP eCLIP6.1□□□□□ -1.43
CCNT1-202ENST00000417344 PTGR1Q14914 329 aa6.1□□□□□ -1.43
CCNT1-202ENST00000417344 CHRNA6Q15825 494 aa6.1□□□□□ -1.43
CCNT1-202ENST00000417344 MICBQ29980 383 aa6.1□□□□□ -1.43
CCNT1-202ENST00000417344 SLC39A12Q504Y0 691 aa6.1□□□□□ -1.43
CCNT1-202ENST00000417344 RFTN2Q52LD8 501 aaPredicted RBP6.1□□□□□ -1.43
CCNT1-202ENST00000417344 SPIN4Q56A73 249 aa6.1□□□□□ -1.43
CCNT1-202ENST00000417344 SPANXN4Q5MJ08 99 aa6.1□□□□□ -1.43
CCNT1-202ENST00000417344 PRAMEF19Q5SWL8 479 aa6.1□□□□□ -1.43
CCNT1-202ENST00000417344 LIPKQ5VXJ0 399 aa6.1□□□□□ -1.43
CCNT1-202ENST00000417344 HIST2H2AA3Q6FI13 130 aa6.1□□□□□ -1.43
CCNT1-202ENST00000417344 AFTPHQ6ULP2 937 aa6.1□□□□□ -1.43
CCNT1-202ENST00000417344 HHIPL2Q6UWX4 724 aa6.1□□□□□ -1.43
CCNT1-202ENST00000417344 KDELC2Q7Z4H8 507 aa6.1□□□□□ -1.43
CCNT1-202ENST00000417344 LDB1Q86U70 411 aaPredicted RBP6.1□□□□□ -1.43
CCNT1-202ENST00000417344 TBC1D19Q8N5T2 526 aa6.1□□□□□ -1.43
CCNT1-202ENST00000417344 PLA2G15Q8NCC3 412 aa6.1□□□□□ -1.43
CCNT1-202ENST00000417344 OR56A4Q8NGH8 313 aa6.1□□□□□ -1.43
CCNT1-202ENST00000417344 OR52P1PQ8NH57 321 aa6.1□□□□□ -1.43
CCNT1-202ENST00000417344 STAG3L4Q8TBR4 150 aa6.1□□□□□ -1.43
CCNT1-202ENST00000417344 SETD7Q8WTS6 366 aaKnown RBP6.1□□□□□ -1.43
CCNT1-202ENST00000417344 SCARB1Q8WTV0 552 aa6.1□□□□□ -1.43
CCNT1-202ENST00000417344 HPDLQ96IR7 371 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms