RNA–Protein interactions for RNA: ENST00000409593.5

PMS1-203, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 1,668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-203ENST00000409593 ALDH3B1P43353 468 aa3.08□□□□□ -1.92
PMS1-203ENST00000409593 IST1P53990 364 aa3.08□□□□□ -1.92
PMS1-203ENST00000409593 PCK2Q16822 640 aa3.08□□□□□ -1.92
PMS1-203ENST00000409593 RFWD3Q6PCD5 774 aa3.08□□□□□ -1.92
PMS1-203ENST00000409593 SAMD12Q8N8I0 201 aa3.08□□□□□ -1.92
PMS1-203ENST00000409593 MRAPQ8TCY5 172 aa3.08□□□□□ -1.92
PMS1-203ENST00000409593 SPATA17Q96L03 361 aa3.08□□□□□ -1.92
PMS1-203ENST00000409593 ZMAT2Q96NC0 199 aaKnown RBP3.08□□□□□ -1.92
PMS1-203ENST00000409593 ZNF559Q9BR84 538 aa3.08□□□□□ -1.92
PMS1-203ENST00000409593 LRRC2Q9BYS8 371 aa3.08□□□□□ -1.92
PMS1-203ENST00000409593 SLITRK2Q9H156 845 aa3.08□□□□□ -1.92
PMS1-203ENST00000409593 SRD5A3Q9H8P0 318 aa3.08□□□□□ -1.92
PMS1-203ENST00000409593 GTF3C4Q9UKN8 822 aa3.08□□□□□ -1.92
PMS1-203ENST00000409593 CELA1Q9UNI1 258 aa3.08□□□□□ -1.92
PMS1-203ENST00000409593 DUSP11O75319 330 aaKnown RBP3.07□□□□□ -1.92
PMS1-203ENST00000409593 CSO75390 466 aaKnown RBP3.07□□□□□ -1.92
PMS1-203ENST00000409593 FHP07954 510 aa3.07□□□□□ -1.92
PMS1-203ENST00000409593 SUPT20HL2P0C7V6 817 aa3.07□□□□□ -1.92
PMS1-203ENST00000409593 ODC1P11926 461 aa3.07□□□□□ -1.92
PMS1-203ENST00000409593 GSTO1P78417 241 aa3.07□□□□□ -1.92
PMS1-203ENST00000409593 RBP5P82980 135 aa3.07□□□□□ -1.92
PMS1-203ENST00000409593 TIMM50Q3ZCQ8 353 aa3.07□□□□□ -1.92
PMS1-203ENST00000409593 MARC1Q5VT66 337 aa3.07□□□□□ -1.92
PMS1-203ENST00000409593 LIPJQ5W064 366 aa3.07□□□□□ -1.92
PMS1-203ENST00000409593 MSANTD1Q6ZTZ1 278 aa3.07□□□□□ -1.92
PMS1-203ENST00000409593 CCDC71Q8IV32 467 aaPredicted RBP3.07□□□□□ -1.92
PMS1-203ENST00000409593 NT5DC2Q9H857 520 aa3.07□□□□□ -1.92
PMS1-203ENST00000409593 TUFT1Q9NNX1 390 aa3.07□□□□□ -1.92
PMS1-203ENST00000409593 FAM212BQ9NTI7 297 aaPredicted RBP3.07□□□□□ -1.92
PMS1-203ENST00000409593 TMEM161AQ9NX61 479 aa3.07□□□□□ -1.92
PMS1-203ENST00000409593 PLEK2Q9NYT0 353 aa3.07□□□□□ -1.92
PMS1-203ENST00000409593 VPS18Q9P253 973 aa3.07□□□□□ -1.92
PMS1-203ENST00000409593 RSPH14Q9UHP6 348 aa3.07□□□□□ -1.92
PMS1-203ENST00000409593 MAGEB16A2A368 324 aa3.06□□□□□ -1.92
PMS1-203ENST00000409593 ZNF487B1APH4 448 aa3.06□□□□□ -1.92
PMS1-203ENST00000409593 HAT1O14929 419 aa3.06□□□□□ -1.92
PMS1-203ENST00000409593 PIGRP01833 764 aa3.06□□□□□ -1.92
PMS1-203ENST00000409593 UMPSP11172 480 aa3.06□□□□□ -1.92
PMS1-203ENST00000409593 BRCC3P46736 316 aa3.06□□□□□ -1.92
PMS1-203ENST00000409593 PPIAP62937 165 aaKnown RBP3.06□□□□□ -1.92
PMS1-203ENST00000409593 ABRAXAS2Q15018 415 aa3.06□□□□□ -1.92
PMS1-203ENST00000409593 LINC00242Q5T6M2 205 aa3.06□□□□□ -1.92
PMS1-203ENST00000409593 GLRX5Q86SX6 157 aa3.06□□□□□ -1.92
PMS1-203ENST00000409593 ATAD1Q8NBU5 361 aa3.06□□□□□ -1.92
PMS1-203ENST00000409593 SPATA18Q8TC71 538 aa3.06□□□□□ -1.92
PMS1-203ENST00000409593 GANCQ8TET4 914 aa3.06□□□□□ -1.92
PMS1-203ENST00000409593 ESAMQ96AP7 390 aa3.06□□□□□ -1.92
PMS1-203ENST00000409593 RBM18Q96H35 190 aaKnown RBP3.06□□□□□ -1.92
PMS1-203ENST00000409593 ZNF414Q96IQ9 312 aa3.06□□□□□ -1.92
PMS1-203ENST00000409593 CDHR1Q96JP9 859 aa3.06□□□□□ -1.92
PMS1-203ENST00000409593 MCCC1Q96RQ3 725 aaPredicted RBP3.06□□□□□ -1.92
PMS1-203ENST00000409593 ABCB10Q9NRK6 738 aa3.06□□□□□ -1.92
PMS1-203ENST00000409593 SEPT10Q9P0V9 454 aa3.06□□□□□ -1.92
PMS1-203ENST00000409593 EXOC6BQ9Y2D4 811 aa3.06□□□□□ -1.92
PMS1-203ENST00000409593 SLC6A5Q9Y345 797 aa3.06□□□□□ -1.92
PMS1-203ENST00000409593 OOEPA6NGQ2 149 aa3.05□□□□□ -1.92
PMS1-203ENST00000409593 CHUKO15111 745 aa3.05□□□□□ -1.92
PMS1-203ENST00000409593 SYT7O43581 403 aa3.05□□□□□ -1.92
PMS1-203ENST00000409593 ATP9AO75110 1047 aa3.05□□□□□ -1.92
PMS1-203ENST00000409593 OR6A2O95222 327 aa3.05□□□□□ -1.92
PMS1-203ENST00000409593 MAGEB1P43366 347 aa3.05□□□□□ -1.92
PMS1-203ENST00000409593 TRA2BP62995 288 aaKnown RBP3.05□□□□□ -1.92
PMS1-203ENST00000409593 NAAAQ02083 359 aa3.05□□□□□ -1.92
PMS1-203ENST00000409593 SLC17A1Q14916 467 aa3.05□□□□□ -1.92
PMS1-203ENST00000409593 NHSL2Q5HYW2 709 aa3.05□□□□□ -1.92
PMS1-203ENST00000409593 LRRC38Q5VT99 294 aa3.05□□□□□ -1.92
PMS1-203ENST00000409593 AGAP6Q5VW22 663 aa3.05□□□□□ -1.92
PMS1-203ENST00000409593 SNRNP48Q6IEG0 339 aaKnown RBP3.05□□□□□ -1.92
PMS1-203ENST00000409593 HOOK3Q86VS8 718 aa3.05□□□□□ -1.92
PMS1-203ENST00000409593 NAXDQ8IW45 347 aa3.05□□□□□ -1.92
PMS1-203ENST00000409593 ICA1LQ8NDH6 482 aa3.05□□□□□ -1.92
PMS1-203ENST00000409593 BEST4Q8NFU0 473 aa3.05□□□□□ -1.92
PMS1-203ENST00000409593 TCP11Q8WWU5 503 aa3.05□□□□□ -1.92
PMS1-203ENST00000409593 MRPL24Q96A35 216 aaKnown RBP3.05□□□□□ -1.92
PMS1-203ENST00000409593 PCED1BQ96HM7 432 aa3.05□□□□□ -1.92
PMS1-203ENST00000409593 NRBP1Q9UHY1 535 aa3.05□□□□□ -1.92
PMS1-203ENST00000409593 OR1A2Q9Y585 309 aa3.05□□□□□ -1.92
PMS1-203ENST00000409593 POGZQ7Z3K3 1410 aa3.05□□□□□ -1.92
PMS1-203ENST00000409593 UMODL1Q5DID0 1318 aa3.05□□□□□ -1.92
PMS1-203ENST00000409593 A0A087X0K7 114 aa3.04□□□□□ -1.92
PMS1-203ENST00000409593 A0A1W2PNU3 283 aaPredicted RBP3.04□□□□□ -1.92
PMS1-203ENST00000409593 GTPBP10A4D1E9 387 aaKnown RBP3.04□□□□□ -1.92
PMS1-203ENST00000409593 H0YIG0 161 aa3.04□□□□□ -1.92
PMS1-203ENST00000409593 CCSO14618 274 aa3.04□□□□□ -1.92
PMS1-203ENST00000409593 MCF2LO15068 1137 aa3.04□□□□□ -1.92
PMS1-203ENST00000409593 KIAA0513O60268 411 aa3.04□□□□□ -1.92
PMS1-203ENST00000409593 SRPX2O60687 465 aaPredicted RBP3.04□□□□□ -1.92
PMS1-203ENST00000409593 RHBDL1O75783 438 aa3.04□□□□□ -1.92
PMS1-203ENST00000409593 ANXA9O76027 345 aa3.04□□□□□ -1.92
PMS1-203ENST00000409593 GH1P01241 217 aa3.04□□□□□ -1.92
PMS1-203ENST00000409593 GSTA2P09210 222 aa3.04□□□□□ -1.92
PMS1-203ENST00000409593 C8orf89P0DMQ9 161 aa3.04□□□□□ -1.92
PMS1-203ENST00000409593 HMGCS2P54868 508 aa3.04□□□□□ -1.92
PMS1-203ENST00000409593 RPL27P61353 136 aaKnown RBP3.04□□□□□ -1.92
PMS1-203ENST00000409593 CNPY1Q3B7I2 92 aa3.04□□□□□ -1.92
PMS1-203ENST00000409593 CAPN13Q6MZZ7 669 aaPredicted RBP3.04□□□□□ -1.92
PMS1-203ENST00000409593 CCBE1Q6UXH8 406 aaPredicted RBP3.04□□□□□ -1.92
PMS1-203ENST00000409593 TUSC5Q8IXB3 177 aa3.04□□□□□ -1.92
PMS1-203ENST00000409593 C11orf42Q8N5U0 333 aa3.04□□□□□ -1.92
PMS1-203ENST00000409593 CDKN2AIPNLQ96HQ2 116 aa3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms