RNA–Protein interactions for RNA: ENST00000413872.6

PHRF1-202, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-202ENST00000413872 MSANTD3Q96H12 275 aa16.56■□□□□ 0.24
PHRF1-202ENST00000413872 ORAI3Q9BRQ5 295 aa16.56■□□□□ 0.24
PHRF1-202ENST00000413872 HOXD1Q9GZZ0 328 aa16.56■□□□□ 0.24
PHRF1-202ENST00000413872 SNTG1Q9NSN8 517 aa16.56■□□□□ 0.24
PHRF1-202ENST00000413872 A0A075B6Q4 140 aa16.55■□□□□ 0.24
PHRF1-202ENST00000413872 FABP12A6NFH5 140 aa16.55■□□□□ 0.24
PHRF1-202ENST00000413872 RNF13O43567 381 aa16.55■□□□□ 0.24
PHRF1-202ENST00000413872 CASP6P55212 293 aa16.55■□□□□ 0.24
PHRF1-202ENST00000413872 ARHGAP19Q14CB8 494 aa16.55■□□□□ 0.24
PHRF1-202ENST00000413872 TMEM225Q6GV28 225 aa16.55■□□□□ 0.24
PHRF1-202ENST00000413872 CHERPQ8IWX8 916 aaKnown RBP16.55■□□□□ 0.24
PHRF1-202ENST00000413872 POLDIP3Q9BY77 421 aaKnown RBP16.55■□□□□ 0.24
PHRF1-202ENST00000413872 PCTPQ9UKL6 214 aa16.55■□□□□ 0.24
PHRF1-202ENST00000413872 PDLIM1O00151 329 aa16.55■□□□□ 0.24
PHRF1-202ENST00000413872 TLX2O43763 284 aaPredicted RBP16.55■□□□□ 0.24
PHRF1-202ENST00000413872 OR12D2P58182 307 aa16.55■□□□□ 0.24
PHRF1-202ENST00000413872 C6orf120Q7Z4R8 191 aa16.55■□□□□ 0.24
PHRF1-202ENST00000413872 ISCA2Q86U28 154 aa16.55■□□□□ 0.24
PHRF1-202ENST00000413872 GOLM1Q8NBJ4 401 aa16.55■□□□□ 0.24
PHRF1-202ENST00000413872 CDC123O75794 336 aaPredicted RBP16.55■□□□□ 0.24
PHRF1-202ENST00000413872 CSTBP04080 98 aaKnown RBP16.55■□□□□ 0.24
PHRF1-202ENST00000413872 SLC15A1P46059 708 aa16.55■□□□□ 0.24
PHRF1-202ENST00000413872 PPP1R3AQ16821 1122 aa16.55■□□□□ 0.24
PHRF1-202ENST00000413872 KANK2Q63ZY3 851 aa16.55■□□□□ 0.24
PHRF1-202ENST00000413872 PDZD3Q86UT5 571 aa16.55■□□□□ 0.24
PHRF1-202ENST00000413872 NXPE3Q969Y0 559 aa16.55■□□□□ 0.24
PHRF1-202ENST00000413872 GFM1Q96RP9 751 aaKnown RBP16.55■□□□□ 0.24
PHRF1-202ENST00000413872 EXOSC1Q9Y3B2 195 aaKnown RBP16.55■□□□□ 0.24
PHRF1-202ENST00000413872 GRIP1Q9Y3R0 1128 aa16.55■□□□□ 0.24
PHRF1-202ENST00000413872 SCAMP2O15127 329 aaKnown RBP16.55■□□□□ 0.24
PHRF1-202ENST00000413872 IL33O95760 270 aa16.55■□□□□ 0.24
PHRF1-202ENST00000413872 CYP17A1P05093 508 aa16.55■□□□□ 0.24
PHRF1-202ENST00000413872 ARFRP1Q13795 201 aa16.55■□□□□ 0.24
PHRF1-202ENST00000413872 ACOT12Q8WYK0 555 aa16.55■□□□□ 0.24
PHRF1-202ENST00000413872 RELTQ969Z4 430 aa16.55■□□□□ 0.24
PHRF1-202ENST00000413872 OR51I1Q9H343 314 aa16.55■□□□□ 0.24
PHRF1-202ENST00000413872 SEC14L4Q9UDX3 406 aa16.55■□□□□ 0.24
PHRF1-202ENST00000413872 PTBP2Q9UKA9 531 aaKnown RBP16.55■□□□□ 0.24
PHRF1-202ENST00000413872 IVDP26440 423 aa16.54■□□□□ 0.24
PHRF1-202ENST00000413872 MAGEA6P43360 314 aa16.54■□□□□ 0.24
PHRF1-202ENST00000413872 RCAN2Q14206 197 aa16.54■□□□□ 0.24
PHRF1-202ENST00000413872 GRB7Q14451 532 aa16.54■□□□□ 0.24
PHRF1-202ENST00000413872 ARL9Q6T311 187 aa16.54■□□□□ 0.24
PHRF1-202ENST00000413872 FANK1Q8TC84 345 aa16.54■□□□□ 0.24
PHRF1-202ENST00000413872 THEM6Q8WUY1 208 aa16.54■□□□□ 0.24
PHRF1-202ENST00000413872 JPH3Q8WXH2 748 aaPredicted RBP16.54■□□□□ 0.24
PHRF1-202ENST00000413872 BOCQ9BWV1 1114 aa16.54■□□□□ 0.24
PHRF1-202ENST00000413872 RDH14Q9HBH5 336 aa16.54■□□□□ 0.24
PHRF1-202ENST00000413872 PTTG2Q9NZH5 202 aa16.54■□□□□ 0.24
PHRF1-202ENST00000413872 LRRC42Q9Y546 428 aa16.54■□□□□ 0.24
PHRF1-202ENST00000413872 A0A1B0GVI7 797 aa16.54■□□□□ 0.24
PHRF1-202ENST00000413872 METTL21EPA6NDL7 271 aa16.54■□□□□ 0.24
PHRF1-202ENST00000413872 EDN1P05305 212 aa16.54■□□□□ 0.24
PHRF1-202ENST00000413872 MRPL49Q13405 166 aaKnown RBP16.54■□□□□ 0.24
PHRF1-202ENST00000413872 LYSMD4Q5XG99 296 aa16.54■□□□□ 0.24
PHRF1-202ENST00000413872 LCTLQ6UWM7 567 aa16.54■□□□□ 0.24
PHRF1-202ENST00000413872 HLA-CQ95604 372 aa16.54■□□□□ 0.24
PHRF1-202ENST00000413872 NKD1Q969G9 470 aa16.54■□□□□ 0.24
PHRF1-202ENST00000413872 PKP2Q99959 881 aa16.54■□□□□ 0.24
PHRF1-202ENST00000413872 DUSP23Q9BVJ7 150 aa16.54■□□□□ 0.24
PHRF1-202ENST00000413872 ITPAQ9BY32 194 aa16.54■□□□□ 0.24
PHRF1-202ENST00000413872 SLC16A8O95907 504 aa16.54■□□□□ 0.24
PHRF1-202ENST00000413872 CD63P08962 238 aa16.54■□□□□ 0.24
PHRF1-202ENST00000413872 F8A1P23610 371 aa16.54■□□□□ 0.24
PHRF1-202ENST00000413872 KDELR2P33947 212 aa16.54■□□□□ 0.24
PHRF1-202ENST00000413872 ZNF84P51523 738 aa16.54■□□□□ 0.24
PHRF1-202ENST00000413872 TAS2R38P59533 333 aa16.54■□□□□ 0.24
PHRF1-202ENST00000413872 CBX3Q13185 183 aa16.54■□□□□ 0.24
PHRF1-202ENST00000413872 ELOAQ14241 798 aaKnown RBP16.54■□□□□ 0.24
PHRF1-202ENST00000413872 Q6ZSR6 202 aa16.54■□□□□ 0.24
PHRF1-202ENST00000413872 GALNTL5Q7Z4T8 443 aa16.54■□□□□ 0.24
PHRF1-202ENST00000413872 MARCH9Q86YJ5 346 aa16.54■□□□□ 0.24
PHRF1-202ENST00000413872 MINDY1Q8N5J2 469 aa16.54■□□□□ 0.24
PHRF1-202ENST00000413872 VN1R2Q8NFZ6 395 aa16.54■□□□□ 0.24
PHRF1-202ENST00000413872 SETD6Q8TBK2 473 aa16.54■□□□□ 0.24
PHRF1-202ENST00000413872 SLC45A3Q96JT2 553 aa16.54■□□□□ 0.24
PHRF1-202ENST00000413872 ZNF304Q9HCX3 659 aa16.54■□□□□ 0.24
PHRF1-202ENST00000413872 HTR1AP08908 422 aa16.54■□□□□ 0.24
PHRF1-202ENST00000413872 BLOC1S3Q6QNY0 202 aa16.54■□□□□ 0.24
PHRF1-202ENST00000413872 LIPIQ6XZB0 460 aa16.54■□□□□ 0.24
PHRF1-202ENST00000413872 AKAP14Q86UN6 197 aa16.54■□□□□ 0.24
PHRF1-202ENST00000413872 SERINC2Q96SA4 455 aa16.54■□□□□ 0.24
PHRF1-202ENST00000413872 BRF2Q9HAW0 419 aa16.54■□□□□ 0.24
PHRF1-202ENST00000413872 ARNT2Q9HBZ2 717 aa16.54■□□□□ 0.24
PHRF1-202ENST00000413872 ANKMY1Q9P2S6 941 aa16.54■□□□□ 0.24
PHRF1-202ENST00000413872 ZNF451Q9Y4E5 1061 aa16.54■□□□□ 0.24
PHRF1-202ENST00000413872 ACOX3O15254 700 aa16.53■□□□□ 0.24
PHRF1-202ENST00000413872 SMAD6O43541 496 aaKnown RBP16.53■□□□□ 0.24
PHRF1-202ENST00000413872 LINGO2Q7L985 606 aa16.53■□□□□ 0.24
PHRF1-202ENST00000413872 OR6C4Q8NGE1 309 aa16.53■□□□□ 0.24
PHRF1-202ENST00000413872 SCGB3A2Q96PL1 93 aa16.53■□□□□ 0.24
PHRF1-202ENST00000413872 PIP5K1AQ99755 562 aa16.53■□□□□ 0.24
PHRF1-202ENST00000413872 NAA11Q9BSU3 229 aaPredicted RBP16.53■□□□□ 0.24
PHRF1-202ENST00000413872 NPIPA2E9PIF3 369 aa16.53■□□□□ 0.24
PHRF1-202ENST00000413872 NPIPA3F8WFD2 350 aa16.53■□□□□ 0.24
PHRF1-202ENST00000413872 GPR37L1O60883 481 aa16.53■□□□□ 0.24
PHRF1-202ENST00000413872 MT-ND5P03915 603 aa16.53■□□□□ 0.24
PHRF1-202ENST00000413872 ATF6P18850 670 aa16.53■□□□□ 0.24
PHRF1-202ENST00000413872 RPS3AP61247 264 aaKnown RBP16.53■□□□□ 0.24
PHRF1-202ENST00000413872 KCTD18Q6PI47 426 aaPredicted RBP16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms