RNA–Protein interactions for RNA: ENST00000402314.6

ATG3-202, Transcript of autophagy related 3, humanhuman

TSL 1 (best) BASIC

Gene ATG3, Length 3,010 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-202ENST00000402314 VPS35Q96QK1 796 aa13.47□□□□□ -0.25
ATG3-202ENST00000402314 SIGLEC11Q96RL6 698 aa13.47□□□□□ -0.25
ATG3-202ENST00000402314 DUSP26Q9BV47 211 aa13.47□□□□□ -0.25
ATG3-202ENST00000402314 DYRK4Q9NR20 520 aa13.47□□□□□ -0.25
ATG3-202ENST00000402314 UCKL1Q9NWZ5 548 aa13.47□□□□□ -0.25
ATG3-202ENST00000402314 STMN3Q9NZ72 180 aa13.47□□□□□ -0.25
ATG3-202ENST00000402314 FZD4Q9ULV1 537 aa13.47□□□□□ -0.25
ATG3-202ENST00000402314 MPC1LP0DKB6 136 aa13.46□□□□□ -0.25
ATG3-202ENST00000402314 MAPK1P28482 360 aa13.46□□□□□ -0.25
ATG3-202ENST00000402314 MAGEA2P43356 314 aa13.46□□□□□ -0.25
ATG3-202ENST00000402314 POLR2LP62875 67 aaKnown RBP13.46□□□□□ -0.25
ATG3-202ENST00000402314 TMEM115Q12893 351 aaPredicted RBP13.46□□□□□ -0.25
ATG3-202ENST00000402314 COX20Q5RI15 118 aa13.46□□□□□ -0.25
ATG3-202ENST00000402314 TMIGD1Q6UXZ0 262 aa13.46□□□□□ -0.25
ATG3-202ENST00000402314 FAM124AQ86V42 546 aa13.46□□□□□ -0.25
ATG3-202ENST00000402314 CACUL1Q86Y37 369 aa13.46□□□□□ -0.25
ATG3-202ENST00000402314 OR5AK3PQ8NH89 298 aa13.46□□□□□ -0.25
ATG3-202ENST00000402314 TMCO6Q96DC7 493 aa13.46□□□□□ -0.25
ATG3-202ENST00000402314 SPNS1Q9H2V7 528 aa13.46□□□□□ -0.25
ATG3-202ENST00000402314 OR51B5Q9H339 312 aa13.46□□□□□ -0.25
ATG3-202ENST00000402314 CFAP20Q9Y6A4 193 aaKnown RBP13.46□□□□□ -0.25
ATG3-202ENST00000402314 HMX3A6NHT5 357 aa13.46□□□□□ -0.26
ATG3-202ENST00000402314 SLCO2B1O94956 709 aa13.46□□□□□ -0.26
ATG3-202ENST00000402314 TGFB1P01137 390 aa13.46□□□□□ -0.26
ATG3-202ENST00000402314 C9P02748 559 aa13.46□□□□□ -0.26
ATG3-202ENST00000402314 SYN1P17600 705 aa13.46□□□□□ -0.26
ATG3-202ENST00000402314 POU3F3P20264 500 aaPredicted RBP13.46□□□□□ -0.26
ATG3-202ENST00000402314 PTPN5P54829 565 aa13.46□□□□□ -0.26
ATG3-202ENST00000402314 AP1S2P56377 157 aa13.46□□□□□ -0.26
ATG3-202ENST00000402314 MTAPQ13126 283 aa13.46□□□□□ -0.26
ATG3-202ENST00000402314 HENMT1Q5T8I9 393 aaKnown RBP13.46□□□□□ -0.26
ATG3-202ENST00000402314 LIPKQ5VXJ0 399 aa13.46□□□□□ -0.26
ATG3-202ENST00000402314 METTL2BQ6P1Q9 378 aaKnown RBP13.46□□□□□ -0.26
ATG3-202ENST00000402314 RNF165Q6ZSG1 346 aa13.46□□□□□ -0.26
ATG3-202ENST00000402314 EIF3MQ7L2H7 374 aaKnown RBP13.46□□□□□ -0.26
ATG3-202ENST00000402314 METTL3Q86U44 580 aaKnown RBP13.46□□□□□ -0.26
ATG3-202ENST00000402314 CCDC28AQ8IWP9 274 aa13.46□□□□□ -0.26
ATG3-202ENST00000402314 CFAP206Q8IYR0 622 aa13.46□□□□□ -0.26
ATG3-202ENST00000402314 CHCHD4Q8N4Q1 142 aa13.46□□□□□ -0.26
ATG3-202ENST00000402314 SIMC1Q8NDZ2 872 aa13.46□□□□□ -0.26
ATG3-202ENST00000402314 OR10G2Q8NGC3 310 aa13.46□□□□□ -0.26
ATG3-202ENST00000402314 CSGALNACT1Q8TDX6 532 aa13.46□□□□□ -0.26
ATG3-202ENST00000402314 TRIM43Q96BQ3 446 aaPredicted RBP13.46□□□□□ -0.26
ATG3-202ENST00000402314 MRGPRX3Q96LB0 322 aa13.46□□□□□ -0.26
ATG3-202ENST00000402314 COL21A1Q96P44 957 aa13.46□□□□□ -0.26
ATG3-202ENST00000402314 ACAT2Q9BWD1 397 aa13.46□□□□□ -0.26
ATG3-202ENST00000402314 SORBS1Q9BX66 1292 aaKnown RBP13.46□□□□□ -0.26
ATG3-202ENST00000402314 ANKHQ9HCJ1 492 aa13.46□□□□□ -0.26
ATG3-202ENST00000402314 DNAJC27Q9NZQ0 273 aa13.46□□□□□ -0.26
ATG3-202ENST00000402314 YARS2Q9Y2Z4 477 aaKnown RBP13.46□□□□□ -0.26
ATG3-202ENST00000402314 MYO9BQ13459 2157 aa13.46□□□□□ -0.26
ATG3-202ENST00000402314 CDRT1O95170 752 aa13.45□□□□□ -0.26
ATG3-202ENST00000402314 POU6F2P78424 691 aaPredicted RBP13.45□□□□□ -0.26
ATG3-202ENST00000402314 BPHLQ86WA6 291 aaPredicted RBP13.45□□□□□ -0.26
ATG3-202ENST00000402314 NLGN4YQ8NFZ3 816 aaPredicted RBP13.45□□□□□ -0.26
ATG3-202ENST00000402314 BTN2A2Q8WVV5 523 aa13.45□□□□□ -0.26
ATG3-202ENST00000402314 CLP1Q92989 425 aaKnown RBP13.45□□□□□ -0.26
ATG3-202ENST00000402314 CIDECQ96AQ7 238 aaPredicted RBP13.45□□□□□ -0.26
ATG3-202ENST00000402314 IL17FQ96PD4 163 aa13.45□□□□□ -0.26
ATG3-202ENST00000402314 HHIPQ96QV1 700 aa13.45□□□□□ -0.26
ATG3-202ENST00000402314 NXF2Q9GZY0 626 aaKnown RBP13.45□□□□□ -0.26
ATG3-202ENST00000402314 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.45□□□□□ -0.26
ATG3-202ENST00000402314 PLAGL1Q9UM63 463 aa13.45□□□□□ -0.26
ATG3-202ENST00000402314 EXO1Q9UQ84 846 aaKnown RBP13.45□□□□□ -0.26
ATG3-202ENST00000402314 FAM25AB3EWG3 89 aa13.45□□□□□ -0.26
ATG3-202ENST00000402314 FAM25CB3EWG5 89 aa13.45□□□□□ -0.26
ATG3-202ENST00000402314 FAM25GB3EWG6 89 aa13.45□□□□□ -0.26
ATG3-202ENST00000402314 PCDH17O14917 1159 aa13.45□□□□□ -0.26
ATG3-202ENST00000402314 PLD2O14939 933 aa13.45□□□□□ -0.26
ATG3-202ENST00000402314 NPC1O15118 1278 aa13.45□□□□□ -0.26
ATG3-202ENST00000402314 CYP17A1P05093 508 aa13.45□□□□□ -0.26
ATG3-202ENST00000402314 RHOP08100 348 aa13.45□□□□□ -0.26
ATG3-202ENST00000402314 GSTM1P09488 218 aa13.45□□□□□ -0.26
ATG3-202ENST00000402314 TSPAN19P0C672 248 aa13.45□□□□□ -0.26
ATG3-202ENST00000402314 ELFN1P0C7U0 828 aa13.45□□□□□ -0.26
ATG3-202ENST00000402314 ETFAP13804 333 aa13.45□□□□□ -0.26
ATG3-202ENST00000402314 GGT2P36268 569 aa13.45□□□□□ -0.26
ATG3-202ENST00000402314 KIR2DL3P43628 341 aa13.45□□□□□ -0.26
ATG3-202ENST00000402314 PPIGQ13427 754 aaKnown RBP eCLIP13.45□□□□□ -0.26
ATG3-202ENST00000402314 EXOC3L2Q2M3D2 409 aa13.45□□□□□ -0.26
ATG3-202ENST00000402314 ZNF284Q2VY69 593 aa13.45□□□□□ -0.26
ATG3-202ENST00000402314 PDZK1Q5T2W1 519 aa13.45□□□□□ -0.26
ATG3-202ENST00000402314 CPTPQ5TA50 214 aa13.45□□□□□ -0.26
ATG3-202ENST00000402314 C12orf40Q86WS4 652 aa13.45□□□□□ -0.26
ATG3-202ENST00000402314 LGI4Q8N135 537 aa13.45□□□□□ -0.26
ATG3-202ENST00000402314 VN1R2Q8NFZ6 395 aa13.45□□□□□ -0.26
ATG3-202ENST00000402314 OR4M1Q8NGD0 313 aa13.45□□□□□ -0.26
ATG3-202ENST00000402314 OR9Q1Q8NGQ5 310 aa13.45□□□□□ -0.26
ATG3-202ENST00000402314 ENKURQ8TC29 256 aa13.45□□□□□ -0.26
ATG3-202ENST00000402314 GLYATL1Q969I3 302 aa13.45□□□□□ -0.26
ATG3-202ENST00000402314 SPATA6Q9NWH7 488 aaPredicted RBP13.45□□□□□ -0.26
ATG3-202ENST00000402314 CFL2Q9Y281 166 aa13.45□□□□□ -0.26
ATG3-202ENST00000402314 V9GYH0 126 aa13.45□□□□□ -0.26
ATG3-202ENST00000402314 ABHD14A-ACY1A0A1B0GW23 586 aa13.45□□□□□ -0.26
ATG3-202ENST00000402314 ZNF780AO75290 641 aaPredicted RBP13.45□□□□□ -0.26
ATG3-202ENST00000402314 GNRH1P01148 92 aa13.45□□□□□ -0.26
ATG3-202ENST00000402314 ADH1AP07327 375 aa13.45□□□□□ -0.26
ATG3-202ENST00000402314 CYP2A6P11509 494 aaPredicted RBP13.45□□□□□ -0.26
ATG3-202ENST00000402314 ITGA2P17301 1181 aa13.45□□□□□ -0.26
ATG3-202ENST00000402314 GPX2P18283 190 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms