RNA–Protein interactions for RNA: ENST00000413186.6

SYNE1-211, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 4,860 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-211ENST00000413186 LETMD1Q6P1Q0 360 aa8.14□□□□□ -1.11
SYNE1-211ENST00000413186 B3GNT6Q6ZMB0 384 aa8.14□□□□□ -1.11
SYNE1-211ENST00000413186 CYP4Z2PQ8N1L4 340 aa8.14□□□□□ -1.11
SYNE1-211ENST00000413186 GPR151Q8TDV0 419 aa8.14□□□□□ -1.11
SYNE1-211ENST00000413186 LRRC58Q96CX6 371 aa8.14□□□□□ -1.11
SYNE1-211ENST00000413186 ELF4Q99607 663 aaPredicted RBP8.14□□□□□ -1.11
SYNE1-211ENST00000413186 SLC35A5Q9BS91 424 aa8.14□□□□□ -1.11
SYNE1-211ENST00000413186 EGFL7Q9UHF1 273 aa8.14□□□□□ -1.11
SYNE1-211ENST00000413186 LRRC42Q9Y546 428 aa8.14□□□□□ -1.11
SYNE1-211ENST00000413186 SPTY2D1-AS1A0A0U1RR47 76 aa8.14□□□□□ -1.11
SYNE1-211ENST00000413186 FEZF1A0PJY2 475 aa8.14□□□□□ -1.11
SYNE1-211ENST00000413186 NDUFB5O43674 189 aa8.14□□□□□ -1.11
SYNE1-211ENST00000413186 GMFGO60234 142 aa8.14□□□□□ -1.11
SYNE1-211ENST00000413186 OR6A2O95222 327 aa8.14□□□□□ -1.11
SYNE1-211ENST00000413186 COL9A1P20849 921 aa8.14□□□□□ -1.11
SYNE1-211ENST00000413186 IL12BP29460 328 aa8.14□□□□□ -1.11
SYNE1-211ENST00000413186 LTBRP36941 435 aa8.14□□□□□ -1.11
SYNE1-211ENST00000413186 GRK6P43250 576 aa8.14□□□□□ -1.11
SYNE1-211ENST00000413186 RHAGQ02094 409 aa8.14□□□□□ -1.11
SYNE1-211ENST00000413186 CDKN3Q16667 212 aa8.14□□□□□ -1.11
SYNE1-211ENST00000413186 C18orf21Q32NC0 220 aaPredicted RBP8.14□□□□□ -1.11
SYNE1-211ENST00000413186 SPANXN2Q5MJ10 180 aa8.14□□□□□ -1.11
SYNE1-211ENST00000413186 KLHDC8BQ8IXV7 354 aa8.14□□□□□ -1.11
SYNE1-211ENST00000413186 FBXL6Q8N531 539 aa8.14□□□□□ -1.11
SYNE1-211ENST00000413186 PHF10Q8WUB8 498 aaKnown RBP8.14□□□□□ -1.11
SYNE1-211ENST00000413186 CAPSLQ8WWF8 208 aa8.14□□□□□ -1.11
SYNE1-211ENST00000413186 NMD3Q96D46 503 aaKnown RBP8.14□□□□□ -1.11
SYNE1-211ENST00000413186 TCTN2Q96GX1 697 aa8.14□□□□□ -1.11
SYNE1-211ENST00000413186 NSMCE3Q96MG7 304 aa8.14□□□□□ -1.11
SYNE1-211ENST00000413186 PFDN5Q99471 154 aa8.14□□□□□ -1.11
SYNE1-211ENST00000413186 CMKLR1Q99788 373 aa8.14□□□□□ -1.11
SYNE1-211ENST00000413186 FNDC11Q9BVV2 318 aa8.14□□□□□ -1.11
SYNE1-211ENST00000413186 SEMA6AQ9H2E6 1030 aa8.14□□□□□ -1.11
SYNE1-211ENST00000413186 ZMAT5Q9UDW3 170 aaKnown RBP8.14□□□□□ -1.11
SYNE1-211ENST00000413186 PRODH2Q9UF12 536 aa8.14□□□□□ -1.11
SYNE1-211ENST00000413186 OTOL1A6NHN0 477 aaPredicted RBP8.14□□□□□ -1.11
SYNE1-211ENST00000413186 CHP2O43745 196 aa8.14□□□□□ -1.11
SYNE1-211ENST00000413186 AHCYL1O43865 530 aa8.14□□□□□ -1.11
SYNE1-211ENST00000413186 CEACAM5P06731 702 aa8.14□□□□□ -1.11
SYNE1-211ENST00000413186 HEXBP07686 556 aa8.14□□□□□ -1.11
SYNE1-211ENST00000413186 RPS9P46781 194 aaKnown RBP8.14□□□□□ -1.11
SYNE1-211ENST00000413186 INHBCP55103 352 aa8.14□□□□□ -1.11
SYNE1-211ENST00000413186 RBBP4Q09028 425 aa8.14□□□□□ -1.11
SYNE1-211ENST00000413186 CMPK2Q5EBM0 449 aa8.14□□□□□ -1.11
SYNE1-211ENST00000413186 PYHIN1Q6K0P9 492 aa8.14□□□□□ -1.11
SYNE1-211ENST00000413186 OR2L5Q8NG80 312 aa8.14□□□□□ -1.11
SYNE1-211ENST00000413186 OR56A3Q8NH54 315 aa8.14□□□□□ -1.11
SYNE1-211ENST00000413186 OR10A6Q8NH74 314 aa8.14□□□□□ -1.11
SYNE1-211ENST00000413186 MAGEE2Q8TD90 523 aaPredicted RBP8.14□□□□□ -1.11
SYNE1-211ENST00000413186 MRPL48Q96GC5 212 aaKnown RBP8.14□□□□□ -1.11
SYNE1-211ENST00000413186 SERINC2Q96SA4 455 aa8.14□□□□□ -1.11
SYNE1-211ENST00000413186 SLC30A3Q99726 388 aa8.14□□□□□ -1.11
SYNE1-211ENST00000413186 CD320Q9NPF0 282 aa8.14□□□□□ -1.11
SYNE1-211ENST00000413186 H0Y8X5 98 aa8.14□□□□□ -1.11
SYNE1-211ENST00000413186 ECDO95905 644 aaPredicted RBP8.14□□□□□ -1.11
SYNE1-211ENST00000413186 CST1P01037 141 aa8.14□□□□□ -1.11
SYNE1-211ENST00000413186 POU1F1P28069 291 aa8.14□□□□□ -1.11
SYNE1-211ENST00000413186 DGKQP52824 942 aa8.14□□□□□ -1.11
SYNE1-211ENST00000413186 DIO3P55073 304 aa8.14□□□□□ -1.11
SYNE1-211ENST00000413186 TXNL4AP83876 142 aaKnown RBP8.14□□□□□ -1.11
SYNE1-211ENST00000413186 ZXDAP98168 799 aa8.14□□□□□ -1.11
SYNE1-211ENST00000413186 ABHD18Q0P651 414 aa8.14□□□□□ -1.11
SYNE1-211ENST00000413186 C1DQ13901 141 aaKnown RBP8.14□□□□□ -1.11
SYNE1-211ENST00000413186 ZMYND11Q15326 602 aa8.14□□□□□ -1.11
SYNE1-211ENST00000413186 EIPR1Q53HC9 387 aa8.14□□□□□ -1.11
SYNE1-211ENST00000413186 OGFOD2Q6N063 350 aa8.14□□□□□ -1.11
SYNE1-211ENST00000413186 CROCCP3Q8IVE0 287 aa8.14□□□□□ -1.11
SYNE1-211ENST00000413186 MCATQ8IVS2 390 aaKnown RBP8.14□□□□□ -1.11
SYNE1-211ENST00000413186 MZB1Q8WU39 189 aa8.14□□□□□ -1.11
SYNE1-211ENST00000413186 RORBQ92753 470 aa8.14□□□□□ -1.11
SYNE1-211ENST00000413186 DGCR14Q96DF8 476 aaKnown RBP8.14□□□□□ -1.11
SYNE1-211ENST00000413186 VWCEQ96DN2 955 aa8.14□□□□□ -1.11
SYNE1-211ENST00000413186 PTCHD1Q96NR3 888 aa8.14□□□□□ -1.11
SYNE1-211ENST00000413186 C1QTNF1Q9BXJ1 281 aa8.14□□□□□ -1.11
SYNE1-211ENST00000413186 YTHDF1Q9BYJ9 559 aaKnown RBP8.14□□□□□ -1.11
SYNE1-211ENST00000413186 C6orf62Q9GZU0 229 aaPredicted RBP8.14□□□□□ -1.11
SYNE1-211ENST00000413186 TMEM27Q9HBJ8 222 aa8.14□□□□□ -1.11
SYNE1-211ENST00000413186 Q9N2J8 555 aa8.14□□□□□ -1.11
SYNE1-211ENST00000413186 DMRT3Q9NQL9 472 aa8.14□□□□□ -1.11
SYNE1-211ENST00000413186 C1GALT1Q9NS00 363 aa8.14□□□□□ -1.11
SYNE1-211ENST00000413186 HCN3Q9P1Z3 774 aa8.14□□□□□ -1.11
SYNE1-211ENST00000413186 P2RX2Q9UBL9 471 aa8.14□□□□□ -1.11
SYNE1-211ENST00000413186 IGHV1OR15-9A0A0B4J2B8 117 aa8.13□□□□□ -1.11
SYNE1-211ENST00000413186 SLC9B1P1A6NJY1 282 aa8.13□□□□□ -1.11
SYNE1-211ENST00000413186 GFYI3L273 518 aa8.13□□□□□ -1.11
SYNE1-211ENST00000413186 POLR1CO15160 346 aaPredicted RBP8.13□□□□□ -1.11
SYNE1-211ENST00000413186 ASNA1O43681 348 aa8.13□□□□□ -1.11
SYNE1-211ENST00000413186 KHDRBS3O75525 346 aaKnown RBP8.13□□□□□ -1.11
SYNE1-211ENST00000413186 SLC25A12O75746 678 aa8.13□□□□□ -1.11
SYNE1-211ENST00000413186 BCAS2O75934 225 aaPredicted RBP8.13□□□□□ -1.11
SYNE1-211ENST00000413186 HIST1H2ABP04908 130 aa8.13□□□□□ -1.11
SYNE1-211ENST00000413186 JUNP05412 331 aaKnown RBP8.13□□□□□ -1.11
SYNE1-211ENST00000413186 IL3P08700 152 aa8.13□□□□□ -1.11
SYNE1-211ENST00000413186 CASRP41180 1078 aa8.13□□□□□ -1.11
SYNE1-211ENST00000413186 MAZP56270 477 aaKnown RBP8.13□□□□□ -1.11
SYNE1-211ENST00000413186 DSTNP60981 165 aa8.13□□□□□ -1.11
SYNE1-211ENST00000413186 E2F1Q01094 437 aa8.13□□□□□ -1.11
SYNE1-211ENST00000413186 NRF1Q16656 503 aa8.13□□□□□ -1.11
SYNE1-211ENST00000413186 TIMM50Q3ZCQ8 353 aa8.13□□□□□ -1.11
SYNE1-211ENST00000413186 TTLL10Q6ZVT0 673 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms