RNA–Protein interactions for RNA: ENST00000409064.5

KDM3A-202, Transcript of lysine demethylase 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KDM3A, Length 4,621 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3A-202ENST00000409064 HUS1BQ8NHY5 278 aa9.65□□□□□ -0.86
KDM3A-202ENST00000409064 MACROD1Q9BQ69 325 aa9.65□□□□□ -0.86
KDM3A-202ENST00000409064 TIMM29Q9BSF4 260 aa9.65□□□□□ -0.86
KDM3A-202ENST00000409064 POT1Q9NUX5 634 aa9.65□□□□□ -0.86
KDM3A-202ENST00000409064 TSC22D4Q9Y3Q8 395 aa9.65□□□□□ -0.86
KDM3A-202ENST00000409064 DNMT3AQ9Y6K1 912 aaPredicted RBP9.65□□□□□ -0.86
KDM3A-202ENST00000409064 ADAMTSL1Q8N6G6 1762 aa9.65□□□□□ -0.86
KDM3A-202ENST00000409064 RP1P56715 2156 aa9.65□□□□□ -0.86
KDM3A-202ENST00000409064 G3V2T6 193 aa9.65□□□□□ -0.86
KDM3A-202ENST00000409064 BLOC1S5-TXNDC5H3BN57 136 aa9.65□□□□□ -0.86
KDM3A-202ENST00000409064 CPNE6O95741 557 aa9.65□□□□□ -0.86
KDM3A-202ENST00000409064 PORP16435 677 aaPredicted RBP9.65□□□□□ -0.86
KDM3A-202ENST00000409064 RORAP35398 523 aa9.65□□□□□ -0.86
KDM3A-202ENST00000409064 RNF144AP50876 292 aaPredicted RBP9.65□□□□□ -0.86
KDM3A-202ENST00000409064 CDH15P55291 814 aa9.65□□□□□ -0.86
KDM3A-202ENST00000409064 DEFA1P59665 94 aa9.65□□□□□ -0.86
KDM3A-202ENST00000409064 DEFA3P59666 94 aa9.65□□□□□ -0.86
KDM3A-202ENST00000409064 TARDBPQ13148 414 aaKnown RBP eCLIP9.65□□□□□ -0.86
KDM3A-202ENST00000409064 TMEM35AQ53FP2 167 aa9.65□□□□□ -0.86
KDM3A-202ENST00000409064 KDELC1Q6UW63 502 aa9.65□□□□□ -0.86
KDM3A-202ENST00000409064 RFLNAQ6ZTI6 216 aa9.65□□□□□ -0.86
KDM3A-202ENST00000409064 THAP5Q7Z6K1 395 aa9.65□□□□□ -0.86
KDM3A-202ENST00000409064 CANT1Q8WVQ1 401 aa9.65□□□□□ -0.86
KDM3A-202ENST00000409064 COX4I2Q96KJ9 171 aa9.65□□□□□ -0.86
KDM3A-202ENST00000409064 FCRL4Q96PJ5 515 aa9.65□□□□□ -0.86
KDM3A-202ENST00000409064 MKRN2Q9H000 416 aaKnown RBP9.65□□□□□ -0.86
KDM3A-202ENST00000409064 REEP4Q9H6H4 257 aa9.65□□□□□ -0.86
KDM3A-202ENST00000409064 B3GAT2Q9NPZ5 323 aa9.65□□□□□ -0.86
KDM3A-202ENST00000409064 SMPD3Q9NY59 655 aaPredicted RBP9.65□□□□□ -0.86
KDM3A-202ENST00000409064 HYKKA2RU49 373 aa9.65□□□□□ -0.87
KDM3A-202ENST00000409064 HMX2A2RU54 273 aa9.65□□□□□ -0.87
KDM3A-202ENST00000409064 AQP12BA6NM10 295 aa9.65□□□□□ -0.87
KDM3A-202ENST00000409064 NPIPA5E9PKD4 350 aa9.65□□□□□ -0.87
KDM3A-202ENST00000409064 SIGLEC6O43699 453 aa9.65□□□□□ -0.87
KDM3A-202ENST00000409064 NUAK1O60285 661 aa9.65□□□□□ -0.87
KDM3A-202ENST00000409064 GPIP06744 558 aa9.65□□□□□ -0.87
KDM3A-202ENST00000409064 CBLP22681 906 aa9.65□□□□□ -0.87
KDM3A-202ENST00000409064 C1orf94Q6P1W5 598 aa9.65□□□□□ -0.87
KDM3A-202ENST00000409064 FRRS1Q6ZNA5 592 aa9.65□□□□□ -0.87
KDM3A-202ENST00000409064 AQP12AQ8IXF9 295 aa9.65□□□□□ -0.87
KDM3A-202ENST00000409064 LRRC25Q8N386 305 aaPredicted RBP9.65□□□□□ -0.87
KDM3A-202ENST00000409064 RASGEF1AQ8N9B8 481 aa9.65□□□□□ -0.87
KDM3A-202ENST00000409064 OR52E4Q8NGH9 312 aa9.65□□□□□ -0.87
KDM3A-202ENST00000409064 OR14L1PQ8NHC6 308 aa9.65□□□□□ -0.87
KDM3A-202ENST00000409064 KCNN1Q92952 543 aa9.65□□□□□ -0.87
KDM3A-202ENST00000409064 MUC13Q9H3R2 512 aa9.65□□□□□ -0.87
KDM3A-202ENST00000409064 TIGARQ9NQ88 270 aa9.65□□□□□ -0.87
KDM3A-202ENST00000409064 UPB1Q9UBR1 384 aa9.65□□□□□ -0.87
KDM3A-202ENST00000409064 NPIPA1Q9UND3 350 aa9.65□□□□□ -0.87
KDM3A-202ENST00000409064 CACNA1HO95180 2353 aa9.64□□□□□ -0.87
KDM3A-202ENST00000409064 WASHC1A8K0Z3 465 aa9.64□□□□□ -0.87
KDM3A-202ENST00000409064 ARHGEF33A8MVX0 844 aa9.64□□□□□ -0.87
KDM3A-202ENST00000409064 PLD2O14939 933 aa9.64□□□□□ -0.87
KDM3A-202ENST00000409064 RENP00797 406 aa9.64□□□□□ -0.87
KDM3A-202ENST00000409064 DNASE1L1P49184 302 aa9.64□□□□□ -0.87
KDM3A-202ENST00000409064 ADPRHP54922 357 aa9.64□□□□□ -0.87
KDM3A-202ENST00000409064 MERTKQ12866 999 aa9.64□□□□□ -0.87
KDM3A-202ENST00000409064 PTPRRQ15256 657 aa9.64□□□□□ -0.87
KDM3A-202ENST00000409064 WASH2PQ6VEQ5 465 aa9.64□□□□□ -0.87
KDM3A-202ENST00000409064 IKBIPQ70UQ0 350 aa9.64□□□□□ -0.87
KDM3A-202ENST00000409064 DENND6BQ8NEG7 585 aa9.64□□□□□ -0.87
KDM3A-202ENST00000409064 OR2L2Q8NH16 312 aa9.64□□□□□ -0.87
KDM3A-202ENST00000409064 BIRC7Q96CA5 298 aa9.64□□□□□ -0.87
KDM3A-202ENST00000409064 MOCOSQ96EN8 888 aa9.64□□□□□ -0.87
KDM3A-202ENST00000409064 OR6C1Q96RD1 312 aa9.64□□□□□ -0.87
KDM3A-202ENST00000409064 OLFM1Q99784 485 aa9.64□□□□□ -0.87
KDM3A-202ENST00000409064 ASPNQ9BXN1 380 aa9.64□□□□□ -0.87
KDM3A-202ENST00000409064 ZNF304Q9HCX3 659 aa9.64□□□□□ -0.87
KDM3A-202ENST00000409064 MTMR10Q9NXD2 777 aa9.64□□□□□ -0.87
KDM3A-202ENST00000409064 NBASA2RRP1 2371 aa9.64□□□□□ -0.87
KDM3A-202ENST00000409064 HTRA2O43464 458 aaPredicted RBP9.64□□□□□ -0.87
KDM3A-202ENST00000409064 PTNP21246 168 aa9.64□□□□□ -0.87
KDM3A-202ENST00000409064 ST13P50502 369 aaKnown RBP9.64□□□□□ -0.87
KDM3A-202ENST00000409064 MS4A2Q01362 244 aa9.64□□□□□ -0.87
KDM3A-202ENST00000409064 PTGES3Q15185 160 aaKnown RBP9.64□□□□□ -0.87
KDM3A-202ENST00000409064 MAPK14Q16539 360 aa9.64□□□□□ -0.87
KDM3A-202ENST00000409064 ZNF678Q5SXM1 525 aa9.64□□□□□ -0.87
KDM3A-202ENST00000409064 MAVSQ7Z434 540 aa9.64□□□□□ -0.87
KDM3A-202ENST00000409064 CEP97Q8IW35 865 aa9.64□□□□□ -0.87
KDM3A-202ENST00000409064 SLC34A3Q8N130 599 aa9.64□□□□□ -0.87
KDM3A-202ENST00000409064 MFSD2AQ8NA29 543 aa9.64□□□□□ -0.87
KDM3A-202ENST00000409064 PUM2Q8TB72 1066 aaKnown RBP eCLIP9.64□□□□□ -0.872e-7■■■■■ 33
KDM3A-202ENST00000409064 ARRDC2Q8TBH0 407 aa9.64□□□□□ -0.87
KDM3A-202ENST00000409064 ALOXE3Q9BYJ1 711 aa9.64□□□□□ -0.87
KDM3A-202ENST00000409064 LIN28AQ9H9Z2 209 aaKnown RBP9.64□□□□□ -0.87
KDM3A-202ENST00000409064 HMG20AQ9NP66 347 aa9.64□□□□□ -0.87
KDM3A-202ENST00000409064 TUBA8Q9NY65 449 aaPredicted RBP9.64□□□□□ -0.87
KDM3A-202ENST00000409064 ADAM30Q9UKF2 790 aa9.64□□□□□ -0.87
KDM3A-202ENST00000409064 FOCADQ5VW36 1801 aa9.64□□□□□ -0.87
KDM3A-202ENST00000409064 MYO10Q9HD67 2058 aa9.64□□□□□ -0.87
KDM3A-202ENST00000409064 SGK494L7N484 410 aa9.64□□□□□ -0.87
KDM3A-202ENST00000409064 SDHDO14521 159 aa9.64□□□□□ -0.87
KDM3A-202ENST00000409064 CD63P08962 238 aa9.64□□□□□ -0.87
KDM3A-202ENST00000409064 TIA1P31483 386 aaKnown RBP eCLIP9.64□□□□□ -0.879e-7■□□□□ 9.5
KDM3A-202ENST00000409064 RPS9P46781 194 aaKnown RBP9.64□□□□□ -0.87
KDM3A-202ENST00000409064 RAB15P59190 212 aa9.64□□□□□ -0.87
KDM3A-202ENST00000409064 RPS3AP61247 264 aaKnown RBP9.64□□□□□ -0.87
KDM3A-202ENST00000409064 UFM1P61960 85 aa9.64□□□□□ -0.87
KDM3A-202ENST00000409064 FOXK1P85037 733 aa9.64□□□□□ -0.87
KDM3A-202ENST00000409064 PTGR1Q14914 329 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms