RNA–Protein interactions for RNA: ENST00000409588.1

NIF3L1-205, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,269 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-205ENST00000409588 ART3Q13508 389 aa13.54□□□□□ -0.24
NIF3L1-205ENST00000409588 RPTNQ6XPR3 784 aa13.54□□□□□ -0.24
NIF3L1-205ENST00000409588 Q6ZPB1 254 aaPredicted RBP13.54□□□□□ -0.24
NIF3L1-205ENST00000409588 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.54□□□□□ -0.24
NIF3L1-205ENST00000409588 GPR180Q86V85 440 aa13.54□□□□□ -0.24
NIF3L1-205ENST00000409588 FJX1Q86VR8 437 aa13.54□□□□□ -0.24
NIF3L1-205ENST00000409588 IFT20Q8IY31 132 aa13.54□□□□□ -0.24
NIF3L1-205ENST00000409588 FAM47BQ8NA70 645 aa13.54□□□□□ -0.24
NIF3L1-205ENST00000409588 PTPMT1Q8WUK0 201 aaPredicted RBP13.54□□□□□ -0.24
NIF3L1-205ENST00000409588 NCLNQ969V3 563 aa13.54□□□□□ -0.24
NIF3L1-205ENST00000409588 ATP6V1E2Q96A05 226 aa13.54□□□□□ -0.24
NIF3L1-205ENST00000409588 MTBPQ96DY7 904 aa13.54□□□□□ -0.24
NIF3L1-205ENST00000409588 ART5Q96L15 291 aa13.54□□□□□ -0.24
NIF3L1-205ENST00000409588 FRMD6Q96NE9 622 aa13.54□□□□□ -0.24
NIF3L1-205ENST00000409588 MAPKAP1Q9BPZ7 522 aa13.54□□□□□ -0.24
NIF3L1-205ENST00000409588 MRPL57Q9BQC6 102 aaKnown RBP13.54□□□□□ -0.24
NIF3L1-205ENST00000409588 PELOQ9BRX2 385 aaKnown RBP13.54□□□□□ -0.24
NIF3L1-205ENST00000409588 NTMT1Q9BV86 223 aa13.54□□□□□ -0.24
NIF3L1-205ENST00000409588 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.54□□□□□ -0.24
NIF3L1-205ENST00000409588 AHSPQ9NZD4 102 aa13.54□□□□□ -0.24
NIF3L1-205ENST00000409588 MYOTQ9UBF9 498 aa13.54□□□□□ -0.24
NIF3L1-205ENST00000409588 ZNF835Q9Y2P0 537 aa13.54□□□□□ -0.24
NIF3L1-205ENST00000409588 TRGV8A0A0C4DH27 118 aa13.53□□□□□ -0.24
NIF3L1-205ENST00000409588 CYSRT1A8MQ03 144 aa13.53□□□□□ -0.24
NIF3L1-205ENST00000409588 SLC19A2O60779 497 aa13.53□□□□□ -0.24
NIF3L1-205ENST00000409588 CLDN1O95832 211 aa13.53□□□□□ -0.24
NIF3L1-205ENST00000409588 SNRPAP09012 282 aaKnown RBP13.53□□□□□ -0.24
NIF3L1-205ENST00000409588 RNF224P0DH78 156 aa13.53□□□□□ -0.24
NIF3L1-205ENST00000409588 GALNSP34059 522 aa13.53□□□□□ -0.24
NIF3L1-205ENST00000409588 HNRNPFP52597 415 aaKnown RBP13.53□□□□□ -0.24
NIF3L1-205ENST00000409588 IGLV3-21P80748 117 aaPredicted RBP13.53□□□□□ -0.24
NIF3L1-205ENST00000409588 IRF9Q00978 393 aa13.53□□□□□ -0.24
NIF3L1-205ENST00000409588 TBL3Q12788 808 aaKnown RBP13.53□□□□□ -0.24
NIF3L1-205ENST00000409588 LAPTM4AQ15012 233 aa13.53□□□□□ -0.24
NIF3L1-205ENST00000409588 ZNF468Q5VIY5 522 aaPredicted RBP13.53□□□□□ -0.24
NIF3L1-205ENST00000409588 XKRXQ6PP77 449 aa13.53□□□□□ -0.24
NIF3L1-205ENST00000409588 ZNF793Q6ZN11 406 aa13.53□□□□□ -0.24
NIF3L1-205ENST00000409588 RGS9BPQ6ZS82 235 aa13.53□□□□□ -0.24
NIF3L1-205ENST00000409588 TRMT10CQ7L0Y3 403 aaKnown RBP13.53□□□□□ -0.24
NIF3L1-205ENST00000409588 ZGRF1Q86YA3 2104 aa13.53□□□□□ -0.24
NIF3L1-205ENST00000409588 MYLK4Q86YV6 388 aaPredicted RBP13.53□□□□□ -0.24
NIF3L1-205ENST00000409588 SPPL2CQ8IUH8 684 aa13.53□□□□□ -0.24
NIF3L1-205ENST00000409588 CYP4Z2PQ8N1L4 340 aa13.53□□□□□ -0.24
NIF3L1-205ENST00000409588 GHDCQ8N2G8 530 aa13.53□□□□□ -0.24
NIF3L1-205ENST00000409588 AMER2Q8N7J2 671 aa13.53□□□□□ -0.24
NIF3L1-205ENST00000409588 NOA1Q8NC60 698 aaKnown RBP13.53□□□□□ -0.24
NIF3L1-205ENST00000409588 TMEM52Q8NDY8 209 aa13.53□□□□□ -0.24
NIF3L1-205ENST00000409588 MYRIPQ8NFW9 859 aa13.53□□□□□ -0.24
NIF3L1-205ENST00000409588 C16orf52Q8NHV5 167 aa13.53□□□□□ -0.24
NIF3L1-205ENST00000409588 SGCZQ96LD1 299 aa13.53□□□□□ -0.24
NIF3L1-205ENST00000409588 PAFAH2Q99487 392 aa13.53□□□□□ -0.24
NIF3L1-205ENST00000409588 SERPINI1Q99574 410 aa13.53□□□□□ -0.24
NIF3L1-205ENST00000409588 OR51B5Q9H339 312 aa13.53□□□□□ -0.24
NIF3L1-205ENST00000409588 RPF2Q9H7B2 306 aaKnown RBP13.53□□□□□ -0.24
NIF3L1-205ENST00000409588 DDX31Q9H8H2 851 aaKnown RBP13.53□□□□□ -0.24
NIF3L1-205ENST00000409588 WDR41Q9HAD4 459 aa13.53□□□□□ -0.24
NIF3L1-205ENST00000409588 DMRT3Q9NQL9 472 aa13.53□□□□□ -0.24
NIF3L1-205ENST00000409588 LYARQ9NX58 379 aaKnown RBP13.53□□□□□ -0.24
NIF3L1-205ENST00000409588 COPS7AQ9UBW8 275 aa13.53□□□□□ -0.24
NIF3L1-205ENST00000409588 KLF2Q9Y5W3 355 aaPredicted RBP13.53□□□□□ -0.24
NIF3L1-205ENST00000409588 A1L4Q6 167 aa13.52□□□□□ -0.25
NIF3L1-205ENST00000409588 C17orf105B2RV13 164 aa13.52□□□□□ -0.25
NIF3L1-205ENST00000409588 CCL21O00585 134 aa13.52□□□□□ -0.25
NIF3L1-205ENST00000409588 PROM1O43490 865 aa13.52□□□□□ -0.25
NIF3L1-205ENST00000409588 SEMA3DO95025 777 aa13.52□□□□□ -0.25
NIF3L1-205ENST00000409588 ABHD2P08910 425 aa13.52□□□□□ -0.25
NIF3L1-205ENST00000409588 ZNF24P17028 368 aa13.52□□□□□ -0.25
NIF3L1-205ENST00000409588 STT3AP46977 705 aa13.52□□□□□ -0.25
NIF3L1-205ENST00000409588 CPSF6Q16630 551 aaKnown RBP eCLIP13.52□□□□□ -0.25
NIF3L1-205ENST00000409588 MPEG1Q2M385 716 aa13.52□□□□□ -0.25
NIF3L1-205ENST00000409588 TECRLQ5HYJ1 363 aa13.52□□□□□ -0.25
NIF3L1-205ENST00000409588 C1QL3Q5VWW1 255 aa13.52□□□□□ -0.25
NIF3L1-205ENST00000409588 ADNP2Q6IQ32 1131 aa13.52□□□□□ -0.25
NIF3L1-205ENST00000409588 PAOXQ6QHF9 649 aa13.52□□□□□ -0.25
NIF3L1-205ENST00000409588 TIFABQ6ZNK6 161 aa13.52□□□□□ -0.25
NIF3L1-205ENST00000409588 GOLGA7Q7Z5G4 137 aa13.52□□□□□ -0.25
NIF3L1-205ENST00000409588 CLNKQ7Z7G1 428 aa13.52□□□□□ -0.25
NIF3L1-205ENST00000409588 ZNF227Q86WZ6 799 aa13.52□□□□□ -0.25
NIF3L1-205ENST00000409588 SIAH3Q8IW03 269 aa13.52□□□□□ -0.25
NIF3L1-205ENST00000409588 ZNF808Q8N4W9 903 aaPredicted RBP13.52□□□□□ -0.25
NIF3L1-205ENST00000409588 SLC15A4Q8N697 577 aa13.52□□□□□ -0.25
NIF3L1-205ENST00000409588 ASB15Q8WXK1 588 aa13.52□□□□□ -0.25
NIF3L1-205ENST00000409588 ANKRD9Q96BM1 317 aaPredicted RBP13.52□□□□□ -0.25
NIF3L1-205ENST00000409588 MAGED4Q96JG8 741 aa13.52□□□□□ -0.25
NIF3L1-205ENST00000409588 CSF3RQ99062 836 aa13.52□□□□□ -0.25
NIF3L1-205ENST00000409588 MTERF1Q99551 399 aaKnown RBP13.52□□□□□ -0.25
NIF3L1-205ENST00000409588 MRPL46Q9H2W6 279 aaKnown RBP13.52□□□□□ -0.25
NIF3L1-205ENST00000409588 NMRK1Q9NWW6 199 aa13.52□□□□□ -0.25
NIF3L1-205ENST00000409588 CPSF2Q9P2I0 782 aaKnown RBP13.52□□□□□ -0.25
NIF3L1-205ENST00000409588 FETUBQ9UGM5 382 aa13.52□□□□□ -0.25
NIF3L1-205ENST00000409588 ERVK-11Q9UQG0 969 aa13.52□□□□□ -0.25
NIF3L1-205ENST00000409588 SVILO95425 2214 aa13.52□□□□□ -0.25
NIF3L1-205ENST00000409588 UNC79Q9P2D8 2635 aa13.51□□□□□ -0.25
NIF3L1-205ENST00000409588 A8MVJ9 347 aa13.51□□□□□ -0.25
NIF3L1-205ENST00000409588 NPIPA5E9PKD4 350 aa13.51□□□□□ -0.25
NIF3L1-205ENST00000409588 POC1B-GALNT4F8VUJ3 575 aa13.51□□□□□ -0.25
NIF3L1-205ENST00000409588 TGFBR3LH3BV60 316 aa13.51□□□□□ -0.25
NIF3L1-205ENST00000409588 PLPP1O14494 284 aa13.51□□□□□ -0.25
NIF3L1-205ENST00000409588 PEX1O43933 1283 aa13.51□□□□□ -0.25
NIF3L1-205ENST00000409588 ZG16O60844 167 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms