RNA–Protein interactions for RNA: ENST00000394082.8

SNRPA1-202, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-202ENST00000394082 ACOT4Q8N9L9 421 aa16.19■□□□□ 0.18
SNRPA1-202ENST00000394082 OR5M3Q8NGP4 307 aa16.19■□□□□ 0.18
SNRPA1-202ENST00000394082 SLC2A12Q8TD20 617 aa16.19■□□□□ 0.18
SNRPA1-202ENST00000394082 ZNF473Q8WTR7 871 aaKnown RBP16.19■□□□□ 0.18
SNRPA1-202ENST00000394082 F2RL3Q96RI0 385 aa16.19■□□□□ 0.18
SNRPA1-202ENST00000394082 SMC6Q96SB8 1091 aa16.19■□□□□ 0.18
SNRPA1-202ENST00000394082 OR8D2Q9GZM6 311 aa16.19■□□□□ 0.18
SNRPA1-202ENST00000394082 LIN28AQ9H9Z2 209 aaKnown RBP16.19■□□□□ 0.18
SNRPA1-202ENST00000394082 SMYD2Q9NRG4 433 aa16.19■□□□□ 0.18
SNRPA1-202ENST00000394082 MS4A12Q9NXJ0 267 aa16.19■□□□□ 0.18
SNRPA1-202ENST00000394082 TXNDC16Q9P2K2 825 aa16.19■□□□□ 0.18
SNRPA1-202ENST00000394082 COPS7AQ9UBW8 275 aa16.19■□□□□ 0.18
SNRPA1-202ENST00000394082 PCDHGB3Q9Y5G1 929 aa16.19■□□□□ 0.18
SNRPA1-202ENST00000394082 MED13LQ71F56 2210 aa16.19■□□□□ 0.18
SNRPA1-202ENST00000394082 SETD2Q9BYW2 2564 aaPredicted RBP16.19■□□□□ 0.18
SNRPA1-202ENST00000394082 FAM47E-STBD1D6RA91 191 aa16.18■□□□□ 0.18
SNRPA1-202ENST00000394082 NPIPA2E9PIF3 369 aa16.18■□□□□ 0.18
SNRPA1-202ENST00000394082 NPIPA3F8WFD2 350 aa16.18■□□□□ 0.18
SNRPA1-202ENST00000394082 WDR1O75083 606 aa16.18■□□□□ 0.18
SNRPA1-202ENST00000394082 COX7A2P14406 83 aa16.18■□□□□ 0.18
SNRPA1-202ENST00000394082 CD1EP15812 388 aa16.18■□□□□ 0.18
SNRPA1-202ENST00000394082 HIST1H1TP22492 207 aaPredicted RBP16.18■□□□□ 0.18
SNRPA1-202ENST00000394082 ARFIP1P53367 373 aa16.18■□□□□ 0.18
SNRPA1-202ENST00000394082 IRF8Q02556 426 aa16.18■□□□□ 0.18
SNRPA1-202ENST00000394082 OR4D1Q15615 310 aa16.18■□□□□ 0.18
SNRPA1-202ENST00000394082 PIGGQ5H8A4 983 aa16.18■□□□□ 0.18
SNRPA1-202ENST00000394082 CES4AQ5XG92 561 aa16.18■□□□□ 0.18
SNRPA1-202ENST00000394082 ADNP2Q6IQ32 1131 aa16.18■□□□□ 0.18
SNRPA1-202ENST00000394082 ZNF793Q6ZN11 406 aa16.18■□□□□ 0.18
SNRPA1-202ENST00000394082 CHSY3Q70JA7 882 aa16.18■□□□□ 0.18
SNRPA1-202ENST00000394082 RPRMLQ8N4K4 120 aa16.18■□□□□ 0.18
SNRPA1-202ENST00000394082 SLC15A4Q8N697 577 aa16.18■□□□□ 0.18
SNRPA1-202ENST00000394082 TMEM251Q8N6I4 163 aa16.18■□□□□ 0.18
SNRPA1-202ENST00000394082 SNX31Q8N9S9 440 aa16.18■□□□□ 0.18
SNRPA1-202ENST00000394082 MYRIPQ8NFW9 859 aa16.18■□□□□ 0.18
SNRPA1-202ENST00000394082 ZNF721Q8TF20 911 aa16.18■□□□□ 0.18
SNRPA1-202ENST00000394082 PYROXD1Q8WU10 500 aa16.18■□□□□ 0.18
SNRPA1-202ENST00000394082 ANKRD9Q96BM1 317 aaPredicted RBP16.18■□□□□ 0.18
SNRPA1-202ENST00000394082 RBBP8Q99708 897 aa16.18■□□□□ 0.18
SNRPA1-202ENST00000394082 TTYH2Q9BSA4 534 aa16.18■□□□□ 0.18
SNRPA1-202ENST00000394082 CD244Q9BZW8 370 aa16.18■□□□□ 0.18
SNRPA1-202ENST00000394082 UCK2Q9BZX2 261 aa16.18■□□□□ 0.18
SNRPA1-202ENST00000394082 SH2D2AQ9NP31 389 aa16.18■□□□□ 0.18
SNRPA1-202ENST00000394082 PNPLA3Q9NST1 481 aa16.18■□□□□ 0.18
SNRPA1-202ENST00000394082 CD274Q9NZQ7 290 aa16.18■□□□□ 0.18
SNRPA1-202ENST00000394082 ADGRE2Q9UHX3 823 aa16.18■□□□□ 0.18
SNRPA1-202ENST00000394082 SAR1BQ9Y6B6 198 aa16.18■□□□□ 0.18
SNRPA1-202ENST00000394082 INTS1Q8N201 2190 aaKnown RBP16.18■□□□□ 0.18
SNRPA1-202ENST00000394082 NF1P21359 2839 aa16.18■□□□□ 0.18
SNRPA1-202ENST00000394082 A0A0G2JMM0 328 aa16.17■□□□□ 0.18
SNRPA1-202ENST00000394082 A0A1W2PPB8 328 aa16.17■□□□□ 0.18
SNRPA1-202ENST00000394082 A0A1W2PRS3 328 aa16.17■□□□□ 0.18
SNRPA1-202ENST00000394082 NKX2-6A6NCS4 301 aa16.17■□□□□ 0.18
SNRPA1-202ENST00000394082 FAM90A27PA6NNH2 459 aa16.17■□□□□ 0.18
SNRPA1-202ENST00000394082 FAM166BA8MTA8 275 aa16.17■□□□□ 0.18
SNRPA1-202ENST00000394082 KIR3DP1A8MWS1 328 aa16.17■□□□□ 0.18
SNRPA1-202ENST00000394082 KLK8O60259 260 aa16.17■□□□□ 0.18
SNRPA1-202ENST00000394082 HCN1O60741 890 aa16.17■□□□□ 0.18
SNRPA1-202ENST00000394082 LDB3O75112 727 aa16.17■□□□□ 0.18
SNRPA1-202ENST00000394082 IGKV3-11P04433 115 aa16.17■□□□□ 0.18
SNRPA1-202ENST00000394082 P04436 131 aa16.17■□□□□ 0.18
SNRPA1-202ENST00000394082 GSTA2P09210 222 aa16.17■□□□□ 0.18
SNRPA1-202ENST00000394082 TNNI3P19429 210 aa16.17■□□□□ 0.18
SNRPA1-202ENST00000394082 GP5P40197 560 aa16.17■□□□□ 0.18
SNRPA1-202ENST00000394082 RPL21P46778 160 aaKnown RBP16.17■□□□□ 0.18
SNRPA1-202ENST00000394082 STT3AP46977 705 aa16.17■□□□□ 0.18
SNRPA1-202ENST00000394082 NR0B1P51843 470 aaKnown RBP16.17■□□□□ 0.18
SNRPA1-202ENST00000394082 RAB10P61026 200 aa16.17■□□□□ 0.18
SNRPA1-202ENST00000394082 CHIT1Q13231 466 aa16.17■□□□□ 0.18
SNRPA1-202ENST00000394082 SLC10A1Q14973 349 aa16.17■□□□□ 0.18
SNRPA1-202ENST00000394082 AP5B1Q2VPB7 878 aa16.17■□□□□ 0.18
SNRPA1-202ENST00000394082 ZNF750Q32MQ0 723 aa16.17■□□□□ 0.18
SNRPA1-202ENST00000394082 ZNF791Q3KP31 576 aaPredicted RBP16.17■□□□□ 0.18
SNRPA1-202ENST00000394082 B3GNT6Q6ZMB0 384 aa16.17■□□□□ 0.18
SNRPA1-202ENST00000394082 FAM47EQ6ZV65 393 aa16.17■□□□□ 0.18
SNRPA1-202ENST00000394082 CCDC71Q8IV32 467 aaPredicted RBP16.17■□□□□ 0.18
SNRPA1-202ENST00000394082 SPATA6LQ8N4H0 392 aa16.17■□□□□ 0.18
SNRPA1-202ENST00000394082 ZNF321PQ8N8H1 164 aa16.17■□□□□ 0.18
SNRPA1-202ENST00000394082 STAG3L4Q8TBR4 150 aa16.17■□□□□ 0.18
SNRPA1-202ENST00000394082 ESAMQ96AP7 390 aa16.17■□□□□ 0.18
SNRPA1-202ENST00000394082 SARAFQ96BY9 339 aa16.17■□□□□ 0.18
SNRPA1-202ENST00000394082 CMTM7Q96FZ5 175 aa16.17■□□□□ 0.18
SNRPA1-202ENST00000394082 ART5Q96L15 291 aa16.17■□□□□ 0.18
SNRPA1-202ENST00000394082 MAPKAP1Q9BPZ7 522 aa16.17■□□□□ 0.18
SNRPA1-202ENST00000394082 ZNF559Q9BR84 538 aa16.17■□□□□ 0.18
SNRPA1-202ENST00000394082 CAB39LQ9H9S4 337 aa16.17■□□□□ 0.18
SNRPA1-202ENST00000394082 GRPEL1Q9HAV7 217 aa16.17■□□□□ 0.18
SNRPA1-202ENST00000394082 TRMT1Q9NXH9 659 aaKnown RBP16.17■□□□□ 0.18
SNRPA1-202ENST00000394082 TSC22D4Q9Y3Q8 395 aa16.17■□□□□ 0.18
SNRPA1-202ENST00000394082 ATG4BQ9Y4P1 393 aa16.17■□□□□ 0.18
SNRPA1-202ENST00000394082 CCDC189A1A4V9 331 aa16.16■□□□□ 0.18
SNRPA1-202ENST00000394082 FAM159BA6NKW6 160 aa16.16■□□□□ 0.18
SNRPA1-202ENST00000394082 PHGDHO43175 533 aaKnown RBP16.16■□□□□ 0.18
SNRPA1-202ENST00000394082 DYRK3O43781 588 aa16.16■□□□□ 0.18
SNRPA1-202ENST00000394082 ZNF354AO60765 605 aaPredicted RBP16.16■□□□□ 0.18
SNRPA1-202ENST00000394082 ETHE1O95571 254 aa16.16■□□□□ 0.18
SNRPA1-202ENST00000394082 S100BP04271 92 aaPredicted RBP16.16■□□□□ 0.18
SNRPA1-202ENST00000394082 GABRA1P14867 456 aa16.16■□□□□ 0.18
SNRPA1-202ENST00000394082 PAFAH1B1P43034 410 aa16.16■□□□□ 0.18
SNRPA1-202ENST00000394082 MSH2P43246 934 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms