RNA–Protein interactions for RNA: ENST00000409987.5

LSM5-206, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, human

TSL 5 BASIC

Gene LSM5, Length 504 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LSM5-206	ENST00000409987	GRAMD2A	Q8IUY3	354 aa		4.59	□□□□□ -1.67
LSM5-206	ENST00000409987	BBS5	Q8N3I7	341 aa		4.59	□□□□□ -1.67
LSM5-206	ENST00000409987	KLHDC1	Q8N7A1	406 aa		4.59	□□□□□ -1.67
LSM5-206	ENST00000409987	STPG4	Q8N801	248 aa		4.59	□□□□□ -1.67
LSM5-206	ENST00000409987	CCDC63	Q8NA47	563 aa		4.59	□□□□□ -1.67
LSM5-206	ENST00000409987	NOA1	Q8NC60	698 aa	Known RBP	4.59	□□□□□ -1.67
LSM5-206	ENST00000409987	ZNF671	Q8TAW3	534 aa		4.59	□□□□□ -1.67
LSM5-206	ENST00000409987	AGR3	Q8TD06	166 aa		4.59	□□□□□ -1.67
LSM5-206	ENST00000409987	SAP25	Q8TEE9	199 aa		4.59	□□□□□ -1.67
LSM5-206	ENST00000409987	RLN3	Q8WXF3	142 aa		4.59	□□□□□ -1.67
LSM5-206	ENST00000409987	FBXO32	Q969P5	355 aa		4.59	□□□□□ -1.67
LSM5-206	ENST00000409987	TMEM143	Q96AN5	459 aa		4.59	□□□□□ -1.67
LSM5-206	ENST00000409987	PIWIL1	Q96J94	861 aa	Known RBP	4.59	□□□□□ -1.67
LSM5-206	ENST00000409987	GUCD1	Q96NT3	240 aa		4.59	□□□□□ -1.67
LSM5-206	ENST00000409987	PRMT1	Q99873	361 aa	Known RBP	4.59	□□□□□ -1.67
LSM5-206	ENST00000409987	NTMT1	Q9BV86	223 aa		4.59	□□□□□ -1.67
LSM5-206	ENST00000409987	PANK2	Q9BZ23	570 aa		4.59	□□□□□ -1.67
LSM5-206	ENST00000409987	DPEP3	Q9H4B8	488 aa		4.59	□□□□□ -1.67
LSM5-206	ENST00000409987	ACTL8	Q9H568	366 aa		4.59	□□□□□ -1.67
LSM5-206	ENST00000409987	WDR76	Q9H967	626 aa		4.59	□□□□□ -1.67
LSM5-206	ENST00000409987	COG4	Q9H9E3	785 aa		4.59	□□□□□ -1.67
LSM5-206	ENST00000409987	ACOXL	Q9NUZ1	547 aa		4.59	□□□□□ -1.67
LSM5-206	ENST00000409987	HOXC10	Q9NYD6	342 aa		4.59	□□□□□ -1.67
LSM5-206	ENST00000409987	C6orf203	Q9P0P8	240 aa	Predicted RBP	4.59	□□□□□ -1.67
LSM5-206	ENST00000409987	VPS54	Q9P1Q0	977 aa		4.59	□□□□□ -1.67
LSM5-206	ENST00000409987	CHRNA9	Q9UGM1	479 aa		4.59	□□□□□ -1.67
LSM5-206	ENST00000409987	NARF	Q9UHQ1	456 aa		4.59	□□□□□ -1.67
LSM5-206	ENST00000409987	BAIAP2L1	Q9UHR4	511 aa		4.59	□□□□□ -1.67
LSM5-206	ENST00000409987	KIAA1210	Q9ULL0	1709 aa		4.58	□□□□□ -1.68
LSM5-206	ENST00000409987	IGHV4-61	A0A0C4DH41	118 aa		4.58	□□□□□ -1.68
LSM5-206	ENST00000409987	FAM172BP	A6NC97	362 aa		4.58	□□□□□ -1.68
LSM5-206	ENST00000409987	ANKRD30BL	A7E2S9	258 aa		4.58	□□□□□ -1.68
LSM5-206	ENST00000409987		H0YIV9	168 aa		4.58	□□□□□ -1.68
LSM5-206	ENST00000409987		L7N2F9	121 aa		4.58	□□□□□ -1.68
LSM5-206	ENST00000409987	ZNF197	O14709	1029 aa		4.58	□□□□□ -1.68
LSM5-206	ENST00000409987	ADAM12	O43184	909 aa		4.58	□□□□□ -1.68
LSM5-206	ENST00000409987	ACSL4	O60488	711 aa		4.58	□□□□□ -1.68
LSM5-206	ENST00000409987	LMX1B	O60663	402 aa		4.58	□□□□□ -1.68
LSM5-206	ENST00000409987	KIAA0754	O94854	1291 aa		4.58	□□□□□ -1.68
LSM5-206	ENST00000409987	NGF	P01138	241 aa		4.58	□□□□□ -1.68
LSM5-206	ENST00000409987	IGHV4-59	P01825	116 aa		4.58	□□□□□ -1.68
LSM5-206	ENST00000409987	APOH	P02749	345 aa	Predicted RBP	4.58	□□□□□ -1.68
LSM5-206	ENST00000409987	UGT2B4	P06133	528 aa		4.58	□□□□□ -1.68
LSM5-206	ENST00000409987	PROS1	P07225	676 aa		4.58	□□□□□ -1.68
LSM5-206	ENST00000409987	GP1BB	P13224	206 aa		4.58	□□□□□ -1.68
LSM5-206	ENST00000409987	DARS	P14868	501 aa	Known RBP	4.58	□□□□□ -1.68
LSM5-206	ENST00000409987	PAICS	P22234	425 aa	Known RBP	4.58	□□□□□ -1.68
LSM5-206	ENST00000409987	GAL	P22466	123 aa		4.58	□□□□□ -1.68
LSM5-206	ENST00000409987	HTR2A	P28223	471 aa		4.58	□□□□□ -1.68
LSM5-206	ENST00000409987	FCGR2B	P31994	310 aa	Predicted RBP	4.58	□□□□□ -1.68
LSM5-206	ENST00000409987	CEACAM8	P31997	349 aa	Predicted RBP	4.58	□□□□□ -1.68
LSM5-206	ENST00000409987	SLC1A3	P43003	542 aa		4.58	□□□□□ -1.68
LSM5-206	ENST00000409987	MAGEA11	P43364	429 aa		4.58	□□□□□ -1.68
LSM5-206	ENST00000409987	TNFRSF4	P43489	277 aa		4.58	□□□□□ -1.68
LSM5-206	ENST00000409987	CCL11	P51671	97 aa		4.58	□□□□□ -1.68
LSM5-206	ENST00000409987	NR0B1	P51843	470 aa	Known RBP	4.58	□□□□□ -1.68
LSM5-206	ENST00000409987	LINC01547	P58512	204 aa	Predicted RBP	4.58	□□□□□ -1.68
LSM5-206	ENST00000409987	ACTR3	P61158	418 aa		4.58	□□□□□ -1.68
LSM5-206	ENST00000409987	MYBPC1	Q00872	1141 aa		4.58	□□□□□ -1.68
LSM5-206	ENST00000409987	STX1A	Q16623	288 aa		4.58	□□□□□ -1.68
LSM5-206	ENST00000409987	ANKRD55	Q3KP44	614 aa		4.58	□□□□□ -1.68
LSM5-206	ENST00000409987	ADPRM	Q3LIE5	342 aa		4.58	□□□□□ -1.68
LSM5-206	ENST00000409987	NKAIN2	Q5VXU1	208 aa		4.58	□□□□□ -1.68
LSM5-206	ENST00000409987	UGT3A1	Q6NUS8	523 aa		4.58	□□□□□ -1.68
LSM5-206	ENST00000409987	FUT10	Q6P4F1	479 aa		4.58	□□□□□ -1.68
LSM5-206	ENST00000409987	METAP1D	Q6UB28	335 aa	Predicted RBP	4.58	□□□□□ -1.68
LSM5-206	ENST00000409987	SLC26A9	Q7LBE3	791 aa		4.58	□□□□□ -1.68
LSM5-206	ENST00000409987	LUZP1	Q86V48	1076 aa		4.58	□□□□□ -1.68
LSM5-206	ENST00000409987	PIGZ	Q86VD9	579 aa		4.58	□□□□□ -1.68
LSM5-206	ENST00000409987	SLC22A9	Q8IVM8	553 aa		4.58	□□□□□ -1.68
LSM5-206	ENST00000409987	LRRC17	Q8N6Y2	441 aa		4.58	□□□□□ -1.68
LSM5-206	ENST00000409987	GBP7	Q8N8V2	638 aa	Predicted RBP	4.58	□□□□□ -1.68
LSM5-206	ENST00000409987	AZIN2	Q96A70	460 aa		4.58	□□□□□ -1.68
LSM5-206	ENST00000409987	LMLN	Q96KR4	655 aa		4.58	□□□□□ -1.68
LSM5-206	ENST00000409987	NDN	Q99608	321 aa		4.58	□□□□□ -1.68
LSM5-206	ENST00000409987	TBC1D10A	Q9BXI6	508 aa		4.58	□□□□□ -1.68
LSM5-206	ENST00000409987	MRPL13	Q9BYD1	178 aa	Known RBP	4.58	□□□□□ -1.68
LSM5-206	ENST00000409987	CPVL	Q9H3G5	476 aa		4.58	□□□□□ -1.68
LSM5-206	ENST00000409987	YY1AP1	Q9H869	796 aa		4.58	□□□□□ -1.68
LSM5-206	ENST00000409987	ZNF334	Q9HCZ1	680 aa	Predicted RBP	4.58	□□□□□ -1.68
LSM5-206	ENST00000409987	SIX2	Q9NPC8	291 aa		4.58	□□□□□ -1.68
LSM5-206	ENST00000409987	KLHL8	Q9P2G9	620 aa	Predicted RBP	4.58	□□□□□ -1.68
LSM5-206	ENST00000409987	TNN	Q9UQP3	1299 aa		4.58	□□□□□ -1.68
LSM5-206	ENST00000409987	MRPS2	Q9Y399	296 aa	Known RBP	4.58	□□□□□ -1.68
LSM5-206	ENST00000409987	DYNC1LI1	Q9Y6G9	523 aa	Known RBP	4.58	□□□□□ -1.68
LSM5-206	ENST00000409987	GREB1L	Q9C091	1923 aa	Predicted RBP	4.58	□□□□□ -1.68
LSM5-206	ENST00000409987	MAPKBP1	O60336	1514 aa		4.57	□□□□□ -1.68
LSM5-206	ENST00000409987	PTCH1	Q13635	1447 aa		4.57	□□□□□ -1.68
LSM5-206	ENST00000409987	SF3B1	O75533	1304 aa	Known RBP eCLIP	4.57	□□□□□ -1.68	3e-7	■■■■■ 27.3
LSM5-206	ENST00000409987	WDR19	Q8NEZ3	1342 aa		4.57	□□□□□ -1.68
LSM5-206	ENST00000409987	TRAV18	A0A075B6X5	111 aa		4.57	□□□□□ -1.68
LSM5-206	ENST00000409987	ARPC4-TTLL3	A0A0A6YYG9	625 aa		4.57	□□□□□ -1.68
LSM5-206	ENST00000409987	C17orf105	B2RV13	164 aa		4.57	□□□□□ -1.68
LSM5-206	ENST00000409987		M0R296	226 aa		4.57	□□□□□ -1.68
LSM5-206	ENST00000409987	EEF2K	O00418	725 aa	Known RBP	4.57	□□□□□ -1.68
LSM5-206	ENST00000409987	PRRG1	O14668	218 aa		4.57	□□□□□ -1.68
LSM5-206	ENST00000409987	CIB2	O75838	187 aa		4.57	□□□□□ -1.68
LSM5-206	ENST00000409987	SERPINF2	P08697	491 aa		4.57	□□□□□ -1.68
LSM5-206	ENST00000409987	ZCCHC18	P0CG32	403 aa		4.57	□□□□□ -1.68
LSM5-206	ENST00000409987	KRT3	P12035	628 aa		4.57	□□□□□ -1.68

Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms