RNA–Protein interactions for RNA: ENST00000408314.1

SNORD88A-201, Transcript of small nucleolar RNA, C/D box 88A, humanhuman

BASIC

Gene SNORD88A, Length 91 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88A-201ENST00000408314 ARHGAP10A1A4S6 786 aa8.46□□□□□ -1.06
SNORD88A-201ENST00000408314 C17orf105B2RV13 164 aa8.46□□□□□ -1.06
SNORD88A-201ENST00000408314 NPIPA5E9PKD4 350 aa8.46□□□□□ -1.06
SNORD88A-201ENST00000408314 FOXE1O00358 373 aaPredicted RBP8.46□□□□□ -1.06
SNORD88A-201ENST00000408314 CCL21O00585 134 aa8.46□□□□□ -1.06
SNORD88A-201ENST00000408314 PRRG2O14669 202 aa8.46□□□□□ -1.06
SNORD88A-201ENST00000408314 ASNA1O43681 348 aa8.46□□□□□ -1.06
SNORD88A-201ENST00000408314 PRAMEF4O60810 478 aa8.46□□□□□ -1.06
SNORD88A-201ENST00000408314 GUCY1B2O75343 617 aa8.46□□□□□ -1.06
SNORD88A-201ENST00000408314 TGFB1P01137 390 aa8.46□□□□□ -1.06
SNORD88A-201ENST00000408314 ABHD2P08910 425 aa8.46□□□□□ -1.06
SNORD88A-201ENST00000408314 RNF224P0DH78 156 aa8.46□□□□□ -1.06
SNORD88A-201ENST00000408314 AGAP20933 346 aa8.46□□□□□ -1.06
SNORD88A-201ENST00000408314 MST1P26927 711 aa8.46□□□□□ -1.06
SNORD88A-201ENST00000408314 MAGEA12P43365 314 aa8.46□□□□□ -1.06
SNORD88A-201ENST00000408314 STT3AP46977 705 aa8.46□□□□□ -1.06
SNORD88A-201ENST00000408314 CCNG1P51959 295 aa8.46□□□□□ -1.06
SNORD88A-201ENST00000408314 IRF9Q00978 393 aa8.46□□□□□ -1.06
SNORD88A-201ENST00000408314 TNFRSF17Q02223 184 aa8.46□□□□□ -1.06
SNORD88A-201ENST00000408314 SLAMF1Q13291 335 aa8.46□□□□□ -1.06
SNORD88A-201ENST00000408314 ART3Q13508 389 aa8.46□□□□□ -1.06
SNORD88A-201ENST00000408314 PRAMEF9Q5VWM5 478 aa8.46□□□□□ -1.06
SNORD88A-201ENST00000408314 TTC19Q6DKK2 380 aaPredicted RBP8.46□□□□□ -1.06
SNORD88A-201ENST00000408314 XKRXQ6PP77 449 aa8.46□□□□□ -1.06
SNORD88A-201ENST00000408314 PAOXQ6QHF9 649 aa8.46□□□□□ -1.06
SNORD88A-201ENST00000408314 OPN5Q6U736 354 aa8.46□□□□□ -1.06
SNORD88A-201ENST00000408314 CYP20A1Q6UW02 462 aa8.46□□□□□ -1.06
SNORD88A-201ENST00000408314 RGS9BPQ6ZS82 235 aa8.46□□□□□ -1.06
SNORD88A-201ENST00000408314 GK5Q6ZS86 529 aa8.46□□□□□ -1.06
SNORD88A-201ENST00000408314 TRMT10CQ7L0Y3 403 aaKnown RBP8.46□□□□□ -1.06
SNORD88A-201ENST00000408314 PAGE2Q7Z2X7 111 aa8.46□□□□□ -1.06
SNORD88A-201ENST00000408314 GOLGA7Q7Z5G4 137 aa8.46□□□□□ -1.06
SNORD88A-201ENST00000408314 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.46□□□□□ -1.06
SNORD88A-201ENST00000408314 GPR180Q86V85 440 aa8.46□□□□□ -1.06
SNORD88A-201ENST00000408314 DND1Q8IYX4 353 aaKnown RBP8.46□□□□□ -1.06
SNORD88A-201ENST00000408314 PTGR2Q8N8N7 351 aaPredicted RBP8.46□□□□□ -1.06
SNORD88A-201ENST00000408314 L3MBTL4Q8NA19 623 aa8.46□□□□□ -1.06
SNORD88A-201ENST00000408314 SLC22A8Q8TCC7 542 aa8.46□□□□□ -1.06
SNORD88A-201ENST00000408314 RBM18Q96H35 190 aaKnown RBP8.46□□□□□ -1.06
SNORD88A-201ENST00000408314 SGCZQ96LD1 299 aa8.46□□□□□ -1.06
SNORD88A-201ENST00000408314 CSF3RQ99062 836 aa8.46□□□□□ -1.06
SNORD88A-201ENST00000408314 MRPL57Q9BQC6 102 aaKnown RBP8.46□□□□□ -1.06
SNORD88A-201ENST00000408314 OR8D2Q9GZM6 311 aa8.46□□□□□ -1.06
SNORD88A-201ENST00000408314 OR51B5Q9H339 312 aa8.46□□□□□ -1.06
SNORD88A-201ENST00000408314 RPF2Q9H7B2 306 aaKnown RBP8.46□□□□□ -1.06
SNORD88A-201ENST00000408314 CHST11Q9NPF2 352 aa8.46□□□□□ -1.06
SNORD88A-201ENST00000408314 NMRK1Q9NWW6 199 aa8.46□□□□□ -1.06
SNORD88A-201ENST00000408314 KCMF1Q9P0J7 381 aa8.46□□□□□ -1.06
SNORD88A-201ENST00000408314 MYOTQ9UBF9 498 aa8.46□□□□□ -1.06
SNORD88A-201ENST00000408314 NPIPA1Q9UND3 350 aa8.46□□□□□ -1.06
SNORD88A-201ENST00000408314 ENTPD4Q9Y227 616 aa8.46□□□□□ -1.06
SNORD88A-201ENST00000408314 STK38LQ9Y2H1 464 aa8.46□□□□□ -1.06
SNORD88A-201ENST00000408314 ASB1Q9Y576 335 aa8.46□□□□□ -1.06
SNORD88A-201ENST00000408314 KLF2Q9Y5W3 355 aaPredicted RBP8.46□□□□□ -1.06
SNORD88A-201ENST00000408314 NOTCH2Q04721 2471 aa8.45□□□□□ -1.06
SNORD88A-201ENST00000408314 POC1B-GALNT4F8VUJ3 575 aa8.45□□□□□ -1.06
SNORD88A-201ENST00000408314 RTCAO00442 366 aaKnown RBP8.45□□□□□ -1.06
SNORD88A-201ENST00000408314 HNRNPRO43390 633 aaKnown RBP8.45□□□□□ -1.06
SNORD88A-201ENST00000408314 PEX1O43933 1283 aa8.45□□□□□ -1.06
SNORD88A-201ENST00000408314 OR10H2O60403 315 aa8.45□□□□□ -1.06
SNORD88A-201ENST00000408314 MAN1A2O60476 641 aa8.45□□□□□ -1.06
SNORD88A-201ENST00000408314 ZG16O60844 167 aa8.45□□□□□ -1.06
SNORD88A-201ENST00000408314 CLDN1O95832 211 aa8.45□□□□□ -1.06
SNORD88A-201ENST00000408314 TBX6O95947 436 aaPredicted RBP8.45□□□□□ -1.06
SNORD88A-201ENST00000408314 OTCP00480 354 aa8.45□□□□□ -1.06
SNORD88A-201ENST00000408314 SNRPAP09012 282 aaKnown RBP8.45□□□□□ -1.06
SNORD88A-201ENST00000408314 NR2F6P10588 404 aa8.45□□□□□ -1.06
SNORD88A-201ENST00000408314 ALOX15P16050 662 aaPredicted RBP8.45□□□□□ -1.06
SNORD88A-201ENST00000408314 TAC1P20366 129 aa8.45□□□□□ -1.06
SNORD88A-201ENST00000408314 GALNSP34059 522 aa8.45□□□□□ -1.06
SNORD88A-201ENST00000408314 MEOX1P50221 254 aa8.45□□□□□ -1.06
SNORD88A-201ENST00000408314 GPR143P51810 404 aa8.45□□□□□ -1.06
SNORD88A-201ENST00000408314 HNRNPFP52597 415 aaKnown RBP8.45□□□□□ -1.06
SNORD88A-201ENST00000408314 IGLV3-21P80748 117 aaPredicted RBP8.45□□□□□ -1.06
SNORD88A-201ENST00000408314 IFT88Q13099 833 aa8.45□□□□□ -1.06
SNORD88A-201ENST00000408314 CPSF6Q16630 551 aaKnown RBP eCLIP8.45□□□□□ -1.06
SNORD88A-201ENST00000408314 GGTA1PQ4G0N0 100 aa8.45□□□□□ -1.06
SNORD88A-201ENST00000408314 OR52E8Q6IFG1 317 aa8.45□□□□□ -1.06
SNORD88A-201ENST00000408314 ADNP2Q6IQ32 1131 aa8.45□□□□□ -1.06
SNORD88A-201ENST00000408314 ZNF793Q6ZN11 406 aa8.45□□□□□ -1.06
SNORD88A-201ENST00000408314 Q6ZPB1 254 aaPredicted RBP8.45□□□□□ -1.06
SNORD88A-201ENST00000408314 RTL4Q6ZR62 310 aa8.45□□□□□ -1.06
SNORD88A-201ENST00000408314 SLC29A4Q7RTT9 530 aa8.45□□□□□ -1.06
SNORD88A-201ENST00000408314 UBE3DQ7Z6J8 389 aa8.45□□□□□ -1.06
SNORD88A-201ENST00000408314 SPPL2CQ8IUH8 684 aa8.45□□□□□ -1.06
SNORD88A-201ENST00000408314 ST13P4Q8IZP2 240 aaPredicted RBP8.45□□□□□ -1.06
SNORD88A-201ENST00000408314 SHISA5Q8N114 240 aa8.45□□□□□ -1.06
SNORD88A-201ENST00000408314 GOLM1Q8NBJ4 401 aa8.45□□□□□ -1.06
SNORD88A-201ENST00000408314 NOA1Q8NC60 698 aaKnown RBP8.45□□□□□ -1.06
SNORD88A-201ENST00000408314 PSD4Q8NDX1 1056 aa8.45□□□□□ -1.06
SNORD88A-201ENST00000408314 TMEM52Q8NDY8 209 aa8.45□□□□□ -1.06
SNORD88A-201ENST00000408314 NUBPLQ8TB37 319 aa8.45□□□□□ -1.06
SNORD88A-201ENST00000408314 PHF10Q8WUB8 498 aaKnown RBP8.45□□□□□ -1.06
SNORD88A-201ENST00000408314 FBXL20Q96IG2 436 aa8.45□□□□□ -1.06
SNORD88A-201ENST00000408314 MTERF1Q99551 399 aaKnown RBP8.45□□□□□ -1.06
SNORD88A-201ENST00000408314 MAPKAP1Q9BPZ7 522 aa8.45□□□□□ -1.06
SNORD88A-201ENST00000408314 NTMT1Q9BV86 223 aa8.45□□□□□ -1.06
SNORD88A-201ENST00000408314 ELOVL6Q9H5J4 265 aa8.45□□□□□ -1.06
SNORD88A-201ENST00000408314 DDX31Q9H8H2 851 aaKnown RBP8.45□□□□□ -1.06
SNORD88A-201ENST00000408314 XPR1Q9UBH6 696 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms