RNA–Protein interactions for RNA: ENST00000394820.8

NFKB1-202, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-202ENST00000394820 FKBP10Q96AY3 582 aa12.65□□□□□ -0.38
NFKB1-202ENST00000394820 AP2M1Q96CW1 435 aa12.65□□□□□ -0.38
NFKB1-202ENST00000394820 TMEM175Q9BSA9 504 aa12.65□□□□□ -0.38
NFKB1-202ENST00000394820 SLC22A4Q9H015 551 aa12.65□□□□□ -0.38
NFKB1-202ENST00000394820 OR2AG1Q9H205 316 aa12.65□□□□□ -0.38
NFKB1-202ENST00000394820 NANSQ9NR45 359 aa12.65□□□□□ -0.38
NFKB1-202ENST00000394820 MRPL39Q9NYK5 338 aaKnown RBP12.65□□□□□ -0.38
NFKB1-202ENST00000394820 MKLN1Q9UL63 735 aa12.65□□□□□ -0.38
NFKB1-202ENST00000394820 OARD1Q9Y530 152 aa12.65□□□□□ -0.38
NFKB1-202ENST00000394820 ATG2BQ96BY7 2078 aa12.65□□□□□ -0.38
NFKB1-202ENST00000394820 F11P03951 625 aa12.65□□□□□ -0.39
NFKB1-202ENST00000394820 YES1P07947 543 aa12.65□□□□□ -0.39
NFKB1-202ENST00000394820 PRKAR1AP10644 381 aa12.65□□□□□ -0.39
NFKB1-202ENST00000394820 JUNBP17275 347 aaPredicted RBP12.65□□□□□ -0.39
NFKB1-202ENST00000394820 ZNF791Q3KP31 576 aaPredicted RBP12.65□□□□□ -0.39
NFKB1-202ENST00000394820 LCN1P1Q5VSP4 162 aa12.65□□□□□ -0.39
NFKB1-202ENST00000394820 MZT2BQ6NZ67 158 aa12.65□□□□□ -0.39
NFKB1-202ENST00000394820 MINDY2Q8NBR6 621 aa12.65□□□□□ -0.39
NFKB1-202ENST00000394820 RAD51AP1Q96B01 352 aa12.65□□□□□ -0.39
NFKB1-202ENST00000394820 DUS3LQ96G46 650 aaKnown RBP12.65□□□□□ -0.39
NFKB1-202ENST00000394820 SLIRPQ9GZT3 109 aaKnown RBP12.65□□□□□ -0.39
NFKB1-202ENST00000394820 B3GNT3Q9Y2A9 372 aa12.65□□□□□ -0.39
NFKB1-202ENST00000394820 AP3M1Q9Y2T2 418 aa12.65□□□□□ -0.39
NFKB1-202ENST00000394820 HCN4Q9Y3Q4 1203 aa12.65□□□□□ -0.39
NFKB1-202ENST00000394820 CHURC1-FNTBB4DL54 471 aa12.64□□□□□ -0.39
NFKB1-202ENST00000394820 M0R3H8 397 aa12.64□□□□□ -0.39
NFKB1-202ENST00000394820 GMFGO60234 142 aa12.64□□□□□ -0.39
NFKB1-202ENST00000394820 CYP17A1P05093 508 aa12.64□□□□□ -0.39
NFKB1-202ENST00000394820 RYKP34925 604 aa12.64□□□□□ -0.39
NFKB1-202ENST00000394820 MAN2A2P49641 1150 aa12.64□□□□□ -0.39
NFKB1-202ENST00000394820 MAPK12P53778 367 aa12.64□□□□□ -0.39
NFKB1-202ENST00000394820 ST8SIA6P61647 398 aa12.64□□□□□ -0.39
NFKB1-202ENST00000394820 NTHL1P78549 312 aa12.64□□□□□ -0.39
NFKB1-202ENST00000394820 GINS1Q14691 196 aa12.64□□□□□ -0.39
NFKB1-202ENST00000394820 LRRC17Q8N6Y2 441 aa12.64□□□□□ -0.39
NFKB1-202ENST00000394820 ZNF557Q8N988 423 aaPredicted RBP12.64□□□□□ -0.39
NFKB1-202ENST00000394820 SLAIN1Q8ND83 568 aa12.64□□□□□ -0.39
NFKB1-202ENST00000394820 FCGR1BQ92637 280 aa12.64□□□□□ -0.39
NFKB1-202ENST00000394820 TADA1Q96BN2 335 aa12.64□□□□□ -0.39
NFKB1-202ENST00000394820 LRR1Q96L50 414 aa12.64□□□□□ -0.39
NFKB1-202ENST00000394820 TEX12Q9BXU0 123 aa12.64□□□□□ -0.39
NFKB1-202ENST00000394820 CDCP1Q9H5V8 836 aa12.64□□□□□ -0.39
NFKB1-202ENST00000394820 FBXW2Q9UKT8 454 aa12.64□□□□□ -0.39
NFKB1-202ENST00000394820 POFUT2Q9Y2G5 429 aa12.64□□□□□ -0.39
NFKB1-202ENST00000394820 SLC30A4O14863 429 aa12.64□□□□□ -0.39
NFKB1-202ENST00000394820 OR2B3O76000 313 aa12.64□□□□□ -0.39
NFKB1-202ENST00000394820 RPS19P39019 145 aaKnown RBP12.64□□□□□ -0.39
NFKB1-202ENST00000394820 SUOXP51687 545 aa12.64□□□□□ -0.39
NFKB1-202ENST00000394820 TAS2R41P59536 307 aa12.64□□□□□ -0.39
NFKB1-202ENST00000394820 DCDC1P59894 354 aa12.64□□□□□ -0.39
NFKB1-202ENST00000394820 AP1S1P61966 158 aa12.64□□□□□ -0.39
NFKB1-202ENST00000394820 HBA1P69905 142 aa12.64□□□□□ -0.39
NFKB1-202ENST00000394820 KCNC4Q03721 635 aa12.64□□□□□ -0.39
NFKB1-202ENST00000394820 HEPACAMQ14CZ8 416 aa12.64□□□□□ -0.39
NFKB1-202ENST00000394820 ANXA8L1Q5VT79 327 aa12.64□□□□□ -0.39
NFKB1-202ENST00000394820 MED27Q6P2C8 311 aa12.64□□□□□ -0.39
NFKB1-202ENST00000394820 ZNF730Q6ZMV8 503 aa12.64□□□□□ -0.39
NFKB1-202ENST00000394820 RBM45Q8IUH3 476 aaKnown RBP12.64□□□□□ -0.39
NFKB1-202ENST00000394820 IZUMO1Q8IYV9 350 aa12.64□□□□□ -0.39
NFKB1-202ENST00000394820 Q8N402 240 aa12.64□□□□□ -0.39
NFKB1-202ENST00000394820 OR2AP1Q8NGE2 309 aa12.64□□□□□ -0.39
NFKB1-202ENST00000394820 ADAMTS16Q8TE57 1224 aa12.64□□□□□ -0.39
NFKB1-202ENST00000394820 PEX13Q92968 403 aa12.64□□□□□ -0.39
NFKB1-202ENST00000394820 ANKRA2Q9H9E1 313 aa12.64□□□□□ -0.39
NFKB1-202ENST00000394820 QPCTLQ9NXS2 382 aa12.64□□□□□ -0.39
NFKB1-202ENST00000394820 MBD1Q9UIS9 605 aaPredicted RBP12.64□□□□□ -0.39
NFKB1-202ENST00000394820 ITM2BQ9Y287 266 aa12.64□□□□□ -0.39
NFKB1-202ENST00000394820 PCDHGA6Q9Y5G7 932 aa12.64□□□□□ -0.39
NFKB1-202ENST00000394820 FAM172BPA6NC97 362 aa12.64□□□□□ -0.39
NFKB1-202ENST00000394820 PCDH8O95206 1070 aa12.64□□□□□ -0.39
NFKB1-202ENST00000394820 ELFN1P0C7U0 828 aa12.64□□□□□ -0.39
NFKB1-202ENST00000394820 CD72P21854 359 aa12.64□□□□□ -0.39
NFKB1-202ENST00000394820 SSTR2P30874 369 aa12.64□□□□□ -0.39
NFKB1-202ENST00000394820 LRRC32Q14392 662 aa12.64□□□□□ -0.39
NFKB1-202ENST00000394820 RGNQ15493 299 aa12.64□□□□□ -0.39
NFKB1-202ENST00000394820 PNCKQ6P2M8 343 aa12.64□□□□□ -0.39
NFKB1-202ENST00000394820 ARL9Q6T311 187 aa12.64□□□□□ -0.39
NFKB1-202ENST00000394820 MFSD4AQ8N468 514 aa12.64□□□□□ -0.39
NFKB1-202ENST00000394820 DCAF4L2Q8NA75 395 aa12.64□□□□□ -0.39
NFKB1-202ENST00000394820 TCEAL4Q96EI5 215 aa12.64□□□□□ -0.39
NFKB1-202ENST00000394820 CMTM7Q96FZ5 175 aa12.64□□□□□ -0.39
NFKB1-202ENST00000394820 MSANTD3Q96H12 275 aa12.64□□□□□ -0.39
NFKB1-202ENST00000394820 CDADC1Q9BWV3 514 aa12.64□□□□□ -0.39
NFKB1-202ENST00000394820 ZCCHC3Q9NUD5 404 aaKnown RBP12.64□□□□□ -0.39
NFKB1-202ENST00000394820 TMEM184CQ9NVA4 438 aa12.64□□□□□ -0.39
NFKB1-202ENST00000394820 PCDHB11Q9Y5F2 797 aa12.64□□□□□ -0.39
NFKB1-202ENST00000394820 LOC105369274A0A096LPK9 316 aa12.63□□□□□ -0.39
NFKB1-202ENST00000394820 METTL15A6NJ78 407 aa12.63□□□□□ -0.39
NFKB1-202ENST00000394820 PLD2O14939 933 aa12.63□□□□□ -0.39
NFKB1-202ENST00000394820 KMOO15229 486 aa12.63□□□□□ -0.39
NFKB1-202ENST00000394820 AKR7A2O43488 359 aa12.63□□□□□ -0.39
NFKB1-202ENST00000394820 TGM5O43548 720 aa12.63□□□□□ -0.39
NFKB1-202ENST00000394820 LATO43561 262 aa12.63□□□□□ -0.39
NFKB1-202ENST00000394820 MRPL3P09001 348 aaKnown RBP12.63□□□□□ -0.39
NFKB1-202ENST00000394820 INHBBP09529 407 aa12.63□□□□□ -0.39
NFKB1-202ENST00000394820 ACRV1P26436 265 aa12.63□□□□□ -0.39
NFKB1-202ENST00000394820 C9orf64Q5T6V5 341 aa12.63□□□□□ -0.39
NFKB1-202ENST00000394820 CRTC1Q6UUV9 634 aa12.63□□□□□ -0.39
NFKB1-202ENST00000394820 OR4N4Q8N0Y3 316 aa12.63□□□□□ -0.39
NFKB1-202ENST00000394820 ZNF300Q96RE9 604 aaPredicted RBP12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms