RNA–Protein interactions for RNA: ENST00000395577.2

CDKN3-203, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 637 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-203ENST00000395577 LUMP51884 338 aaPredicted RBP4.96□□□□□ -1.62
CDKN3-203ENST00000395577 IL1RL1Q01638 556 aa4.96□□□□□ -1.62
CDKN3-203ENST00000395577 CDH18Q13634 790 aa4.96□□□□□ -1.62
CDKN3-203ENST00000395577 SMC1AQ14683 1233 aaKnown RBP4.96□□□□□ -1.62
CDKN3-203ENST00000395577 PTPN14Q15678 1187 aa4.96□□□□□ -1.62
CDKN3-203ENST00000395577 NBPF5PQ86XG9 351 aaPredicted RBP4.96□□□□□ -1.62
CDKN3-203ENST00000395577 ZC3H3Q8IXZ2 948 aaKnown RBP4.96□□□□□ -1.62
CDKN3-203ENST00000395577 TMEM99Q8N816 258 aa4.96□□□□□ -1.62
CDKN3-203ENST00000395577 TCEANCQ8N8B7 351 aa4.96□□□□□ -1.62
CDKN3-203ENST00000395577 NEDD4LQ96PU5 975 aa4.96□□□□□ -1.62
CDKN3-203ENST00000395577 NKX3-1Q99801 234 aaPredicted RBP4.96□□□□□ -1.62
CDKN3-203ENST00000395577 FAM213AQ9BRX8 229 aa4.96□□□□□ -1.62
CDKN3-203ENST00000395577 ATP13A3Q9H7F0 1226 aa4.96□□□□□ -1.62
CDKN3-203ENST00000395577 SLC52A3Q9NQ40 469 aa4.96□□□□□ -1.62
CDKN3-203ENST00000395577 RPH3AQ9Y2J0 694 aaPredicted RBP4.96□□□□□ -1.62
CDKN3-203ENST00000395577 STRAPQ9Y3F4 350 aaKnown RBP4.96□□□□□ -1.62
CDKN3-203ENST00000395577 C2CD2Q9Y426 696 aa4.96□□□□□ -1.62
CDKN3-203ENST00000395577 KDM3BQ7LBC6 1761 aa4.96□□□□□ -1.62
CDKN3-203ENST00000395577 ZNF646O15015 1829 aaPredicted RBP4.95□□□□□ -1.62
CDKN3-203ENST00000395577 RTL9Q8NET4 1388 aa4.95□□□□□ -1.62
CDKN3-203ENST00000395577 TRBV2A0A0J9YWF9 115 aa4.95□□□□□ -1.62
CDKN3-203ENST00000395577 ERVV-1B6SEH8 477 aa4.95□□□□□ -1.62
CDKN3-203ENST00000395577 PSMD3O43242 534 aa4.95□□□□□ -1.62
CDKN3-203ENST00000395577 HSF2BPO75031 334 aa4.95□□□□□ -1.62
CDKN3-203ENST00000395577 CLN5O75503 358 aa4.95□□□□□ -1.62
CDKN3-203ENST00000395577 REC8O95072 547 aa4.95□□□□□ -1.62
CDKN3-203ENST00000395577 SEC24AO95486 1093 aa4.95□□□□□ -1.62
CDKN3-203ENST00000395577 PCP11498 1178 aaKnown RBP4.95□□□□□ -1.62
CDKN3-203ENST00000395577 RPL35AP18077 110 aaKnown RBP4.95□□□□□ -1.62
CDKN3-203ENST00000395577 MAPK3P27361 379 aaPredicted RBP4.95□□□□□ -1.62
CDKN3-203ENST00000395577 CLK1P49759 484 aaKnown RBP4.95□□□□□ -1.62
CDKN3-203ENST00000395577 CLCN4P51793 760 aa4.95□□□□□ -1.62
CDKN3-203ENST00000395577 DCDC1P59894 354 aa4.95□□□□□ -1.62
CDKN3-203ENST00000395577 PDK1Q15118 436 aa4.95□□□□□ -1.62
CDKN3-203ENST00000395577 B3GLCTQ6Y288 498 aa4.95□□□□□ -1.62
CDKN3-203ENST00000395577 LEKR1Q6ZMV7 388 aa4.95□□□□□ -1.62
CDKN3-203ENST00000395577 MACC1Q6ZN28 852 aa4.95□□□□□ -1.62
CDKN3-203ENST00000395577 C15orf52Q6ZUT6 534 aaKnown RBP4.95□□□□□ -1.62
CDKN3-203ENST00000395577 MIER3Q7Z3K6 550 aa4.95□□□□□ -1.62
CDKN3-203ENST00000395577 TMEM178AQ8NBL3 297 aa4.95□□□□□ -1.62
CDKN3-203ENST00000395577 RNF149Q8NC42 400 aa4.95□□□□□ -1.62
CDKN3-203ENST00000395577 SLC13A3Q8WWT9 602 aa4.95□□□□□ -1.62
CDKN3-203ENST00000395577 DTD2Q96FN9 168 aa4.95□□□□□ -1.62
CDKN3-203ENST00000395577 NECTIN4Q96NY8 510 aa4.95□□□□□ -1.62
CDKN3-203ENST00000395577 UHRF2Q96PU4 802 aa4.95□□□□□ -1.62
CDKN3-203ENST00000395577 FSD1Q9BTV5 496 aa4.95□□□□□ -1.62
CDKN3-203ENST00000395577 LRRC2Q9BYS8 371 aa4.95□□□□□ -1.62
CDKN3-203ENST00000395577 NYXQ9GZU5 481 aa4.95□□□□□ -1.62
CDKN3-203ENST00000395577 VPS33BQ9H267 617 aa4.95□□□□□ -1.62
CDKN3-203ENST00000395577 ZDHHC6Q9H6R6 413 aa4.95□□□□□ -1.62
CDKN3-203ENST00000395577 SYTL2Q9HCH5 934 aa4.95□□□□□ -1.62
CDKN3-203ENST00000395577 MIS18AQ9NYP9 233 aa4.95□□□□□ -1.62
CDKN3-203ENST00000395577 EPHA6Q9UF33 1036 aa4.95□□□□□ -1.62
CDKN3-203ENST00000395577 SATB2Q9UPW6 733 aa4.95□□□□□ -1.62
CDKN3-203ENST00000395577 NIP7Q9Y221 180 aaKnown RBP eCLIP4.95□□□□□ -1.62
CDKN3-203ENST00000395577 ATP6V0A2Q9Y487 856 aa4.95□□□□□ -1.62
CDKN3-203ENST00000395577 NUP98P52948 1817 aa4.95□□□□□ -1.62
CDKN3-203ENST00000395577 MAP3K15Q6ZN16 1313 aa4.95□□□□□ -1.62
CDKN3-203ENST00000395577 SCN9AQ15858 1988 aa4.95□□□□□ -1.62
CDKN3-203ENST00000395577 RNF103-CHMP3A0A140T963 221 aa4.94□□□□□ -1.62
CDKN3-203ENST00000395577 MSGN1A6NI15 193 aa4.94□□□□□ -1.62
CDKN3-203ENST00000395577 SLC15A5A6NIM6 579 aa4.94□□□□□ -1.62
CDKN3-203ENST00000395577 PMS2P5A8MQ11 134 aa4.94□□□□□ -1.62
CDKN3-203ENST00000395577 ZNF732B4DXR9 585 aa4.94□□□□□ -1.62
CDKN3-203ENST00000395577 C19orf81C9J6K1 198 aa4.94□□□□□ -1.62
CDKN3-203ENST00000395577 TLR4O00206 839 aa4.94□□□□□ -1.62
CDKN3-203ENST00000395577 RNF103O00237 685 aa4.94□□□□□ -1.62
CDKN3-203ENST00000395577 MLNRO43193 412 aa4.94□□□□□ -1.62
CDKN3-203ENST00000395577 KCNAB3O43448 404 aa4.94□□□□□ -1.62
CDKN3-203ENST00000395577 CYTIPO60759 359 aa4.94□□□□□ -1.62
CDKN3-203ENST00000395577 SAP30O75446 220 aa4.94□□□□□ -1.62
CDKN3-203ENST00000395577 EML2O95834 649 aa4.94□□□□□ -1.62
CDKN3-203ENST00000395577 PAK4O96013 591 aaPredicted RBP4.94□□□□□ -1.62
CDKN3-203ENST00000395577 IGLV2-11P01706 119 aa4.94□□□□□ -1.62
CDKN3-203ENST00000395577 SLC4A1P02730 911 aa4.94□□□□□ -1.62
CDKN3-203ENST00000395577 ALPPP05187 535 aa4.94□□□□□ -1.62
CDKN3-203ENST00000395577 CD48P09326 243 aa4.94□□□□□ -1.62
CDKN3-203ENST00000395577 NUDT17P0C025 328 aa4.94□□□□□ -1.62
CDKN3-203ENST00000395577 ALPPL2P10696 532 aa4.94□□□□□ -1.62
CDKN3-203ENST00000395577 AHCYP23526 432 aa4.94□□□□□ -1.62
CDKN3-203ENST00000395577 SLC1A3P43003 542 aa4.94□□□□□ -1.62
CDKN3-203ENST00000395577 HUNKP57058 714 aa4.94□□□□□ -1.62
CDKN3-203ENST00000395577 OR1D5P58170 312 aa4.94□□□□□ -1.62
CDKN3-203ENST00000395577 SP3Q02447 781 aa4.94□□□□□ -1.62
CDKN3-203ENST00000395577 ITGA9Q13797 1035 aa4.94□□□□□ -1.62
CDKN3-203ENST00000395577 GK2Q14410 553 aaPredicted RBP4.94□□□□□ -1.62
CDKN3-203ENST00000395577 TMEM132DQ14C87 1099 aa4.94□□□□□ -1.62
CDKN3-203ENST00000395577 SLC27A4Q6P1M0 643 aa4.94□□□□□ -1.62
CDKN3-203ENST00000395577 SLC25A47Q6Q0C1 308 aa4.94□□□□□ -1.62
CDKN3-203ENST00000395577 CD164L2Q6UWJ8 174 aa4.94□□□□□ -1.62
CDKN3-203ENST00000395577 BTN2A1Q7KYR7 527 aa4.94□□□□□ -1.62
CDKN3-203ENST00000395577 TRMT11Q7Z4G4 463 aaKnown RBP4.94□□□□□ -1.62
CDKN3-203ENST00000395577 ZNF444Q8N0Y2 327 aaPredicted RBP4.94□□□□□ -1.62
CDKN3-203ENST00000395577 FBXW8Q8N3Y1 598 aa4.94□□□□□ -1.62
CDKN3-203ENST00000395577 EXOC6Q8TAG9 804 aa4.94□□□□□ -1.62
CDKN3-203ENST00000395577 PRCCQ92733 491 aaPredicted RBP4.94□□□□□ -1.62
CDKN3-203ENST00000395577 HAS2Q92819 552 aa4.94□□□□□ -1.62
CDKN3-203ENST00000395577 UBAC1Q9BSL1 405 aa4.94□□□□□ -1.62
CDKN3-203ENST00000395577 WWTR1Q9GZV5 400 aa4.94□□□□□ -1.62
CDKN3-203ENST00000395577 MTIF3Q9H2K0 278 aaKnown RBP4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms