RNA–Protein interactions for RNA: ENST00000415148.6

CD44-206, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-206ENST00000415148 CLEC2DQ9UHP7 191 aa9.34□□□□□ -0.91
CD44-206ENST00000415148 ACSL6Q9UKU0 697 aa9.34□□□□□ -0.91
CD44-206ENST00000415148 MGAT4BQ9UQ53 548 aa9.34□□□□□ -0.91
CD44-206ENST00000415148 WBP11Q9Y2W2 641 aaKnown RBP9.34□□□□□ -0.91
CD44-206ENST00000415148 DENND4CQ5VZ89 1909 aa9.34□□□□□ -0.91
CD44-206ENST00000415148 SLC35F4A4IF30 521 aa9.34□□□□□ -0.91
CD44-206ENST00000415148 RFXAPO00287 272 aa9.34□□□□□ -0.91
CD44-206ENST00000415148 KRT8P05787 483 aa9.34□□□□□ -0.91
CD44-206ENST00000415148 FHP07954 510 aa9.34□□□□□ -0.91
CD44-206ENST00000415148 OSMP13725 252 aa9.34□□□□□ -0.91
CD44-206ENST00000415148 TIMP2P16035 220 aa9.34□□□□□ -0.91
CD44-206ENST00000415148 DDX5P17844 614 aaKnown RBP9.34□□□□□ -0.91
CD44-206ENST00000415148 CNR2P34972 360 aa9.34□□□□□ -0.91
CD44-206ENST00000415148 ETV3P41162 512 aa9.34□□□□□ -0.91
CD44-206ENST00000415148 BDKRB1P46663 353 aa9.34□□□□□ -0.91
CD44-206ENST00000415148 DSTNP60981 165 aa9.34□□□□□ -0.91
CD44-206ENST00000415148 GANABQ14697 944 aaKnown RBP9.34□□□□□ -0.91
CD44-206ENST00000415148 ZNF658BQ4V348 819 aaPredicted RBP9.34□□□□□ -0.91
CD44-206ENST00000415148 SPOUT1Q5T280 376 aaKnown RBP9.34□□□□□ -0.91
CD44-206ENST00000415148 LYPD8Q6UX82 237 aa9.34□□□□□ -0.91
CD44-206ENST00000415148 Q6ZVU0 165 aa9.34□□□□□ -0.91
CD44-206ENST00000415148 OTOP2Q7RTS6 562 aa9.34□□□□□ -0.91
CD44-206ENST00000415148 ABI3BPQ7Z7G0 1075 aa9.34□□□□□ -0.91
CD44-206ENST00000415148 TMC8Q8IU68 726 aa9.34□□□□□ -0.91
CD44-206ENST00000415148 UBE2J2Q8N2K1 259 aa9.34□□□□□ -0.91
CD44-206ENST00000415148 WDR36Q8NI36 951 aaKnown RBP9.34□□□□□ -0.91
CD44-206ENST00000415148 SETD7Q8WTS6 366 aaKnown RBP9.34□□□□□ -0.91
CD44-206ENST00000415148 KLHL6Q8WZ60 621 aa9.34□□□□□ -0.91
CD44-206ENST00000415148 PDXPQ96GD0 296 aa9.34□□□□□ -0.91
CD44-206ENST00000415148 TMEM80Q96HE8 168 aa9.34□□□□□ -0.91
CD44-206ENST00000415148 WDFY2Q96P53 400 aa9.34□□□□□ -0.91
CD44-206ENST00000415148 ZIC5Q96T25 663 aa9.34□□□□□ -0.91
CD44-206ENST00000415148 NMNAT1Q9HAN9 279 aaPredicted RBP9.34□□□□□ -0.91
CD44-206ENST00000415148 SEC14L4Q9UDX3 406 aa9.34□□□□□ -0.91
CD44-206ENST00000415148 MAP4K5Q9Y4K4 846 aa9.34□□□□□ -0.91
CD44-206ENST00000415148 V9GYH0 126 aa9.34□□□□□ -0.91
CD44-206ENST00000415148 A0A0B4J293 547 aa9.33□□□□□ -0.92
CD44-206ENST00000415148 SMIM30A4D0T7 59 aa9.33□□□□□ -0.92
CD44-206ENST00000415148 CAPN5O15484 640 aaPredicted RBP9.33□□□□□ -0.92
CD44-206ENST00000415148 TBX19O60806 448 aa9.33□□□□□ -0.92
CD44-206ENST00000415148 KLHL18O94889 574 aa9.33□□□□□ -0.92
CD44-206ENST00000415148 GBAP04062 536 aa9.33□□□□□ -0.92
CD44-206ENST00000415148 CHRM5P08912 532 aaPredicted RBP9.33□□□□□ -0.92
CD44-206ENST00000415148 FEN1P39748 380 aaKnown RBP9.33□□□□□ -0.92
CD44-206ENST00000415148 PREPP48147 710 aa9.33□□□□□ -0.92
CD44-206ENST00000415148 RORCP51449 518 aa9.33□□□□□ -0.92
CD44-206ENST00000415148 CTSCP53634 463 aa9.33□□□□□ -0.92
CD44-206ENST00000415148 SLBPQ14493 270 aaKnown RBP eCLIP9.33□□□□□ -0.92
CD44-206ENST00000415148 STARD3Q14849 445 aa9.33□□□□□ -0.92
CD44-206ENST00000415148 LEXMQ3ZCV2 418 aa9.33□□□□□ -0.92
CD44-206ENST00000415148 ASTLQ6HA08 431 aaPredicted RBP9.33□□□□□ -0.92
CD44-206ENST00000415148 FAM180BQ6P0A1 224 aa9.33□□□□□ -0.92
CD44-206ENST00000415148 PAQR6Q6TCH4 344 aa9.33□□□□□ -0.92
CD44-206ENST00000415148 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.33□□□□□ -0.92
CD44-206ENST00000415148 DPPA4Q7L190 304 aa9.33□□□□□ -0.92
CD44-206ENST00000415148 REM2Q8IYK8 340 aaPredicted RBP9.33□□□□□ -0.92
CD44-206ENST00000415148 TAGAPQ8N103 731 aa9.33□□□□□ -0.92
CD44-206ENST00000415148 APOBEC4Q8WW27 367 aaKnown RBP9.33□□□□□ -0.92
CD44-206ENST00000415148 CIDECQ96AQ7 238 aaPredicted RBP9.33□□□□□ -0.92
CD44-206ENST00000415148 RNF31Q96EP0 1072 aa9.33□□□□□ -0.92
CD44-206ENST00000415148 LRIG1Q96JA1 1093 aa9.33□□□□□ -0.92
CD44-206ENST00000415148 NECTIN4Q96NY8 510 aa9.33□□□□□ -0.92
CD44-206ENST00000415148 OPALINQ96PE5 141 aa9.33□□□□□ -0.92
CD44-206ENST00000415148 GDF15Q99988 308 aa9.33□□□□□ -0.92
CD44-206ENST00000415148 RSPO3Q9BXY4 272 aaPredicted RBP9.33□□□□□ -0.92
CD44-206ENST00000415148 NLNQ9BYT8 704 aa9.33□□□□□ -0.92
CD44-206ENST00000415148 UCK2Q9BZX2 261 aa9.33□□□□□ -0.92
CD44-206ENST00000415148 HHATLQ9HCP6 504 aa9.33□□□□□ -0.92
CD44-206ENST00000415148 PRM3Q9NNZ6 103 aa9.33□□□□□ -0.92
CD44-206ENST00000415148 A4GALTQ9NPC4 353 aa9.33□□□□□ -0.92
CD44-206ENST00000415148 TIGARQ9NQ88 270 aa9.33□□□□□ -0.92
CD44-206ENST00000415148 ASAH2Q9NR71 780 aa9.33□□□□□ -0.92
CD44-206ENST00000415148 DKK3Q9UBP4 350 aa9.33□□□□□ -0.92
CD44-206ENST00000415148 RAB23Q9ULC3 237 aa9.33□□□□□ -0.92
CD44-206ENST00000415148 TMCC3Q9ULS5 477 aa9.33□□□□□ -0.92
CD44-206ENST00000415148 LSM2Q9Y333 95 aaKnown RBP9.33□□□□□ -0.92
CD44-206ENST00000415148 RPL36Q9Y3U8 105 aaKnown RBP9.33□□□□□ -0.92
CD44-206ENST00000415148 GPSM3Q9Y4H4 160 aa9.33□□□□□ -0.92
CD44-206ENST00000415148 PCM1Q15154 2024 aa9.33□□□□□ -0.92
CD44-206ENST00000415148 PIPSLA2A3N6 862 aa9.32□□□□□ -0.92
CD44-206ENST00000415148 TLR4O00206 839 aa9.32□□□□□ -0.92
CD44-206ENST00000415148 PDE9AO76083 593 aa9.32□□□□□ -0.92
CD44-206ENST00000415148 RECKO95980 971 aa9.32□□□□□ -0.92
CD44-206ENST00000415148 PRKCAP17252 672 aa9.32□□□□□ -0.92
CD44-206ENST00000415148 PSMA1P25786 263 aaKnown RBP9.32□□□□□ -0.92
CD44-206ENST00000415148 OPRD1P41143 372 aa9.32□□□□□ -0.92
CD44-206ENST00000415148 SMIM11AP58511 58 aa9.32□□□□□ -0.92
CD44-206ENST00000415148 TAS2R50P59544 299 aa9.32□□□□□ -0.92
CD44-206ENST00000415148 TBPL1P62380 186 aa9.32□□□□□ -0.92
CD44-206ENST00000415148 HOXC5Q00444 222 aa9.32□□□□□ -0.92
CD44-206ENST00000415148 MC1RQ01726 317 aa9.32□□□□□ -0.92
CD44-206ENST00000415148 OCLNQ16625 522 aa9.32□□□□□ -0.92
CD44-206ENST00000415148 CLPPQ16740 277 aaPredicted RBP9.32□□□□□ -0.92
CD44-206ENST00000415148 PRSS53Q2L4Q9 553 aa9.32□□□□□ -0.92
CD44-206ENST00000415148 TBRG1Q3YBR2 411 aa9.32□□□□□ -0.92
CD44-206ENST00000415148 C12orf73Q69YU5 71 aa9.32□□□□□ -0.92
CD44-206ENST00000415148 TMEM220Q6QAJ8 160 aa9.32□□□□□ -0.92
CD44-206ENST00000415148 NXPE4Q6UWF7 544 aa9.32□□□□□ -0.92
CD44-206ENST00000415148 TMC5Q6UXY8 1006 aa9.32□□□□□ -0.92
CD44-206ENST00000415148 OR9A1PQ8NGU1 263 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms