RNA–Protein interactions for RNA: ENST00000409817.1

CXCR4-202, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS P3 BASIC

Gene CXCR4, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-202ENST00000409817 C2orf73Q8N5S3 287 aaPredicted RBP7.13□□□□□ -1.27
CXCR4-202ENST00000409817 LMNTD1Q8N9Z9 388 aa7.13□□□□□ -1.27
CXCR4-202ENST00000409817 GALNT11Q8NCW6 608 aa7.13□□□□□ -1.27
CXCR4-202ENST00000409817 ZNF555Q8NEP9 628 aa7.13□□□□□ -1.27
CXCR4-202ENST00000409817 CREB3L4Q8TEY5 395 aa7.13□□□□□ -1.27
CXCR4-202ENST00000409817 LZICQ8WZA0 190 aa7.13□□□□□ -1.27
CXCR4-202ENST00000409817 TM4SF18Q96CE8 201 aa7.13□□□□□ -1.27
CXCR4-202ENST00000409817 ZBED6CLQ96FA7 236 aaPredicted RBP7.13□□□□□ -1.27
CXCR4-202ENST00000409817 KLHDC7BQ96G42 594 aa7.13□□□□□ -1.27
CXCR4-202ENST00000409817 TSC22D3Q99576 134 aa7.13□□□□□ -1.27
CXCR4-202ENST00000409817 FAIM2Q9BWQ8 316 aa7.13□□□□□ -1.27
CXCR4-202ENST00000409817 CAAP1Q9H8G2 361 aa7.13□□□□□ -1.27
CXCR4-202ENST00000409817 KCNK12Q9HB15 430 aa7.13□□□□□ -1.27
CXCR4-202ENST00000409817 DDX18Q9NVP1 670 aaKnown RBP7.13□□□□□ -1.27
CXCR4-202ENST00000409817 PADI2Q9Y2J8 665 aa7.13□□□□□ -1.27
CXCR4-202ENST00000409817 MSRB2Q9Y3D2 182 aa7.13□□□□□ -1.27
CXCR4-202ENST00000409817 TRANK1O15050 2925 aa7.12□□□□□ -1.27
CXCR4-202ENST00000409817 CEP290O15078 2479 aa7.12□□□□□ -1.27
CXCR4-202ENST00000409817 NUP214P35658 2090 aaPredicted RBP7.12□□□□□ -1.27
CXCR4-202ENST00000409817 DOCK9Q9BZ29 2069 aa7.12□□□□□ -1.27
CXCR4-202ENST00000409817 LRIT2A6NDA9 550 aa7.12□□□□□ -1.27
CXCR4-202ENST00000409817 POM121BA6NF01 834 aa7.12□□□□□ -1.27
CXCR4-202ENST00000409817 C10orf142B7Z368 130 aa7.12□□□□□ -1.27
CXCR4-202ENST00000409817 SHISA8B8ZZ34 492 aa7.12□□□□□ -1.27
CXCR4-202ENST00000409817 PDPK1O15530 556 aa7.12□□□□□ -1.27
CXCR4-202ENST00000409817 PGM3O95394 542 aa7.12□□□□□ -1.27
CXCR4-202ENST00000409817 SNAP29O95721 258 aa7.12□□□□□ -1.27
CXCR4-202ENST00000409817 GBAP04062 536 aa7.12□□□□□ -1.27
CXCR4-202ENST00000409817 ITGA2P17301 1181 aa7.12□□□□□ -1.27
CXCR4-202ENST00000409817 FPR1P21462 350 aa7.12□□□□□ -1.27
CXCR4-202ENST00000409817 PSMB5P28074 263 aa7.12□□□□□ -1.27
CXCR4-202ENST00000409817 TTKP33981 857 aa7.12□□□□□ -1.27
CXCR4-202ENST00000409817 CHI3L1P36222 383 aaPredicted RBP7.12□□□□□ -1.27
CXCR4-202ENST00000409817 CRATP43155 626 aa7.12□□□□□ -1.27
CXCR4-202ENST00000409817 RABIFP47224 123 aa7.12□□□□□ -1.27
CXCR4-202ENST00000409817 PRIM2P49643 509 aa7.12□□□□□ -1.27
CXCR4-202ENST00000409817 TPMTP51580 245 aa7.12□□□□□ -1.27
CXCR4-202ENST00000409817 CCR5P51681 352 aa7.12□□□□□ -1.27
CXCR4-202ENST00000409817 ITGA1P56199 1179 aa7.12□□□□□ -1.27
CXCR4-202ENST00000409817 SELENOWP63302 87 aa7.12□□□□□ -1.27
CXCR4-202ENST00000409817 MC1RQ01726 317 aa7.12□□□□□ -1.27
CXCR4-202ENST00000409817 MPEG1Q2M385 716 aa7.12□□□□□ -1.27
CXCR4-202ENST00000409817 CRB2Q5IJ48 1285 aa7.12□□□□□ -1.27
CXCR4-202ENST00000409817 DDX59Q5T1V6 619 aaKnown RBP eCLIP7.12□□□□□ -1.27
CXCR4-202ENST00000409817 LCE2CQ5TA81 110 aa7.12□□□□□ -1.27
CXCR4-202ENST00000409817 FOXB2Q5VYV0 432 aa7.12□□□□□ -1.27
CXCR4-202ENST00000409817 OR4C11Q6IEV9 310 aa7.12□□□□□ -1.27
CXCR4-202ENST00000409817 TBPL2Q6SJ96 375 aa7.12□□□□□ -1.27
CXCR4-202ENST00000409817 SPESP1Q6UW49 350 aa7.12□□□□□ -1.27
CXCR4-202ENST00000409817 ENPP7Q6UWV6 458 aa7.12□□□□□ -1.27
CXCR4-202ENST00000409817 TMEM26Q6ZUK4 368 aa7.12□□□□□ -1.27
CXCR4-202ENST00000409817 ADCK2Q7Z695 626 aa7.12□□□□□ -1.27
CXCR4-202ENST00000409817 AMIGO1Q86WK6 493 aa7.12□□□□□ -1.27
CXCR4-202ENST00000409817 NAGSQ8N159 534 aa7.12□□□□□ -1.27
CXCR4-202ENST00000409817 METTL25Q8N6Q8 603 aa7.12□□□□□ -1.27
CXCR4-202ENST00000409817 ARL10Q8N8L6 244 aa7.12□□□□□ -1.27
CXCR4-202ENST00000409817 OR2L3Q8NG85 312 aa7.12□□□□□ -1.27
CXCR4-202ENST00000409817 RPLP0P6Q8NHW5 317 aa7.12□□□□□ -1.27
CXCR4-202ENST00000409817 PSMA8Q8TAA3 256 aa7.12□□□□□ -1.27
CXCR4-202ENST00000409817 KCNC2Q96PR1 638 aa7.12□□□□□ -1.27
CXCR4-202ENST00000409817 F2RL3Q96RI0 385 aa7.12□□□□□ -1.27
CXCR4-202ENST00000409817 ZNF347Q96SE7 839 aa7.12□□□□□ -1.27
CXCR4-202ENST00000409817 DOHHQ9BU89 302 aa7.12□□□□□ -1.27
CXCR4-202ENST00000409817 TWSG1Q9GZX9 223 aa7.12□□□□□ -1.27
CXCR4-202ENST00000409817 SLC6A17Q9H1V8 727 aa7.12□□□□□ -1.27
CXCR4-202ENST00000409817 FZD3Q9NPG1 666 aa7.12□□□□□ -1.27
CXCR4-202ENST00000409817 PRDM8Q9NQV8 689 aa7.12□□□□□ -1.27
CXCR4-202ENST00000409817 C1GALT1Q9NS00 363 aa7.12□□□□□ -1.27
CXCR4-202ENST00000409817 TAAR2Q9P1P5 351 aa7.12□□□□□ -1.27
CXCR4-202ENST00000409817 USP36Q9P275 1121 aaKnown RBP7.12□□□□□ -1.27
CXCR4-202ENST00000409817 ANKMY1Q9P2S6 941 aa7.12□□□□□ -1.27
CXCR4-202ENST00000409817 DMTF1Q9Y222 760 aa7.12□□□□□ -1.27
CXCR4-202ENST00000409817 ANGPT4Q9Y264 503 aa7.12□□□□□ -1.27
CXCR4-202ENST00000409817 PCDHGB5Q9Y5G0 923 aa7.12□□□□□ -1.27
CXCR4-202ENST00000409817 DGKBQ9Y6T7 804 aa7.12□□□□□ -1.27
CXCR4-202ENST00000409817 COMMD3-BMI1R4GMX3 469 aa7.12□□□□□ -1.27
CXCR4-202ENST00000409817 HEATR5BQ9P2D3 2071 aa7.12□□□□□ -1.27
CXCR4-202ENST00000409817 A0A0A6YYD5 115 aa7.11□□□□□ -1.27
CXCR4-202ENST00000409817 IGKV1-8A0A0C4DH67 115 aa7.11□□□□□ -1.27
CXCR4-202ENST00000409817 TCRBV21S2A2A0A5A6 115 aa7.11□□□□□ -1.27
CXCR4-202ENST00000409817 FEZF1A0PJY2 475 aa7.11□□□□□ -1.27
CXCR4-202ENST00000409817 OR52A4PA6NMU1 304 aa7.11□□□□□ -1.27
CXCR4-202ENST00000409817 C2CD4DB7Z1M9 353 aa7.11□□□□□ -1.27
CXCR4-202ENST00000409817 PLOD2O00469 737 aa7.11□□□□□ -1.27
CXCR4-202ENST00000409817 MAN2B1O00754 1011 aa7.11□□□□□ -1.27
CXCR4-202ENST00000409817 TERTO14746 1132 aaKnown RBP7.11□□□□□ -1.27
CXCR4-202ENST00000409817 ADAMDEC1O15204 470 aa7.11□□□□□ -1.27
CXCR4-202ENST00000409817 SLC16A6O15403 523 aa7.11□□□□□ -1.27
CXCR4-202ENST00000409817 ADAM11O75078 769 aa7.11□□□□□ -1.27
CXCR4-202ENST00000409817 SEMA4FO95754 770 aa7.11□□□□□ -1.27
CXCR4-202ENST00000409817 DLGAP3O95886 979 aa7.11□□□□□ -1.27
CXCR4-202ENST00000409817 NTRK1P04629 796 aa7.11□□□□□ -1.27
CXCR4-202ENST00000409817 GNAO1P09471 354 aa7.11□□□□□ -1.27
CXCR4-202ENST00000409817 ITGAMP11215 1152 aa7.11□□□□□ -1.27
CXCR4-202ENST00000409817 ATP6V1B1P15313 513 aa7.11□□□□□ -1.27
CXCR4-202ENST00000409817 GABRG2P18507 467 aa7.11□□□□□ -1.27
CXCR4-202ENST00000409817 SSR2P43308 183 aa7.11□□□□□ -1.27
CXCR4-202ENST00000409817 ALDH3B2P48448 385 aa7.11□□□□□ -1.27
CXCR4-202ENST00000409817 DGKEP52429 567 aa7.11□□□□□ -1.27
CXCR4-202ENST00000409817 MANFP55145 182 aaKnown RBP7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms