RNA–Protein interactions for RNA: ENST00000415886.2

CTHRC1-202, Transcript of collagen triple helix repeat containing 1, humanhuman

TSL 2 BASIC

Gene CTHRC1, Length 571 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-202ENST00000415886 TRIM40Q6P9F5 258 aa12.32□□□□□ -0.44
CTHRC1-202ENST00000415886 CHSY3Q70JA7 882 aa12.32□□□□□ -0.44
CTHRC1-202ENST00000415886 MYLK4Q86YV6 388 aaPredicted RBP12.32□□□□□ -0.44
CTHRC1-202ENST00000415886 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.32□□□□□ -0.44
CTHRC1-202ENST00000415886 TEX9Q8N6V9 391 aa12.32□□□□□ -0.44
CTHRC1-202ENST00000415886 SRFBP1Q8NEF9 429 aaKnown RBP12.32□□□□□ -0.44
CTHRC1-202ENST00000415886 OR52N2Q8NGI0 321 aa12.32□□□□□ -0.44
CTHRC1-202ENST00000415886 RHEBL1Q8TAI7 183 aa12.32□□□□□ -0.44
CTHRC1-202ENST00000415886 UHMK1Q8TAS1 419 aaKnown RBP12.32□□□□□ -0.44
CTHRC1-202ENST00000415886 ATP6V1E2Q96A05 226 aa12.32□□□□□ -0.44
CTHRC1-202ENST00000415886 GAL3ST3Q96A11 431 aa12.32□□□□□ -0.44
CTHRC1-202ENST00000415886 FOXC2Q99958 501 aa12.32□□□□□ -0.44
CTHRC1-202ENST00000415886 NPLQ9BXD5 320 aaPredicted RBP12.32□□□□□ -0.44
CTHRC1-202ENST00000415886 ROGDIQ9GZN7 287 aa12.32□□□□□ -0.44
CTHRC1-202ENST00000415886 REXO4Q9GZR2 422 aaKnown RBP12.32□□□□□ -0.44
CTHRC1-202ENST00000415886 CXXC4Q9H2H0 198 aa12.32□□□□□ -0.44
CTHRC1-202ENST00000415886 COPS7BQ9H9Q2 264 aaPredicted RBP12.32□□□□□ -0.44
CTHRC1-202ENST00000415886 NFU1Q9UMS0 254 aa12.32□□□□□ -0.44
CTHRC1-202ENST00000415886 MRPS33Q9Y291 106 aaKnown RBP12.32□□□□□ -0.44
CTHRC1-202ENST00000415886 TNPO3Q9Y5L0 923 aaKnown RBP12.32□□□□□ -0.44
CTHRC1-202ENST00000415886 MTORP42345 2549 aa12.32□□□□□ -0.44
CTHRC1-202ENST00000415886 ITPR3Q14573 2671 aa12.31□□□□□ -0.44
CTHRC1-202ENST00000415886 LRIT2A6NDA9 550 aa12.31□□□□□ -0.44
CTHRC1-202ENST00000415886 SAGE2PA6NJ88 616 aa12.31□□□□□ -0.44
CTHRC1-202ENST00000415886 KLRC4-KLRK1H3BQV0 150 aa12.31□□□□□ -0.44
CTHRC1-202ENST00000415886 FCHO1O14526 889 aa12.31□□□□□ -0.44
CTHRC1-202ENST00000415886 SMIM10L1P0DMW3 83 aa12.31□□□□□ -0.44
CTHRC1-202ENST00000415886 KLK2P20151 261 aa12.31□□□□□ -0.44
CTHRC1-202ENST00000415886 CNTFP26441 200 aa12.31□□□□□ -0.44
CTHRC1-202ENST00000415886 GMPRP36959 345 aa12.31□□□□□ -0.44
CTHRC1-202ENST00000415886 ARL1P40616 181 aaPredicted RBP12.31□□□□□ -0.44
CTHRC1-202ENST00000415886 BTG2P78543 158 aa12.31□□□□□ -0.44
CTHRC1-202ENST00000415886 IRF9Q00978 393 aa12.31□□□□□ -0.44
CTHRC1-202ENST00000415886 DLG1Q12959 904 aa12.31□□□□□ -0.44
CTHRC1-202ENST00000415886 TBCCQ15814 346 aa12.31□□□□□ -0.44
CTHRC1-202ENST00000415886 PFKFB4Q16877 469 aa12.31□□□□□ -0.44
CTHRC1-202ENST00000415886 MDGA2Q7Z553 956 aa12.31□□□□□ -0.44
CTHRC1-202ENST00000415886 OR2L5Q8NG80 312 aa12.31□□□□□ -0.44
CTHRC1-202ENST00000415886 C16orf52Q8NHV5 167 aa12.31□□□□□ -0.44
CTHRC1-202ENST00000415886 SLC44A1Q8WWI5 657 aa12.31□□□□□ -0.44
CTHRC1-202ENST00000415886 SMIM10Q96HG1 83 aa12.31□□□□□ -0.44
CTHRC1-202ENST00000415886 ATOH8Q96SQ7 321 aa12.31□□□□□ -0.44
CTHRC1-202ENST00000415886 CENPKQ9BS16 269 aa12.31□□□□□ -0.44
CTHRC1-202ENST00000415886 GSX1Q9H4S2 264 aaPredicted RBP12.31□□□□□ -0.44
CTHRC1-202ENST00000415886 PRDM9Q9NQV7 894 aa12.31□□□□□ -0.44
CTHRC1-202ENST00000415886 PLSCR2Q9NRY7 297 aa12.31□□□□□ -0.44
CTHRC1-202ENST00000415886 CPSF2Q9P2I0 782 aaKnown RBP12.31□□□□□ -0.44
CTHRC1-202ENST00000415886 ZNF490Q9ULM2 529 aaPredicted RBP12.31□□□□□ -0.44
CTHRC1-202ENST00000415886 SPACA6W5XKT8 324 aa12.31□□□□□ -0.44
CTHRC1-202ENST00000415886 A0A0G2JN53 185 aa12.3□□□□□ -0.44
CTHRC1-202ENST00000415886 A8MUA0 341 aa12.3□□□□□ -0.44
CTHRC1-202ENST00000415886 KLK8O60259 260 aa12.3□□□□□ -0.44
CTHRC1-202ENST00000415886 RHOXF2BP0C7M4 288 aa12.3□□□□□ -0.44
CTHRC1-202ENST00000415886 MAOAP21397 527 aa12.3□□□□□ -0.44
CTHRC1-202ENST00000415886 PIK3CGP48736 1102 aa12.3□□□□□ -0.44
CTHRC1-202ENST00000415886 ALDH18A1P54886 795 aaKnown RBP12.3□□□□□ -0.44
CTHRC1-202ENST00000415886 MTTPP55157 894 aa12.3□□□□□ -0.44
CTHRC1-202ENST00000415886 PPP2R2AP63151 447 aa12.3□□□□□ -0.44
CTHRC1-202ENST00000415886 PHEXP78562 749 aa12.3□□□□□ -0.44
CTHRC1-202ENST00000415886 FOLH1Q04609 750 aa12.3□□□□□ -0.44
CTHRC1-202ENST00000415886 HYAL2Q12891 473 aa12.3□□□□□ -0.44
CTHRC1-202ENST00000415886 CEBPEQ15744 281 aa12.3□□□□□ -0.44
CTHRC1-202ENST00000415886 AP5B1Q2VPB7 878 aa12.3□□□□□ -0.44
CTHRC1-202ENST00000415886 ARHGAP11AQ6P4F7 1023 aa12.3□□□□□ -0.44
CTHRC1-202ENST00000415886 CYP4Z2PQ8N1L4 340 aa12.3□□□□□ -0.44
CTHRC1-202ENST00000415886 CA13Q8N1Q1 262 aa12.3□□□□□ -0.44
CTHRC1-202ENST00000415886 ZFP62Q8NB50 900 aaPredicted RBP12.3□□□□□ -0.44
CTHRC1-202ENST00000415886 CHDHQ8NE62 594 aaPredicted RBP12.3□□□□□ -0.44
CTHRC1-202ENST00000415886 NFAM1Q8NET5 270 aaPredicted RBP12.3□□□□□ -0.44
CTHRC1-202ENST00000415886 OR5M3Q8NGP4 307 aa12.3□□□□□ -0.44
CTHRC1-202ENST00000415886 MS4A6EQ96DS6 147 aa12.3□□□□□ -0.44
CTHRC1-202ENST00000415886 WDR34Q96EX3 536 aa12.3□□□□□ -0.44
CTHRC1-202ENST00000415886 SERINC2Q96SA4 455 aa12.3□□□□□ -0.44
CTHRC1-202ENST00000415886 PAFAH2Q99487 392 aa12.3□□□□□ -0.44
CTHRC1-202ENST00000415886 RHOXF2Q9BQY4 288 aa12.3□□□□□ -0.44
CTHRC1-202ENST00000415886 CCDC77Q9BR77 488 aa12.3□□□□□ -0.44
CTHRC1-202ENST00000415886 FUT8Q9BYC5 575 aa12.3□□□□□ -0.44
CTHRC1-202ENST00000415886 DEFB126Q9BYW3 111 aa12.3□□□□□ -0.44
CTHRC1-202ENST00000415886 DEFB127Q9H1M4 99 aa12.3□□□□□ -0.44
CTHRC1-202ENST00000415886 LIME1Q9H400 295 aa12.3□□□□□ -0.44
CTHRC1-202ENST00000415886 ACTR8Q9H981 624 aa12.3□□□□□ -0.44
CTHRC1-202ENST00000415886 DNAJB12Q9NXW2 375 aaKnown RBP12.3□□□□□ -0.44
CTHRC1-202ENST00000415886 ADGRE2Q9UHX3 823 aa12.3□□□□□ -0.44
CTHRC1-202ENST00000415886 TMCO1Q9UM00 188 aa12.3□□□□□ -0.44
CTHRC1-202ENST00000415886 ZNF469Q96JG9 3925 aaPredicted RBP12.29□□□□□ -0.44
CTHRC1-202ENST00000415886 TRBV11-1A0A0K0K1C0 115 aa12.29□□□□□ -0.44
CTHRC1-202ENST00000415886 EXOC1LA0A1B0GW35 172 aa12.29□□□□□ -0.44
CTHRC1-202ENST00000415886 HMX2A2RU54 273 aa12.29□□□□□ -0.44
CTHRC1-202ENST00000415886 SMIM24O75264 130 aa12.29□□□□□ -0.44
CTHRC1-202ENST00000415886 ALDOAP04075 364 aaKnown RBP12.29□□□□□ -0.44
CTHRC1-202ENST00000415886 SNRPAP09012 282 aaKnown RBP12.29□□□□□ -0.44
CTHRC1-202ENST00000415886 COL6A2P12110 1019 aa12.29□□□□□ -0.44
CTHRC1-202ENST00000415886 SERPINB1P30740 379 aa12.29□□□□□ -0.44
CTHRC1-202ENST00000415886 CASP2P42575 452 aa12.29□□□□□ -0.44
CTHRC1-202ENST00000415886 FOXD4Q12950 439 aaPredicted RBP12.29□□□□□ -0.44
CTHRC1-202ENST00000415886 SLC13A2Q13183 592 aa12.29□□□□□ -0.44
CTHRC1-202ENST00000415886 TSNAXIP1Q2TAA8 658 aa12.29□□□□□ -0.44
CTHRC1-202ENST00000415886 TMEM35AQ53FP2 167 aa12.29□□□□□ -0.44
CTHRC1-202ENST00000415886 ABHD17CQ6PCB6 329 aa12.29□□□□□ -0.44
CTHRC1-202ENST00000415886 QSOX2Q6ZRP7 698 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms