RNA–Protein interactions for RNA: ENST00000400908.6

RERE-204, Transcript of arginine-glutamic acid dipeptide repeats, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RERE, Length 5,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RERE-204ENST00000400908 LAMB4A4D0S4 1761 aa13.35□□□□□ -0.27
RERE-204ENST00000400908 TRAPPC13A5PLN9 417 aa13.34□□□□□ -0.27
RERE-204ENST00000400908 LRRTM2O43300 516 aa13.34□□□□□ -0.27
RERE-204ENST00000400908 ONECUT3O60422 494 aaPredicted RBP13.34□□□□□ -0.27
RERE-204ENST00000400908 AQP2P41181 271 aa13.34□□□□□ -0.27
RERE-204ENST00000400908 ASPAP45381 313 aa13.34□□□□□ -0.27
RERE-204ENST00000400908 ACTC1P68032 377 aa13.34□□□□□ -0.27
RERE-204ENST00000400908 ACTA1P68133 377 aa13.34□□□□□ -0.27
RERE-204ENST00000400908 RGMBQ6NW40 437 aa13.34□□□□□ -0.27
RERE-204ENST00000400908 CEACAM19Q7Z692 300 aa13.34□□□□□ -0.27
RERE-204ENST00000400908 CCDC71LQ8N9Z2 235 aa13.34□□□□□ -0.27
RERE-204ENST00000400908 CMTM7Q96FZ5 175 aa13.34□□□□□ -0.27
RERE-204ENST00000400908 SDCBP2Q9H190 292 aa13.34□□□□□ -0.27
RERE-204ENST00000400908 SLA2Q9H6Q3 261 aa13.34□□□□□ -0.27
RERE-204ENST00000400908 PTGES2Q9H7Z7 377 aa13.34□□□□□ -0.27
RERE-204ENST00000400908 UTS2RQ9UKP6 389 aa13.34□□□□□ -0.27
RERE-204ENST00000400908 HCN4Q9Y3Q4 1203 aa13.34□□□□□ -0.27
RERE-204ENST00000400908 SOWAHBA6NEL2 793 aa13.34□□□□□ -0.27
RERE-204ENST00000400908 SLC7A4O43246 635 aa13.34□□□□□ -0.27
RERE-204ENST00000400908 SC5DO75845 299 aa13.34□□□□□ -0.27
RERE-204ENST00000400908 CHRM1P11229 460 aaPredicted RBP13.34□□□□□ -0.27
RERE-204ENST00000400908 PIM1P11309 404 aaPredicted RBP13.34□□□□□ -0.27
RERE-204ENST00000400908 PBX3P40426 434 aa13.34□□□□□ -0.27
RERE-204ENST00000400908 ZNF84P51523 738 aa13.34□□□□□ -0.27
RERE-204ENST00000400908 JAM2P57087 298 aa13.34□□□□□ -0.27
RERE-204ENST00000400908 TAF10Q12962 218 aa13.34□□□□□ -0.27
RERE-204ENST00000400908 NFATC4Q14934 902 aa13.34□□□□□ -0.27
RERE-204ENST00000400908 ZNF630Q2M218 657 aaPredicted RBP13.34□□□□□ -0.27
RERE-204ENST00000400908 TMEM164Q5U3C3 297 aa13.34□□□□□ -0.27
RERE-204ENST00000400908 TLDC1Q6P9B6 456 aa13.34□□□□□ -0.27
RERE-204ENST00000400908 LINGO4Q6UY18 593 aa13.34□□□□□ -0.27
RERE-204ENST00000400908 C3P1Q6ZMU1 363 aa13.34□□□□□ -0.27
RERE-204ENST00000400908 TMEM151AQ8N4L1 468 aa13.34□□□□□ -0.27
RERE-204ENST00000400908 SUMF2Q8NBJ7 301 aa13.34□□□□□ -0.27
RERE-204ENST00000400908 CAMKVQ8NCB2 501 aa13.34□□□□□ -0.27
RERE-204ENST00000400908 ALG3Q92685 438 aa13.34□□□□□ -0.27
RERE-204ENST00000400908 CDC6Q99741 560 aa13.34□□□□□ -0.27
RERE-204ENST00000400908 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.34□□□□□ -0.272e-6■□□□□ 10.8
RERE-204ENST00000400908 FAM86C1Q9NVL1 165 aa13.34□□□□□ -0.27
RERE-204ENST00000400908 WRAP73Q9P2S5 460 aaPredicted RBP13.34□□□□□ -0.27
RERE-204ENST00000400908 MATN3O15232 486 aa13.34□□□□□ -0.27
RERE-204ENST00000400908 TBX10O75333 385 aa13.34□□□□□ -0.27
RERE-204ENST00000400908 C4BPAP04003 597 aaKnown RBP13.34□□□□□ -0.27
RERE-204ENST00000400908 EVI2BP34910 448 aa13.34□□□□□ -0.27
RERE-204ENST00000400908 CAV2P51636 162 aa13.34□□□□□ -0.27
RERE-204ENST00000400908 CRYBB1P53674 252 aaPredicted RBP13.34□□□□□ -0.27
RERE-204ENST00000400908 ACTR1AP61163 376 aa13.34□□□□□ -0.27
RERE-204ENST00000400908 RPP30P78346 268 aaKnown RBP13.34□□□□□ -0.27
RERE-204ENST00000400908 JAG1P78504 1218 aa13.34□□□□□ -0.27
RERE-204ENST00000400908 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.34□□□□□ -0.27
RERE-204ENST00000400908 SMIM15Q7Z3B0 74 aa13.34□□□□□ -0.27
RERE-204ENST00000400908 ZNF681Q96N22 645 aa13.34□□□□□ -0.27
RERE-204ENST00000400908 RNF215Q9Y6U7 377 aa13.34□□□□□ -0.27
RERE-204ENST00000400908 GLTPD2A6NH11 291 aa13.34□□□□□ -0.27
RERE-204ENST00000400908 A6NLC8 198 aa13.34□□□□□ -0.27
RERE-204ENST00000400908 MRPL3P09001 348 aaKnown RBP13.34□□□□□ -0.27
RERE-204ENST00000400908 CELP19835 753 aa13.34□□□□□ -0.27
RERE-204ENST00000400908 CEACAM20Q6UY09 585 aa13.34□□□□□ -0.27
RERE-204ENST00000400908 ERMP1Q7Z2K6 904 aa13.34□□□□□ -0.27
RERE-204ENST00000400908 ZSWIM9Q86XI8 627 aa13.34□□□□□ -0.27
RERE-204ENST00000400908 PLD5Q8N7P1 536 aa13.34□□□□□ -0.27
RERE-204ENST00000400908 ZDHHC1Q8WTX9 485 aa13.34□□□□□ -0.27
RERE-204ENST00000400908 THAP4Q8WY91 577 aa13.34□□□□□ -0.27
RERE-204ENST00000400908 SHISA4Q96DD7 197 aa13.34□□□□□ -0.27
RERE-204ENST00000400908 TAS2R8Q9NYW2 309 aa13.34□□□□□ -0.27
RERE-204ENST00000400908 COL1A2P08123 1366 aa13.34□□□□□ -0.27
RERE-204ENST00000400908 TLL1O43897 1013 aa13.34□□□□□ -0.27
RERE-204ENST00000400908 ADAP00813 363 aa13.34□□□□□ -0.27
RERE-204ENST00000400908 XRCC1P18887 633 aaPredicted RBP13.34□□□□□ -0.27
RERE-204ENST00000400908 NDUFS1P28331 727 aa13.34□□□□□ -0.27
RERE-204ENST00000400908 TRAM2Q15035 370 aa13.34□□□□□ -0.27
RERE-204ENST00000400908 CCBE1Q6UXH8 406 aaPredicted RBP13.34□□□□□ -0.27
RERE-204ENST00000400908 AMZ2Q86W34 360 aa13.34□□□□□ -0.27
RERE-204ENST00000400908 MROQ9BYG7 248 aa13.34□□□□□ -0.27
RERE-204ENST00000400908 GXYLT2A0PJZ3 443 aa13.33□□□□□ -0.28
RERE-204ENST00000400908 ERI3O43414 337 aaKnown RBP13.33□□□□□ -0.28
RERE-204ENST00000400908 MT-CYBP00156 380 aaPredicted RBP13.33□□□□□ -0.28
RERE-204ENST00000400908 TGFB1P01137 390 aa13.33□□□□□ -0.28
RERE-204ENST00000400908 IMPDH1P20839 514 aa13.33□□□□□ -0.28
RERE-204ENST00000400908 CD9P21926 228 aa13.33□□□□□ -0.28
RERE-204ENST00000400908 SLC2A5P22732 501 aa13.33□□□□□ -0.28
RERE-204ENST00000400908 EDNRBP24530 442 aa13.33□□□□□ -0.28
RERE-204ENST00000400908 LURAP1Q96LR2 239 aa13.33□□□□□ -0.28
RERE-204ENST00000400908 COQ10AQ96MF6 247 aa13.33□□□□□ -0.28
RERE-204ENST00000400908 PKP2Q99959 881 aa13.33□□□□□ -0.28
RERE-204ENST00000400908 FNIP2Q9P278 1114 aa13.33□□□□□ -0.28
RERE-204ENST00000400908 CD300AQ9UGN4 299 aa13.33□□□□□ -0.28
RERE-204ENST00000400908 ALS2Q96Q42 1657 aa13.33□□□□□ -0.28
RERE-204ENST00000400908 SYNGR4O95473 234 aa13.33□□□□□ -0.28
RERE-204ENST00000400908 IRF2P14316 349 aa13.33□□□□□ -0.28
RERE-204ENST00000400908 PLGLAQ15195 96 aa13.33□□□□□ -0.28
RERE-204ENST00000400908 FAM110CQ1W6H9 321 aa13.33□□□□□ -0.28
RERE-204ENST00000400908 SLC35F1Q5T1Q4 408 aa13.33□□□□□ -0.28
RERE-204ENST00000400908 RASGRP3Q8IV61 690 aa13.33□□□□□ -0.28
RERE-204ENST00000400908 BANPQ8N9N5 519 aa13.33□□□□□ -0.28
RERE-204ENST00000400908 TRIB2Q92519 343 aa13.33□□□□□ -0.28
RERE-204ENST00000400908 DCUN1D4Q92564 292 aa13.33□□□□□ -0.28
RERE-204ENST00000400908 HAS2Q92819 552 aa13.33□□□□□ -0.28
RERE-204ENST00000400908 FBXL20Q96IG2 436 aa13.33□□□□□ -0.28
RERE-204ENST00000400908 SPIN2AQ99865 258 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms