RNA–Protein interactions for RNA: ENST00000416957.5

FNDC3B-203, Transcript of fibronectin type III domain containing 3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FNDC3B, Length 3,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-203ENST00000416957 PRAMEF14Q5SWL7 426 aa8.1□□□□□ -1.11
FNDC3B-203ENST00000416957 PRAMEF13Q5VWM6 474 aa8.1□□□□□ -1.11
FNDC3B-203ENST00000416957 KHDRBS2Q5VWX1 349 aaKnown RBP8.1□□□□□ -1.11
FNDC3B-203ENST00000416957 RNF111Q6ZNA4 994 aa8.1□□□□□ -1.11
FNDC3B-203ENST00000416957 FAM156AQ8NDB6 213 aa8.1□□□□□ -1.11
FNDC3B-203ENST00000416957 OR1N1Q8NGS0 311 aa8.1□□□□□ -1.11
FNDC3B-203ENST00000416957 ZFP90Q8TF47 636 aa8.1□□□□□ -1.11
FNDC3B-203ENST00000416957 ZSWIM3Q96MP5 696 aa8.1□□□□□ -1.11
FNDC3B-203ENST00000416957 EBNA1BP2Q99848 306 aaKnown RBP8.1□□□□□ -1.11
FNDC3B-203ENST00000416957 MRI1Q9BV20 369 aa8.1□□□□□ -1.11
FNDC3B-203ENST00000416957 MFRPQ9BY79 579 aa8.1□□□□□ -1.11
FNDC3B-203ENST00000416957 TMEM117Q9H0C3 514 aa8.1□□□□□ -1.11
FNDC3B-203ENST00000416957 SEBOXQ9HB31 216 aaPredicted RBP8.1□□□□□ -1.11
FNDC3B-203ENST00000416957 SLAMF7Q9NQ25 335 aa8.1□□□□□ -1.11
FNDC3B-203ENST00000416957 CENPMQ9NSP4 180 aa8.1□□□□□ -1.11
FNDC3B-203ENST00000416957 APOBEC3BQ9UH17 382 aaKnown RBP8.1□□□□□ -1.11
FNDC3B-203ENST00000416957 CTNND2Q9UQB3 1225 aa8.1□□□□□ -1.11
FNDC3B-203ENST00000416957 ZNF451Q9Y4E5 1061 aa8.1□□□□□ -1.11
FNDC3B-203ENST00000416957 HSPB11Q9Y547 144 aa8.1□□□□□ -1.11
FNDC3B-203ENST00000416957 ANKRD63C9JTQ0 380 aa8.1□□□□□ -1.11
FNDC3B-203ENST00000416957 LRRN3E7EW58 273 aa8.1□□□□□ -1.11
FNDC3B-203ENST00000416957 H7C4K7 107 aa8.1□□□□□ -1.11
FNDC3B-203ENST00000416957 RAD51CO43502 376 aa8.1□□□□□ -1.11
FNDC3B-203ENST00000416957 TSPAN2O60636 221 aa8.1□□□□□ -1.11
FNDC3B-203ENST00000416957 SOX30O94993 753 aa8.1□□□□□ -1.11
FNDC3B-203ENST00000416957 STAG3L2P0CL84 134 aa8.1□□□□□ -1.11
FNDC3B-203ENST00000416957 CD19P15391 556 aa8.1□□□□□ -1.11
FNDC3B-203ENST00000416957 CD44P16070 742 aaKnown RBP8.1□□□□□ -1.11
FNDC3B-203ENST00000416957 FGFR3P22607 806 aa8.1□□□□□ -1.11
FNDC3B-203ENST00000416957 EEF1B2P24534 225 aaKnown RBP8.1□□□□□ -1.11
FNDC3B-203ENST00000416957 MAPK10P53779 464 aa8.1□□□□□ -1.11
FNDC3B-203ENST00000416957 GAGE1Q13065 139 aa8.1□□□□□ -1.11
FNDC3B-203ENST00000416957 EEF1DP3Q658K8 133 aa8.1□□□□□ -1.11
FNDC3B-203ENST00000416957 GALNT10Q86SR1 603 aa8.1□□□□□ -1.11
FNDC3B-203ENST00000416957 TMPRSS6Q8IU80 811 aa8.1□□□□□ -1.11
FNDC3B-203ENST00000416957 DDIASQ8IXT1 998 aa8.1□□□□□ -1.11
FNDC3B-203ENST00000416957 CDYL2Q8N8U2 506 aa8.1□□□□□ -1.11
FNDC3B-203ENST00000416957 SMG8Q8ND04 991 aaKnown RBP8.1□□□□□ -1.11
FNDC3B-203ENST00000416957 OR10T2Q8NGX3 314 aa8.1□□□□□ -1.11
FNDC3B-203ENST00000416957 SP7Q8TDD2 431 aaPredicted RBP8.1□□□□□ -1.11
FNDC3B-203ENST00000416957 C2CD4CQ8TF44 421 aa8.1□□□□□ -1.11
FNDC3B-203ENST00000416957 CYGBQ8WWM9 190 aa8.1□□□□□ -1.11
FNDC3B-203ENST00000416957 PDLIM5Q96HC4 596 aaKnown RBP8.1□□□□□ -1.11
FNDC3B-203ENST00000416957 NECAB3Q96P71 396 aaPredicted RBP8.1□□□□□ -1.11
FNDC3B-203ENST00000416957 CMSS1Q9BQ75 279 aaKnown RBP8.1□□□□□ -1.11
FNDC3B-203ENST00000416957 DHRS4Q9BTZ2 278 aa8.1□□□□□ -1.11
FNDC3B-203ENST00000416957 PRO3102Q9H379 93 aa8.1□□□□□ -1.11
FNDC3B-203ENST00000416957 LRRN3Q9H3W5 708 aa8.1□□□□□ -1.11
FNDC3B-203ENST00000416957 RANGRFQ9HD47 186 aaPredicted RBP8.1□□□□□ -1.11
FNDC3B-203ENST00000416957 DYRK4Q9NR20 520 aa8.1□□□□□ -1.11
FNDC3B-203ENST00000416957 ABHD10Q9NUJ1 306 aa8.1□□□□□ -1.11
FNDC3B-203ENST00000416957 TFR2Q9UP52 801 aa8.1□□□□□ -1.11
FNDC3B-203ENST00000416957 TLR6Q9Y2C9 796 aa8.1□□□□□ -1.11
FNDC3B-203ENST00000416957 MSRB2Q9Y3D2 182 aa8.1□□□□□ -1.11
FNDC3B-203ENST00000416957 GBF1Q92538 1859 aa8.09□□□□□ -1.11
FNDC3B-203ENST00000416957 ERI2A8K979 691 aaKnown RBP8.09□□□□□ -1.11
FNDC3B-203ENST00000416957 SUPT3HB4E1H0 165 aa8.09□□□□□ -1.11
FNDC3B-203ENST00000416957 MID1O15344 667 aa8.09□□□□□ -1.11
FNDC3B-203ENST00000416957 RHBDL1O75783 438 aa8.09□□□□□ -1.11
FNDC3B-203ENST00000416957 LBPP18428 481 aa8.09□□□□□ -1.11
FNDC3B-203ENST00000416957 CAPGP40121 348 aa8.09□□□□□ -1.11
FNDC3B-203ENST00000416957 FGF8P55075 233 aaPredicted RBP8.09□□□□□ -1.11
FNDC3B-203ENST00000416957 UGT3A2Q3SY77 523 aa8.09□□□□□ -1.11
FNDC3B-203ENST00000416957 ALKAL1Q6UXT8 129 aa8.09□□□□□ -1.11
FNDC3B-203ENST00000416957 LRRC55Q6ZSA7 311 aa8.09□□□□□ -1.11
FNDC3B-203ENST00000416957 LYSMD2Q8IV50 215 aa8.09□□□□□ -1.11
FNDC3B-203ENST00000416957 PARP8Q8N3A8 854 aa8.09□□□□□ -1.11
FNDC3B-203ENST00000416957 FAM89BQ8N5H3 189 aa8.09□□□□□ -1.11
FNDC3B-203ENST00000416957 OR2C3Q8N628 320 aa8.09□□□□□ -1.11
FNDC3B-203ENST00000416957 GLIS3Q8NEA6 775 aa8.09□□□□□ -1.11
FNDC3B-203ENST00000416957 NDNFQ8TB73 568 aa8.09□□□□□ -1.11
FNDC3B-203ENST00000416957 PCNPQ8WW12 178 aaKnown RBP8.09□□□□□ -1.11
FNDC3B-203ENST00000416957 HAS2Q92819 552 aa8.09□□□□□ -1.11
FNDC3B-203ENST00000416957 CPB2Q96IY4 423 aa8.09□□□□□ -1.11
FNDC3B-203ENST00000416957 TMEM175Q9BSA9 504 aa8.09□□□□□ -1.11
FNDC3B-203ENST00000416957 THTPAQ9BU02 230 aa8.09□□□□□ -1.11
FNDC3B-203ENST00000416957 EXO5Q9H790 373 aa8.09□□□□□ -1.11
FNDC3B-203ENST00000416957 HIF1ANQ9NWT6 349 aa8.09□□□□□ -1.11
FNDC3B-203ENST00000416957 PCDHB7Q9Y5E2 793 aa8.09□□□□□ -1.11
FNDC3B-203ENST00000416957 TTC3P53804 2025 aa8.09□□□□□ -1.11
FNDC3B-203ENST00000416957 SLC5A10A0PJK1 596 aa8.09□□□□□ -1.11
FNDC3B-203ENST00000416957 SLC22A23A1A5C7 686 aa8.09□□□□□ -1.11
FNDC3B-203ENST00000416957 LRRTM2O43300 516 aa8.09□□□□□ -1.11
FNDC3B-203ENST00000416957 PRKYO43930 277 aa8.09□□□□□ -1.11
FNDC3B-203ENST00000416957 ITGA10O75578 1167 aa8.09□□□□□ -1.11
FNDC3B-203ENST00000416957 GADD45GO95257 159 aa8.09□□□□□ -1.11
FNDC3B-203ENST00000416957 PDGFBP01127 241 aaPredicted RBP8.09□□□□□ -1.11
FNDC3B-203ENST00000416957 APRTP07741 180 aa8.09□□□□□ -1.11
FNDC3B-203ENST00000416957 CHRNA3P32297 505 aa8.09□□□□□ -1.11
FNDC3B-203ENST00000416957 ZNF81P51508 661 aa8.09□□□□□ -1.11
FNDC3B-203ENST00000416957 ARL6IP1Q15041 203 aa8.09□□□□□ -1.11
FNDC3B-203ENST00000416957 HNRNPA1L2Q32P51 320 aaKnown RBP8.09□□□□□ -1.11
FNDC3B-203ENST00000416957 MTX3Q5HYI7 312 aa8.09□□□□□ -1.11
FNDC3B-203ENST00000416957 KYAT3Q6YP21 454 aaKnown RBP8.09□□□□□ -1.11
FNDC3B-203ENST00000416957 CYHR1Q6ZMK1 362 aa8.09□□□□□ -1.11
FNDC3B-203ENST00000416957 LINC00299Q6ZSB3 139 aa8.09□□□□□ -1.11
FNDC3B-203ENST00000416957 RTN4RL1Q86UN2 441 aaPredicted RBP8.09□□□□□ -1.11
FNDC3B-203ENST00000416957 VWA5B2Q8N398 1253 aa8.09□□□□□ -1.11
FNDC3B-203ENST00000416957 STX19Q8N4C7 294 aa8.09□□□□□ -1.11
FNDC3B-203ENST00000416957 OR4C15Q8NGM1 316 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms