RNA–Protein interactions for RNA: ENST00000411464.3

MRPL55-220, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 767 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-220ENST00000411464 CEBPEQ15744 281 aa15.44■□□□□ 0.06
MRPL55-220ENST00000411464 MPEG1Q2M385 716 aa15.44■□□□□ 0.06
MRPL55-220ENST00000411464 SLC22A10Q63ZE4 541 aa15.44■□□□□ 0.06
MRPL55-220ENST00000411464 ZC3HC1Q86WB0 502 aaKnown RBP15.44■□□□□ 0.06
MRPL55-220ENST00000411464 LRRC8AQ8IWT6 810 aa15.44■□□□□ 0.06
MRPL55-220ENST00000411464 SRFBP1Q8NEF9 429 aaKnown RBP15.44■□□□□ 0.06
MRPL55-220ENST00000411464 C7orf57Q8NEG2 295 aa15.44■□□□□ 0.06
MRPL55-220ENST00000411464 GOT1L1Q8NHS2 421 aaPredicted RBP15.44■□□□□ 0.06
MRPL55-220ENST00000411464 ANKRD49Q8WVL7 239 aa15.44■□□□□ 0.06
MRPL55-220ENST00000411464 LRRC39Q96DD0 335 aa15.44■□□□□ 0.06
MRPL55-220ENST00000411464 PWWP2AQ96N64 755 aa15.44■□□□□ 0.06
MRPL55-220ENST00000411464 KCNC2Q96PR1 638 aa15.44■□□□□ 0.06
MRPL55-220ENST00000411464 F2RL3Q96RI0 385 aa15.44■□□□□ 0.06
MRPL55-220ENST00000411464 LIME1Q9H400 295 aa15.44■□□□□ 0.06
MRPL55-220ENST00000411464 CNOT10Q9H9A5 744 aaKnown RBP15.44■□□□□ 0.06
MRPL55-220ENST00000411464 LYRM4Q9HD34 91 aa15.44■□□□□ 0.06
MRPL55-220ENST00000411464 SEMA4BQ9NPR2 832 aaPredicted RBP15.44■□□□□ 0.06
MRPL55-220ENST00000411464 PRDM7Q9NQW5 492 aa15.44■□□□□ 0.06
MRPL55-220ENST00000411464 DNAJC11Q9NVH1 559 aa15.44■□□□□ 0.06
MRPL55-220ENST00000411464 B4GALT7Q9UBV7 327 aa15.44■□□□□ 0.06
MRPL55-220ENST00000411464 ZNF490Q9ULM2 529 aaPredicted RBP15.44■□□□□ 0.06
MRPL55-220ENST00000411464 PSAT1Q9Y617 370 aa15.44■□□□□ 0.06
MRPL55-220ENST00000411464 SPACA6W5XKT8 324 aa15.44■□□□□ 0.06
MRPL55-220ENST00000411464 INTS1Q8N201 2190 aaKnown RBP15.43■□□□□ 0.06
MRPL55-220ENST00000411464 ZNF354AO60765 605 aaPredicted RBP15.43■□□□□ 0.06
MRPL55-220ENST00000411464 ETHE1O95571 254 aa15.43■□□□□ 0.06
MRPL55-220ENST00000411464 TBX6O95947 436 aaPredicted RBP15.43■□□□□ 0.06
MRPL55-220ENST00000411464 COX7A2P14406 83 aa15.43■□□□□ 0.06
MRPL55-220ENST00000411464 HOXB4P17483 251 aaPredicted RBP15.43■□□□□ 0.06
MRPL55-220ENST00000411464 UQCRC1P31930 480 aa15.43■□□□□ 0.06
MRPL55-220ENST00000411464 PIGAP37287 484 aa15.43■□□□□ 0.06
MRPL55-220ENST00000411464 SLC12A2P55011 1212 aa15.43■□□□□ 0.06
MRPL55-220ENST00000411464 MGAT5Q09328 741 aa15.43■□□□□ 0.06
MRPL55-220ENST00000411464 ASPHQ12797 758 aa15.43■□□□□ 0.06
MRPL55-220ENST00000411464 TGFBIQ15582 683 aa15.43■□□□□ 0.06
MRPL55-220ENST00000411464 HIST2H2ACQ16777 129 aaPredicted RBP15.43■□□□□ 0.06
MRPL55-220ENST00000411464 PIGGQ5H8A4 983 aa15.43■□□□□ 0.06
MRPL55-220ENST00000411464 RIPPLY2Q5TAB7 128 aa15.43■□□□□ 0.06
MRPL55-220ENST00000411464 STEAP4Q687X5 459 aa15.43■□□□□ 0.06
MRPL55-220ENST00000411464 HIST2H2AA3Q6FI13 130 aa15.43■□□□□ 0.06
MRPL55-220ENST00000411464 VN1R5Q7Z5H4 357 aa15.43■□□□□ 0.06
MRPL55-220ENST00000411464 TCAIMQ8N3R3 496 aa15.43■□□□□ 0.06
MRPL55-220ENST00000411464 SLCO2A1Q92959 643 aa15.43■□□□□ 0.06
MRPL55-220ENST00000411464 PTCD3Q96EY7 689 aaKnown RBP15.43■□□□□ 0.06
MRPL55-220ENST00000411464 LRRC46Q96FV0 321 aa15.43■□□□□ 0.06
MRPL55-220ENST00000411464 OSBPL9Q96SU4 736 aa15.43■□□□□ 0.06
MRPL55-220ENST00000411464 GPATCH1Q9BRR8 931 aaKnown RBP15.43■□□□□ 0.06
MRPL55-220ENST00000411464 RASSF1Q9NS23 344 aa15.43■□□□□ 0.06
MRPL55-220ENST00000411464 ZNF358Q9NW07 568 aa15.43■□□□□ 0.06
MRPL55-220ENST00000411464 WWOXQ9NZC7 414 aa15.43■□□□□ 0.06
MRPL55-220ENST00000411464 HSPB2A8KAH6 182 aa15.42■□□□□ 0.06
MRPL55-220ENST00000411464 SYT5O00445 386 aa15.42■□□□□ 0.06
MRPL55-220ENST00000411464 DYRK3O43781 588 aa15.42■□□□□ 0.06
MRPL55-220ENST00000411464 DGKQP52824 942 aa15.42■□□□□ 0.06
MRPL55-220ENST00000411464 KCNJ2P63252 427 aa15.42■□□□□ 0.06
MRPL55-220ENST00000411464 ID2Q02363 134 aa15.42■□□□□ 0.06
MRPL55-220ENST00000411464 TBL3Q12788 808 aaKnown RBP15.42■□□□□ 0.06
MRPL55-220ENST00000411464 DOC2AQ14183 400 aa15.42■□□□□ 0.06
MRPL55-220ENST00000411464 FRG1Q14331 258 aaKnown RBP15.42■□□□□ 0.06
MRPL55-220ENST00000411464 MORF4L2Q15014 288 aa15.42■□□□□ 0.06
MRPL55-220ENST00000411464 HSPB2Q16082 182 aa15.42■□□□□ 0.06
MRPL55-220ENST00000411464 ZNF791Q3KP31 576 aaPredicted RBP15.42■□□□□ 0.06
MRPL55-220ENST00000411464 PAGE2BQ5JRK9 111 aa15.42■□□□□ 0.06
MRPL55-220ENST00000411464 ADNP2Q6IQ32 1131 aa15.42■□□□□ 0.06
MRPL55-220ENST00000411464 SNX31Q8N9S9 440 aa15.42■□□□□ 0.06
MRPL55-220ENST00000411464 SLC22A8Q8TCC7 542 aa15.42■□□□□ 0.06
MRPL55-220ENST00000411464 ZNF721Q8TF20 911 aa15.42■□□□□ 0.06
MRPL55-220ENST00000411464 SENP5Q96HI0 755 aaPredicted RBP15.42■□□□□ 0.06
MRPL55-220ENST00000411464 MAPKAP1Q9BPZ7 522 aa15.42■□□□□ 0.06
MRPL55-220ENST00000411464 TBCDQ9BTW9 1192 aa15.42■□□□□ 0.06
MRPL55-220ENST00000411464 EFCAB11Q9BUY7 163 aa15.42■□□□□ 0.06
MRPL55-220ENST00000411464 DDX47Q9H0S4 455 aaKnown RBP15.42■□□□□ 0.06
MRPL55-220ENST00000411464 ZFP64Q9NPA5 681 aa15.42■□□□□ 0.06
MRPL55-220ENST00000411464 CRIM1Q9NZV1 1036 aa15.42■□□□□ 0.06
MRPL55-220ENST00000411464 BOKQ9UMX3 212 aaPredicted RBP15.42■□□□□ 0.06
MRPL55-220ENST00000411464 PCDHGB3Q9Y5G1 929 aa15.42■□□□□ 0.06
MRPL55-220ENST00000411464 TEX264Q9Y6I9 313 aa15.42■□□□□ 0.06
MRPL55-220ENST00000411464 DVL2O14641 736 aa15.41■□□□□ 0.06
MRPL55-220ENST00000411464 PROM1O43490 865 aa15.41■□□□□ 0.06
MRPL55-220ENST00000411464 STK16O75716 305 aa15.41■□□□□ 0.06
MRPL55-220ENST00000411464 FAM155BO75949 473 aa15.41■□□□□ 0.06
MRPL55-220ENST00000411464 ATP5A1P25705 553 aaKnown RBP15.41■□□□□ 0.06
MRPL55-220ENST00000411464 GGT5P36269 586 aa15.41■□□□□ 0.06
MRPL55-220ENST00000411464 ARL4CP56559 192 aa15.41■□□□□ 0.06
MRPL55-220ENST00000411464 LAPTM5Q13571 262 aa15.41■□□□□ 0.06
MRPL55-220ENST00000411464 PDK4Q16654 411 aa15.41■□□□□ 0.06
MRPL55-220ENST00000411464 AP5B1Q2VPB7 878 aa15.41■□□□□ 0.06
MRPL55-220ENST00000411464 GPSM1Q86YR5 675 aa15.41■□□□□ 0.06
MRPL55-220ENST00000411464 FBXW8Q8N3Y1 598 aa15.41■□□□□ 0.06
MRPL55-220ENST00000411464 LIX1Q8N485 282 aa15.41■□□□□ 0.06
MRPL55-220ENST00000411464 SLC15A4Q8N697 577 aa15.41■□□□□ 0.06
MRPL55-220ENST00000411464 ACOT4Q8N9L9 421 aa15.41■□□□□ 0.06
MRPL55-220ENST00000411464 NUBPLQ8TB37 319 aa15.41■□□□□ 0.06
MRPL55-220ENST00000411464 ANKRD9Q96BM1 317 aaPredicted RBP15.41■□□□□ 0.06
MRPL55-220ENST00000411464 RBM18Q96H35 190 aaKnown RBP15.41■□□□□ 0.06
MRPL55-220ENST00000411464 CAPZA3Q96KX2 299 aa15.41■□□□□ 0.06
MRPL55-220ENST00000411464 DGAT2Q96PD7 388 aa15.41■□□□□ 0.06
MRPL55-220ENST00000411464 KRT12Q99456 494 aa15.41■□□□□ 0.06
MRPL55-220ENST00000411464 DERL2Q9GZP9 239 aa15.41■□□□□ 0.06
MRPL55-220ENST00000411464 POPDC3Q9HBV1 291 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms