RNA–Protein interactions for RNA: ENST00000411591.5

PCYT1A-202, Transcript of phosphate cytidylyltransferase 1, choline, alpha, humanhuman

TSL 3

Gene PCYT1A, Length 1,084 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCYT1A-202ENST00000411591 ARL15Q9NXU5 204 aa13.16□□□□□ -0.3
PCYT1A-202ENST00000411591 MRPS33Q9Y291 106 aaKnown RBP13.16□□□□□ -0.3
PCYT1A-202ENST00000411591 KIAA1549Q9HCM3 1950 aa13.16□□□□□ -0.3
PCYT1A-202ENST00000411591 NCKAP5O14513 1909 aa13.15□□□□□ -0.3
PCYT1A-202ENST00000411591 A0A0G2JN53 185 aa13.15□□□□□ -0.3
PCYT1A-202ENST00000411591 MBD3L4A6NDZ8 208 aaPredicted RBP13.15□□□□□ -0.3
PCYT1A-202ENST00000411591 MBD3L3A6NE82 208 aaPredicted RBP13.15□□□□□ -0.3
PCYT1A-202ENST00000411591 MBD3L5A6NJ08 208 aaPredicted RBP13.15□□□□□ -0.3
PCYT1A-202ENST00000411591 CD8B2A6NJW9 211 aa13.15□□□□□ -0.3
PCYT1A-202ENST00000411591 EEF1E1-BLOC1S5C9J1V9 151 aa13.15□□□□□ -0.3
PCYT1A-202ENST00000411591 EEF1E1O43324 174 aaKnown RBP13.15□□□□□ -0.3
PCYT1A-202ENST00000411591 CTNSO60931 367 aa13.15□□□□□ -0.3
PCYT1A-202ENST00000411591 CRLF1O75462 422 aa13.15□□□□□ -0.3
PCYT1A-202ENST00000411591 IL18BPO95998 194 aa13.15□□□□□ -0.3
PCYT1A-202ENST00000411591 OPRM1P35372 400 aa13.15□□□□□ -0.3
PCYT1A-202ENST00000411591 AGFG1P52594 562 aaKnown RBP13.15□□□□□ -0.3
PCYT1A-202ENST00000411591 STXBP1P61764 594 aaKnown RBP13.15□□□□□ -0.3
PCYT1A-202ENST00000411591 KCNJ2P63252 427 aa13.15□□□□□ -0.3
PCYT1A-202ENST00000411591 TBL3Q12788 808 aaKnown RBP13.15□□□□□ -0.3
PCYT1A-202ENST00000411591 DUSP8Q13202 625 aa13.15□□□□□ -0.3
PCYT1A-202ENST00000411591 RBBP5Q15291 538 aaKnown RBP13.15□□□□□ -0.3
PCYT1A-202ENST00000411591 CCNG2Q16589 344 aa13.15□□□□□ -0.3
PCYT1A-202ENST00000411591 PRAMEF20Q5VT98 475 aa13.15□□□□□ -0.3
PCYT1A-202ENST00000411591 CASC4Q6P4E1 433 aa13.15□□□□□ -0.3
PCYT1A-202ENST00000411591 PAQR3Q6TCH7 311 aa13.15□□□□□ -0.3
PCYT1A-202ENST00000411591 NXPE4Q6UWF7 544 aa13.15□□□□□ -0.3
PCYT1A-202ENST00000411591 TMPRSS11BQ86T26 416 aa13.15□□□□□ -0.3
PCYT1A-202ENST00000411591 CAND1Q86VP6 1230 aaKnown RBP13.15□□□□□ -0.3
PCYT1A-202ENST00000411591 MBD3L2Q8NHZ7 208 aaPredicted RBP13.15□□□□□ -0.3
PCYT1A-202ENST00000411591 NUBPLQ8TB37 319 aa13.15□□□□□ -0.3
PCYT1A-202ENST00000411591 ZNF721Q8TF20 911 aa13.15□□□□□ -0.3
PCYT1A-202ENST00000411591 ATL1Q8WXF7 558 aa13.15□□□□□ -0.3
PCYT1A-202ENST00000411591 ISL2Q96A47 359 aa13.15□□□□□ -0.3
PCYT1A-202ENST00000411591 MS4A6EQ96DS6 147 aa13.15□□□□□ -0.3
PCYT1A-202ENST00000411591 FAR2Q96K12 515 aa13.15□□□□□ -0.3
PCYT1A-202ENST00000411591 NDNQ99608 321 aa13.15□□□□□ -0.3
PCYT1A-202ENST00000411591 ALOXE3Q9BYJ1 711 aa13.15□□□□□ -0.3
PCYT1A-202ENST00000411591 FBXO5Q9UKT4 447 aa13.15□□□□□ -0.3
PCYT1A-202ENST00000411591 C15orf38-AP3S2A0A0A6YYH1 394 aa13.14□□□□□ -0.31
PCYT1A-202ENST00000411591 MYOCOSA0A1B0GUC4 107 aa13.14□□□□□ -0.31
PCYT1A-202ENST00000411591 MAGEB16A2A368 324 aa13.14□□□□□ -0.31
PCYT1A-202ENST00000411591 SH3D21A4FU49 640 aa13.14□□□□□ -0.31
PCYT1A-202ENST00000411591 ERI3O43414 337 aaKnown RBP13.14□□□□□ -0.31
PCYT1A-202ENST00000411591 B3GALT2O43825 422 aa13.14□□□□□ -0.31
PCYT1A-202ENST00000411591 HNRNPH1P31943 449 aaKnown RBP13.14□□□□□ -0.31
PCYT1A-202ENST00000411591 ASPHQ12797 758 aa13.14□□□□□ -0.31
PCYT1A-202ENST00000411591 KCTD19Q17RG1 926 aaPredicted RBP13.14□□□□□ -0.31
PCYT1A-202ENST00000411591 PHC2Q8IXK0 858 aa13.14□□□□□ -0.31
PCYT1A-202ENST00000411591 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.14□□□□□ -0.31
PCYT1A-202ENST00000411591 KLHDC8AQ8IYD2 350 aa13.14□□□□□ -0.31
PCYT1A-202ENST00000411591 PM20D2Q8IYS1 436 aa13.14□□□□□ -0.31
PCYT1A-202ENST00000411591 RASGEF1CQ8N431 466 aa13.14□□□□□ -0.31
PCYT1A-202ENST00000411591 GPATCH11Q8N954 259 aa13.14□□□□□ -0.31
PCYT1A-202ENST00000411591 SPACA9Q96E40 222 aaPredicted RBP13.14□□□□□ -0.31
PCYT1A-202ENST00000411591 LINGO1Q96FE5 620 aa13.14□□□□□ -0.31
PCYT1A-202ENST00000411591 DAPP1Q9UN19 280 aa13.14□□□□□ -0.31
PCYT1A-202ENST00000411591 DYRK1BQ9Y463 629 aa13.14□□□□□ -0.31
PCYT1A-202ENST00000411591 CHCHD2Q9Y6H1 151 aaPredicted RBP13.14□□□□□ -0.31
PCYT1A-202ENST00000411591 CAPN6Q9Y6Q1 641 aa13.14□□□□□ -0.31
PCYT1A-202ENST00000411591 LRIT2A6NDA9 550 aa13.13□□□□□ -0.31
PCYT1A-202ENST00000411591 C17orf105B2RV13 164 aa13.13□□□□□ -0.31
PCYT1A-202ENST00000411591 CES2O00748 559 aa13.13□□□□□ -0.31
PCYT1A-202ENST00000411591 ETHE1O95571 254 aa13.13□□□□□ -0.31
PCYT1A-202ENST00000411591 GUCA1CO95843 209 aa13.13□□□□□ -0.31
PCYT1A-202ENST00000411591 TBX6O95947 436 aaPredicted RBP13.13□□□□□ -0.31
PCYT1A-202ENST00000411591 C8BP07358 591 aa13.13□□□□□ -0.31
PCYT1A-202ENST00000411591 BMP7P18075 431 aa13.13□□□□□ -0.31
PCYT1A-202ENST00000411591 SAT1P21673 171 aa13.13□□□□□ -0.31
PCYT1A-202ENST00000411591 MAGEA6P43360 314 aa13.13□□□□□ -0.31
PCYT1A-202ENST00000411591 LIM2P55344 173 aa13.13□□□□□ -0.31
PCYT1A-202ENST00000411591 SF3B4Q15427 424 aaKnown RBP eCLIP13.13□□□□□ -0.318e-7■■■■■ 32.7
PCYT1A-202ENST00000411591 THOC6Q86W42 341 aaKnown RBP13.13□□□□□ -0.31
PCYT1A-202ENST00000411591 PPP1R14CQ8TAE6 165 aa13.13□□□□□ -0.31
PCYT1A-202ENST00000411591 SLC22A8Q8TCC7 542 aa13.13□□□□□ -0.31
PCYT1A-202ENST00000411591 CALML6Q8TD86 181 aa13.13□□□□□ -0.31
PCYT1A-202ENST00000411591 NTNG2Q96CW9 530 aa13.13□□□□□ -0.31
PCYT1A-202ENST00000411591 RBM24Q9BX46 236 aaKnown RBP13.13□□□□□ -0.31
PCYT1A-202ENST00000411591 C20orf96Q9NUD7 363 aaPredicted RBP13.13□□□□□ -0.31
PCYT1A-202ENST00000411591 GALNT8Q9NY28 637 aa13.13□□□□□ -0.31
PCYT1A-202ENST00000411591 TAS2R13Q9NYV9 303 aa13.13□□□□□ -0.31
PCYT1A-202ENST00000411591 CNIH4Q9P003 139 aa13.13□□□□□ -0.31
PCYT1A-202ENST00000411591 CNOT11Q9UKZ1 510 aaKnown RBP13.13□□□□□ -0.31
PCYT1A-202ENST00000411591 IKBKGQ9Y6K9 419 aa13.13□□□□□ -0.31
PCYT1A-202ENST00000411591 A0A088AWK7 358 aa13.12□□□□□ -0.31
PCYT1A-202ENST00000411591 TRIM3O75382 744 aaPredicted RBP13.12□□□□□ -0.31
PCYT1A-202ENST00000411591 C1QAP02745 245 aa13.12□□□□□ -0.31
PCYT1A-202ENST00000411591 TNNI3P19429 210 aa13.12□□□□□ -0.31
PCYT1A-202ENST00000411591 ZNF10P21506 573 aaPredicted RBP13.12□□□□□ -0.31
PCYT1A-202ENST00000411591 GDF1P27539 372 aa13.12□□□□□ -0.31
PCYT1A-202ENST00000411591 ANP32AP39687 249 aaKnown RBP13.12□□□□□ -0.31
PCYT1A-202ENST00000411591 CDKN2DP55273 166 aa13.12□□□□□ -0.31
PCYT1A-202ENST00000411591 SARNPP82979 210 aaKnown RBP13.12□□□□□ -0.31
PCYT1A-202ENST00000411591 STX4Q12846 297 aa13.12□□□□□ -0.31
PCYT1A-202ENST00000411591 CBLBQ13191 982 aa13.12□□□□□ -0.31
PCYT1A-202ENST00000411591 SERTAD2Q14140 314 aa13.12□□□□□ -0.31
PCYT1A-202ENST00000411591 EFTUD2Q15029 972 aaKnown RBP eCLIP13.12□□□□□ -0.313e-7■■□□□ 13
PCYT1A-202ENST00000411591 ADPRMQ3LIE5 342 aa13.12□□□□□ -0.31
PCYT1A-202ENST00000411591 NHSL2Q5HYW2 709 aa13.12□□□□□ -0.31
PCYT1A-202ENST00000411591 RBM20Q5T481 1227 aaKnown RBP13.12□□□□□ -0.31
PCYT1A-202ENST00000411591 ANKRD22Q5VYY1 191 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms