RNA–Protein interactions for RNA: ENST00000413574.6

CSNK1E-206, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5 BASIC

Gene CSNK1E, Length 1,631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-206ENST00000413574 FCRL1Q96LA6 429 aa28.75■■■□□ 2.19
CSNK1E-206ENST00000413574 MRPS33Q9Y291 106 aaKnown RBP28.75■■■□□ 2.19
CSNK1E-206ENST00000413574 CROCCQ5TZA2 2017 aa28.74■■■□□ 2.19
CSNK1E-206ENST00000413574 PGRMC2O15173 223 aa28.74■■■□□ 2.19
CSNK1E-206ENST00000413574 IL3P08700 152 aa28.74■■■□□ 2.19
CSNK1E-206ENST00000413574 MMP11P24347 488 aa28.74■■■□□ 2.19
CSNK1E-206ENST00000413574 SLC9B1Q4ZJI4 515 aa28.74■■■□□ 2.19
CSNK1E-206ENST00000413574 QSOX2Q6ZRP7 698 aa28.74■■■□□ 2.19
CSNK1E-206ENST00000413574 OR4N5Q8IXE1 308 aa28.74■■■□□ 2.19
CSNK1E-206ENST00000413574 PLPP5Q8NEB5 264 aa28.74■■■□□ 2.19
CSNK1E-206ENST00000413574 CRELD1Q96HD1 420 aa28.74■■■□□ 2.19
CSNK1E-206ENST00000413574 EGLN2Q96KS0 407 aa28.74■■■□□ 2.19
CSNK1E-206ENST00000413574 PRDM9Q9NQV7 894 aa28.74■■■□□ 2.19
CSNK1E-206ENST00000413574 PTPRQQ9UMZ3 2332 aa28.74■■■□□ 2.19
CSNK1E-206ENST00000413574 TRPC5OSA6NMA1 111 aa28.73■■■□□ 2.19
CSNK1E-206ENST00000413574 CLDN4O14493 209 aa28.73■■■□□ 2.19
CSNK1E-206ENST00000413574 TLX1P31314 330 aaPredicted RBP28.73■■■□□ 2.19
CSNK1E-206ENST00000413574 TMPRSS3P57727 454 aa28.73■■■□□ 2.19
CSNK1E-206ENST00000413574 MC1RQ01726 317 aa28.73■■■□□ 2.19
CSNK1E-206ENST00000413574 ID2Q02363 134 aa28.73■■■□□ 2.19
CSNK1E-206ENST00000413574 NSDHLQ15738 373 aa28.73■■■□□ 2.19
CSNK1E-206ENST00000413574 SCUBE1Q8IWY4 988 aa28.73■■■□□ 2.19
CSNK1E-206ENST00000413574 ZSCAN1Q8NBB4 408 aa28.73■■■□□ 2.19
CSNK1E-206ENST00000413574 CCDC134Q9H6E4 229 aa28.73■■■□□ 2.19
CSNK1E-206ENST00000413574 C5AR2Q9P296 337 aa28.73■■■□□ 2.19
CSNK1E-206ENST00000413574 HEY2Q9UBP5 337 aa28.73■■■□□ 2.19
CSNK1E-206ENST00000413574 BAIAP2L1Q9UHR4 511 aa28.73■■■□□ 2.19
CSNK1E-206ENST00000413574 CLDN16Q9Y5I7 305 aa28.73■■■□□ 2.19
CSNK1E-206ENST00000413574 SOCS6O14544 535 aa28.72■■■□□ 2.19
CSNK1E-206ENST00000413574 PRR35P0CG20 571 aa28.72■■■□□ 2.19
CSNK1E-206ENST00000413574 C8orf89P0DMQ9 161 aa28.72■■■□□ 2.19
CSNK1E-206ENST00000413574 SDC1P18827 310 aa28.72■■■□□ 2.19
CSNK1E-206ENST00000413574 HSD17B7P56937 341 aa28.72■■■□□ 2.19
CSNK1E-206ENST00000413574 TRA2BP62995 288 aaKnown RBP28.72■■■□□ 2.19
CSNK1E-206ENST00000413574 ZNF763Q0D2J5 394 aa28.72■■■□□ 2.19
CSNK1E-206ENST00000413574 CDC20Q12834 499 aa28.72■■■□□ 2.19
CSNK1E-206ENST00000413574 LARP4Q71RC2 724 aaKnown RBP eCLIP28.72■■■□□ 2.19
CSNK1E-206ENST00000413574 AMER2Q8N7J2 671 aa28.72■■■□□ 2.19
CSNK1E-206ENST00000413574 FAM53CQ9NYF3 392 aa28.72■■■□□ 2.19
CSNK1E-206ENST00000413574 TMED5Q9Y3A6 229 aa28.72■■■□□ 2.19
CSNK1E-206ENST00000413574 K7ENP7 123 aa28.72■■■□□ 2.19
CSNK1E-206ENST00000413574 CTNSO60931 367 aa28.72■■■□□ 2.19
CSNK1E-206ENST00000413574 BCKDHAP12694 445 aa28.72■■■□□ 2.19
CSNK1E-206ENST00000413574 INO80CQ6PI98 192 aaPredicted RBP28.72■■■□□ 2.19
CSNK1E-206ENST00000413574 TMEM205Q6UW68 189 aa28.72■■■□□ 2.19
CSNK1E-206ENST00000413574 KIRREL2Q6UWL6 708 aa28.72■■■□□ 2.19
CSNK1E-206ENST00000413574 MRGPREQ86SM8 312 aa28.72■■■□□ 2.19
CSNK1E-206ENST00000413574 RAB43Q86YS6 212 aa28.72■■■□□ 2.19
CSNK1E-206ENST00000413574 CLHC1Q8NHS4 586 aa28.72■■■□□ 2.19
CSNK1E-206ENST00000413574 METTL21AQ8WXB1 218 aa28.72■■■□□ 2.19
CSNK1E-206ENST00000413574 ANKRD9Q96BM1 317 aaPredicted RBP28.72■■■□□ 2.19
CSNK1E-206ENST00000413574 MMACHCQ9Y4U1 282 aa28.72■■■□□ 2.19
CSNK1E-206ENST00000413574 USP24Q9UPU5 2620 aa28.72■■■□□ 2.19
CSNK1E-206ENST00000413574 IGHV3-20A0A0C4DH32 117 aa28.71■■■□□ 2.19
CSNK1E-206ENST00000413574 MASP2O00187 686 aa28.71■■■□□ 2.19
CSNK1E-206ENST00000413574 FGF17O60258 216 aa28.71■■■□□ 2.19
CSNK1E-206ENST00000413574 GUCY1B2O75343 617 aa28.71■■■□□ 2.19
CSNK1E-206ENST00000413574 VIMP08670 466 aaKnown RBP28.71■■■□□ 2.19
CSNK1E-206ENST00000413574 ALDH9A1P49189 494 aa28.71■■■□□ 2.19
CSNK1E-206ENST00000413574 UCNP55089 124 aa28.71■■■□□ 2.19
CSNK1E-206ENST00000413574 CXADRP78310 365 aa28.71■■■□□ 2.19
CSNK1E-206ENST00000413574 EEF1A2Q05639 463 aaKnown RBP28.71■■■□□ 2.19
CSNK1E-206ENST00000413574 VAC14Q08AM6 782 aa28.71■■■□□ 2.19
CSNK1E-206ENST00000413574 ATP1A4Q13733 1029 aa28.71■■■□□ 2.19
CSNK1E-206ENST00000413574 ST3GAL2Q16842 350 aa28.71■■■□□ 2.19
CSNK1E-206ENST00000413574 IL23RQ5VWK5 629 aa28.71■■■□□ 2.19
CSNK1E-206ENST00000413574 ANKRD37Q7Z713 158 aa28.71■■■□□ 2.19
CSNK1E-206ENST00000413574 PUM2Q8TB72 1066 aaKnown RBP eCLIP28.71■■■□□ 2.19
CSNK1E-206ENST00000413574 TSSK3Q96PN8 268 aa28.71■■■□□ 2.19
CSNK1E-206ENST00000413574 WDR41Q9HAD4 459 aa28.71■■■□□ 2.19
CSNK1E-206ENST00000413574 FGFR1OP2Q9NVK5 253 aa28.71■■■□□ 2.19
CSNK1E-206ENST00000413574 PCDHA9Q9Y5H5 950 aa28.71■■■□□ 2.19
CSNK1E-206ENST00000413574 IGKV3D-11A0A0A0MRZ8 115 aa28.7■■■□□ 2.19
CSNK1E-206ENST00000413574 DIAPH2O60879 1101 aa28.7■■■□□ 2.19
CSNK1E-206ENST00000413574 IGHEP01854 428 aa28.7■■■□□ 2.19
CSNK1E-206ENST00000413574 C2orf80Q0P641 193 aa28.7■■■□□ 2.19
CSNK1E-206ENST00000413574 EPGNQ6UW88 154 aa28.7■■■□□ 2.19
CSNK1E-206ENST00000413574 LIX1Q8N485 282 aa28.7■■■□□ 2.19
CSNK1E-206ENST00000413574 DNAJB14Q8TBM8 379 aa28.7■■■□□ 2.19
CSNK1E-206ENST00000413574 OR52B2Q96RD2 323 aa28.7■■■□□ 2.19
CSNK1E-206ENST00000413574 POLR3GO15318 223 aaPredicted RBP28.69■■■□□ 2.18
CSNK1E-206ENST00000413574 PPP2R1BP30154 601 aa28.69■■■□□ 2.18
CSNK1E-206ENST00000413574 AQP5P55064 265 aa28.69■■■□□ 2.18
CSNK1E-206ENST00000413574 FOLH1Q04609 750 aa28.69■■■□□ 2.18
CSNK1E-206ENST00000413574 EMX2Q04743 252 aa28.69■■■□□ 2.18
CSNK1E-206ENST00000413574 FAM180BQ6P0A1 224 aa28.69■■■□□ 2.18
CSNK1E-206ENST00000413574 TMEM132CQ8N3T6 1108 aa28.69■■■□□ 2.18
CSNK1E-206ENST00000413574 TANKQ92844 425 aa28.69■■■□□ 2.18
CSNK1E-206ENST00000413574 GFM2Q969S9 779 aaKnown RBP28.69■■■□□ 2.18
CSNK1E-206ENST00000413574 MAELQ96JY0 434 aaKnown RBP28.69■■■□□ 2.18
CSNK1E-206ENST00000413574 MYNNQ9NPC7 610 aa28.69■■■□□ 2.18
CSNK1E-206ENST00000413574 P4HTMQ9NXG6 502 aa28.69■■■□□ 2.18
CSNK1E-206ENST00000413574 EXO1Q9UQ84 846 aaKnown RBP28.69■■■□□ 2.18
CSNK1E-206ENST00000413574 A0A1W2PS29 197 aa28.69■■■□□ 2.18
CSNK1E-206ENST00000413574 C1orf226A1L170 272 aa28.69■■■□□ 2.18
CSNK1E-206ENST00000413574 VPS4BO75351 444 aa28.69■■■□□ 2.18
CSNK1E-206ENST00000413574 ALOX15P16050 662 aaPredicted RBP28.69■■■□□ 2.18
CSNK1E-206ENST00000413574 CRTC2Q53ET0 693 aaPredicted RBP28.69■■■□□ 2.18
CSNK1E-206ENST00000413574 NXNQ6DKJ4 435 aa28.69■■■□□ 2.18
CSNK1E-206ENST00000413574 OR52E8Q6IFG1 317 aa28.69■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms