RNA–Protein interactions for RNA: ENST00000403971.2

HMGB3P19-201, Transcript of high mobility group box 3 pseudogene 19, humanhuman

BASIC

Gene HMGB3P19, Length 560 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P19-201ENST00000403971 HOXC13P31276 330 aa4.42□□□□□ -1.7
HMGB3P19-201ENST00000403971 CSTF2P33240 577 aaKnown RBP eCLIP4.42□□□□□ -1.7
HMGB3P19-201ENST00000403971 CDKN1AP38936 164 aa4.42□□□□□ -1.7
HMGB3P19-201ENST00000403971 GPC3P51654 580 aa4.42□□□□□ -1.7
HMGB3P19-201ENST00000403971 VAMP7P51809 220 aa4.42□□□□□ -1.7
HMGB3P19-201ENST00000403971 BMXP51813 675 aa4.42□□□□□ -1.7
HMGB3P19-201ENST00000403971 MTCP1P56278 107 aa4.42□□□□□ -1.7
HMGB3P19-201ENST00000403971 PTENP60484 403 aa4.42□□□□□ -1.7
HMGB3P19-201ENST00000403971 TPM4P67936 248 aa4.42□□□□□ -1.7
HMGB3P19-201ENST00000403971 TUBB4BP68371 445 aa4.42□□□□□ -1.7
HMGB3P19-201ENST00000403971 FKBP3Q00688 224 aaKnown RBP4.42□□□□□ -1.7
HMGB3P19-201ENST00000403971 ENPEPQ07075 957 aa4.42□□□□□ -1.7
HMGB3P19-201ENST00000403971 SPAG1Q07617 926 aa4.42□□□□□ -1.7
HMGB3P19-201ENST00000403971 LAMTOR4Q0VGL1 99 aa4.42□□□□□ -1.7
HMGB3P19-201ENST00000403971 DRP2Q13474 957 aa4.42□□□□□ -1.7
HMGB3P19-201ENST00000403971 SCARB2Q14108 478 aa4.42□□□□□ -1.7
HMGB3P19-201ENST00000403971 PTGISQ16647 500 aa4.42□□□□□ -1.7
HMGB3P19-201ENST00000403971 PHKG1Q16816 387 aa4.42□□□□□ -1.7
HMGB3P19-201ENST00000403971 FFAR4Q5NUL3 377 aa4.42□□□□□ -1.7
HMGB3P19-201ENST00000403971 C9orf50Q5SZB4 431 aa4.42□□□□□ -1.7
HMGB3P19-201ENST00000403971 FAM91A1Q658Y4 838 aa4.42□□□□□ -1.7
HMGB3P19-201ENST00000403971 KRTAP5-3Q6L8H2 238 aa4.42□□□□□ -1.7
HMGB3P19-201ENST00000403971 DNAH12Q6ZR08 3092 aa4.42□□□□□ -1.7
HMGB3P19-201ENST00000403971 IL17RELQ6ZVW7 336 aa4.42□□□□□ -1.7
HMGB3P19-201ENST00000403971 SPATA19Q7Z5L4 167 aa4.42□□□□□ -1.7
HMGB3P19-201ENST00000403971 SERINC5Q86VE9 423 aa4.42□□□□□ -1.7
HMGB3P19-201ENST00000403971 ZBTB8OSQ8IWT0 167 aa4.42□□□□□ -1.7
HMGB3P19-201ENST00000403971 C12orf56Q8IXR9 622 aa4.42□□□□□ -1.7
HMGB3P19-201ENST00000403971 METTL13Q8N6R0 699 aa4.42□□□□□ -1.7
HMGB3P19-201ENST00000403971 OR2T11Q8NH01 316 aa4.42□□□□□ -1.7
HMGB3P19-201ENST00000403971 U2AF1L4Q8WU68 220 aaKnown RBP4.42□□□□□ -1.7
HMGB3P19-201ENST00000403971 HEXDCQ8WVB3 486 aa4.42□□□□□ -1.7
HMGB3P19-201ENST00000403971 NELFBQ8WX92 580 aa4.42□□□□□ -1.7
HMGB3P19-201ENST00000403971 ST6GALNAC6Q969X2 333 aa4.42□□□□□ -1.7
HMGB3P19-201ENST00000403971 PRAC1Q96KF2 57 aa4.42□□□□□ -1.7
HMGB3P19-201ENST00000403971 DEFB118Q96PH6 123 aa4.42□□□□□ -1.7
HMGB3P19-201ENST00000403971 ACCSQ96QU6 501 aa4.42□□□□□ -1.7
HMGB3P19-201ENST00000403971 TSG101Q99816 390 aa4.42□□□□□ -1.7
HMGB3P19-201ENST00000403971 ADPGKQ9BRR6 497 aa4.42□□□□□ -1.7
HMGB3P19-201ENST00000403971 THUMPD3Q9BV44 507 aaKnown RBP4.42□□□□□ -1.7
HMGB3P19-201ENST00000403971 THAP9Q9H5L6 903 aa4.42□□□□□ -1.7
HMGB3P19-201ENST00000403971 FLRT3Q9NZU0 649 aa4.42□□□□□ -1.7
HMGB3P19-201ENST00000403971 GRIN2DO15399 1336 aa4.42□□□□□ -1.7
HMGB3P19-201ENST00000403971 MROH7Q68CQ1 1323 aa4.42□□□□□ -1.7
HMGB3P19-201ENST00000403971 ADGRA3Q8IWK6 1321 aa4.42□□□□□ -1.7
HMGB3P19-201ENST00000403971 A0A087WV48 116 aa4.41□□□□□ -1.7
HMGB3P19-201ENST00000403971 TRAV24A0A0B4J272 114 aa4.41□□□□□ -1.7
HMGB3P19-201ENST00000403971 LRRIQ4A6NIV6 560 aa4.41□□□□□ -1.7
HMGB3P19-201ENST00000403971 CCDC169A6NNP5 214 aa4.41□□□□□ -1.7
HMGB3P19-201ENST00000403971 FPGTO14772 594 aa4.41□□□□□ -1.7
HMGB3P19-201ENST00000403971 CETN3O15182 167 aa4.41□□□□□ -1.7
HMGB3P19-201ENST00000403971 SLC16A4O15374 487 aa4.41□□□□□ -1.7
HMGB3P19-201ENST00000403971 CALUO43852 315 aaPredicted RBP4.41□□□□□ -1.7
HMGB3P19-201ENST00000403971 PCDH7O60245 1069 aa4.41□□□□□ -1.7
HMGB3P19-201ENST00000403971 GNA14O95837 355 aa4.41□□□□□ -1.7
HMGB3P19-201ENST00000403971 EDN1P05305 212 aa4.41□□□□□ -1.7
HMGB3P19-201ENST00000403971 LBPP18428 481 aa4.41□□□□□ -1.7
HMGB3P19-201ENST00000403971 ANOS1P23352 680 aa4.41□□□□□ -1.7
HMGB3P19-201ENST00000403971 WNT5AP41221 380 aa4.41□□□□□ -1.7
HMGB3P19-201ENST00000403971 CRYBB1P53674 252 aaPredicted RBP4.41□□□□□ -1.7
HMGB3P19-201ENST00000403971 RBP5P82980 135 aa4.41□□□□□ -1.7
HMGB3P19-201ENST00000403971 POU5F1Q01860 360 aaKnown RBP4.41□□□□□ -1.7
HMGB3P19-201ENST00000403971 KLC1Q07866 573 aa4.41□□□□□ -1.7
HMGB3P19-201ENST00000403971 MAPK6Q16659 721 aa4.41□□□□□ -1.7
HMGB3P19-201ENST00000403971 TPD52L1Q16890 204 aaPredicted RBP4.41□□□□□ -1.7
HMGB3P19-201ENST00000403971 LRRC73Q5JTD7 316 aa4.41□□□□□ -1.7
HMGB3P19-201ENST00000403971 SLC35D3Q5M8T2 416 aa4.41□□□□□ -1.7
HMGB3P19-201ENST00000403971 HECTD3Q5T447 861 aa4.41□□□□□ -1.7
HMGB3P19-201ENST00000403971 ARHGAP17Q68EM7 881 aa4.41□□□□□ -1.7
HMGB3P19-201ENST00000403971 KLHL10Q6JEL2 608 aa4.41□□□□□ -1.7
HMGB3P19-201ENST00000403971 PET117Q6UWS5 81 aa4.41□□□□□ -1.7
HMGB3P19-201ENST00000403971 SPATA21Q7Z572 469 aa4.41□□□□□ -1.7
HMGB3P19-201ENST00000403971 LUZP1Q86V48 1076 aa4.41□□□□□ -1.7
HMGB3P19-201ENST00000403971 SYCP3Q8IZU3 236 aa4.41□□□□□ -1.7
HMGB3P19-201ENST00000403971 APCDD1Q8J025 514 aa4.41□□□□□ -1.7
HMGB3P19-201ENST00000403971 OR8H3Q8N146 312 aa4.41□□□□□ -1.7
HMGB3P19-201ENST00000403971 CSGALNACT2Q8N6G5 542 aa4.41□□□□□ -1.7
HMGB3P19-201ENST00000403971 RNF149Q8NC42 400 aa4.41□□□□□ -1.7
HMGB3P19-201ENST00000403971 ANKRD20A12PQ8NF67 263 aa4.41□□□□□ -1.7
HMGB3P19-201ENST00000403971 GOT1L1Q8NHS2 421 aaPredicted RBP4.41□□□□□ -1.7
HMGB3P19-201ENST00000403971 DEPDC1BQ8WUY9 529 aa4.41□□□□□ -1.7
HMGB3P19-201ENST00000403971 F2RL3Q96RI0 385 aa4.41□□□□□ -1.7
HMGB3P19-201ENST00000403971 FGFBP2Q9BYJ0 223 aa4.41□□□□□ -1.7
HMGB3P19-201ENST00000403971 HSD3B7Q9H2F3 369 aa4.41□□□□□ -1.7
HMGB3P19-201ENST00000403971 GRPEL1Q9HAV7 217 aa4.41□□□□□ -1.7
HMGB3P19-201ENST00000403971 TRPV4Q9HBA0 871 aa4.41□□□□□ -1.7
HMGB3P19-201ENST00000403971 POLD4Q9HCU8 107 aa4.41□□□□□ -1.7
HMGB3P19-201ENST00000403971 ZNF71Q9NQZ8 489 aaPredicted RBP4.41□□□□□ -1.7
HMGB3P19-201ENST00000403971 GSN-AS1Q9NRJ2 163 aa4.41□□□□□ -1.7
HMGB3P19-201ENST00000403971 DMAC2Q9NW81 257 aa4.41□□□□□ -1.7
HMGB3P19-201ENST00000403971 SNX7Q9UNH6 387 aa4.41□□□□□ -1.7
HMGB3P19-201ENST00000403971 STYXL1Q9Y6J8 313 aa4.41□□□□□ -1.7
HMGB3P19-201ENST00000403971 SCN1AP35498 2009 aa4.41□□□□□ -1.7
HMGB3P19-201ENST00000403971 LTBP2Q14767 1821 aa4.4□□□□□ -1.7
HMGB3P19-201ENST00000403971 GIMAP1-GIMAP5A0A087WTJ2 511 aa4.4□□□□□ -1.71
HMGB3P19-201ENST00000403971 A0A1W2PPW3 197 aa4.4□□□□□ -1.71
HMGB3P19-201ENST00000403971 HTR3EA5X5Y0 456 aa4.4□□□□□ -1.71
HMGB3P19-201ENST00000403971 TRIM49BA6NDI0 452 aa4.4□□□□□ -1.71
HMGB3P19-201ENST00000403971 SNX3O60493 162 aa4.4□□□□□ -1.71
HMGB3P19-201ENST00000403971 PRAF2O60831 178 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms