RNA–Protein interactions for RNA: ENST00000394013.6

RNF41-202, Transcript of ring finger protein 41, humanhuman

TSL 1 (best) BASIC

Gene RNF41, Length 2,452 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41-202ENST00000394013 HCRTR1O43613 425 aa13.56□□□□□ -0.24
RNF41-202ENST00000394013 C7P10643 843 aa13.56□□□□□ -0.24
RNF41-202ENST00000394013 HTR1BP28222 390 aa13.56□□□□□ -0.24
RNF41-202ENST00000394013 ALDH3B2P48448 385 aa13.56□□□□□ -0.24
RNF41-202ENST00000394013 CLK3P49761 638 aaKnown RBP13.56□□□□□ -0.24
RNF41-202ENST00000394013 PMS2P3Q13401 168 aa13.56□□□□□ -0.24
RNF41-202ENST00000394013 HEPACAMQ14CZ8 416 aa13.56□□□□□ -0.24
RNF41-202ENST00000394013 SPDYE7PQ495Y7 208 aa13.56□□□□□ -0.24
RNF41-202ENST00000394013 TJAP1Q5JTD0 557 aa13.56□□□□□ -0.24
RNF41-202ENST00000394013 ZNF425Q6IV72 752 aa13.56□□□□□ -0.24
RNF41-202ENST00000394013 PAGE2Q7Z2X7 111 aa13.56□□□□□ -0.24
RNF41-202ENST00000394013 C6orf120Q7Z4R8 191 aa13.56□□□□□ -0.24
RNF41-202ENST00000394013 CCDC116Q8IYX3 515 aa13.56□□□□□ -0.24
RNF41-202ENST00000394013 OR4N4Q8N0Y3 316 aa13.56□□□□□ -0.24
RNF41-202ENST00000394013 SLC38A5Q8WUX1 472 aa13.56□□□□□ -0.24
RNF41-202ENST00000394013 NLNQ9BYT8 704 aa13.56□□□□□ -0.24
RNF41-202ENST00000394013 ING2Q9H160 280 aa13.56□□□□□ -0.24
RNF41-202ENST00000394013 RUBCNLQ9H714 662 aa13.56□□□□□ -0.24
RNF41-202ENST00000394013 USE1Q9NZ43 259 aa13.56□□□□□ -0.24
RNF41-202ENST00000394013 SCML1Q9UN30 329 aa13.56□□□□□ -0.24
RNF41-202ENST00000394013 MRPS2Q9Y399 296 aaKnown RBP13.56□□□□□ -0.24
RNF41-202ENST00000394013 ASB4Q9Y574 426 aa13.56□□□□□ -0.24
RNF41-202ENST00000394013 CFAP54Q96N23 3096 aa13.56□□□□□ -0.24
RNF41-202ENST00000394013 LRRC72A6NJI9 287 aa13.55□□□□□ -0.24
RNF41-202ENST00000394013 H0YAE9 185 aa13.55□□□□□ -0.24
RNF41-202ENST00000394013 XPNPEP2O43895 674 aa13.55□□□□□ -0.24
RNF41-202ENST00000394013 AIFM1O95831 613 aa13.55□□□□□ -0.24
RNF41-202ENST00000394013 ATXN8OSP0DMR3 200 aa13.55□□□□□ -0.24
RNF41-202ENST00000394013 HIST1H1TP22492 207 aaPredicted RBP13.55□□□□□ -0.24
RNF41-202ENST00000394013 UQCRC2P22695 453 aa13.55□□□□□ -0.24
RNF41-202ENST00000394013 EEF1B2P24534 225 aaKnown RBP13.55□□□□□ -0.24
RNF41-202ENST00000394013 ATP5A1P25705 553 aaKnown RBP13.55□□□□□ -0.24
RNF41-202ENST00000394013 DSTNP60981 165 aa13.55□□□□□ -0.24
RNF41-202ENST00000394013 SMN1Q16637 294 aaKnown RBP13.55□□□□□ -0.24
RNF41-202ENST00000394013 FBXO42Q6P3S6 717 aa13.55□□□□□ -0.24
RNF41-202ENST00000394013 PRSS41Q7RTY9 318 aa13.55□□□□□ -0.24
RNF41-202ENST00000394013 RBM45Q8IUH3 476 aaKnown RBP13.55□□□□□ -0.24
RNF41-202ENST00000394013 CHDHQ8NE62 594 aaPredicted RBP13.55□□□□□ -0.24
RNF41-202ENST00000394013 MTERF3Q96E29 417 aa13.55□□□□□ -0.24
RNF41-202ENST00000394013 CNRIP1Q96F85 164 aaPredicted RBP13.55□□□□□ -0.24
RNF41-202ENST00000394013 MAPKAP1Q9BPZ7 522 aa13.55□□□□□ -0.24
RNF41-202ENST00000394013 NAA50Q9GZZ1 169 aaKnown RBP13.55□□□□□ -0.24
RNF41-202ENST00000394013 NT5DC2Q9H857 520 aa13.55□□□□□ -0.24
RNF41-202ENST00000394013 FBRSQ9HAH7 460 aa13.55□□□□□ -0.24
RNF41-202ENST00000394013 HPRP00739 348 aa13.55□□□□□ -0.24
RNF41-202ENST00000394013 F3P13726 295 aa13.55□□□□□ -0.24
RNF41-202ENST00000394013 PPIBP23284 216 aaKnown RBP13.55□□□□□ -0.24
RNF41-202ENST00000394013 MAOBP27338 520 aa13.55□□□□□ -0.24
RNF41-202ENST00000394013 NCBP2P52298 156 aaKnown RBP eCLIP13.55□□□□□ -0.24
RNF41-202ENST00000394013 TPD52P55327 224 aaPredicted RBP13.55□□□□□ -0.24
RNF41-202ENST00000394013 BTN3A2P78410 334 aa13.55□□□□□ -0.24
RNF41-202ENST00000394013 EIF2B5Q13144 721 aaKnown RBP13.55□□□□□ -0.24
RNF41-202ENST00000394013 LTB4RQ15722 352 aa13.55□□□□□ -0.24
RNF41-202ENST00000394013 SYPL1Q16563 259 aa13.55□□□□□ -0.24
RNF41-202ENST00000394013 KCTD21Q4G0X4 260 aa13.55□□□□□ -0.24
RNF41-202ENST00000394013 SAXO2Q658L1 398 aa13.55□□□□□ -0.24
RNF41-202ENST00000394013 FRMPD2BQ6IN97 320 aa13.55□□□□□ -0.24
RNF41-202ENST00000394013 CCDC71Q8IV32 467 aaPredicted RBP13.55□□□□□ -0.24
RNF41-202ENST00000394013 OR4N5Q8IXE1 308 aa13.55□□□□□ -0.24
RNF41-202ENST00000394013 TMEM19Q96HH6 336 aa13.55□□□□□ -0.24
RNF41-202ENST00000394013 OR2A14Q96R47 310 aa13.55□□□□□ -0.24
RNF41-202ENST00000394013 NPLQ9BXD5 320 aaPredicted RBP13.55□□□□□ -0.24
RNF41-202ENST00000394013 STARD5Q9NSY2 213 aa13.55□□□□□ -0.24
RNF41-202ENST00000394013 DDX18Q9NVP1 670 aaKnown RBP13.55□□□□□ -0.24
RNF41-202ENST00000394013 PAK1IP1Q9NWT1 392 aaPredicted RBP13.55□□□□□ -0.24
RNF41-202ENST00000394013 ADPRHL2Q9NX46 363 aa13.55□□□□□ -0.24
RNF41-202ENST00000394013 CDC14AQ9UNH5 594 aa13.55□□□□□ -0.24
RNF41-202ENST00000394013 COLEC10Q9Y6Z7 277 aa13.55□□□□□ -0.24
RNF41-202ENST00000394013 SMIM31A0A1B0GVY4 71 aa13.54□□□□□ -0.24
RNF41-202ENST00000394013 HMGN4O00479 90 aa13.54□□□□□ -0.24
RNF41-202ENST00000394013 MAN1A2O60476 641 aa13.54□□□□□ -0.24
RNF41-202ENST00000394013 SEMA7AO75326 666 aa13.54□□□□□ -0.24
RNF41-202ENST00000394013 HTR1AP08908 422 aa13.54□□□□□ -0.24
RNF41-202ENST00000394013 ZNF888P0CJ79 500 aaPredicted RBP13.54□□□□□ -0.24
RNF41-202ENST00000394013 OR12D1P0DN82 309 aa13.54□□□□□ -0.24
RNF41-202ENST00000394013 ARAFP10398 606 aa13.54□□□□□ -0.24
RNF41-202ENST00000394013 POU2F1P14859 743 aa13.54□□□□□ -0.24
RNF41-202ENST00000394013 CMPK1P30085 196 aa13.54□□□□□ -0.24
RNF41-202ENST00000394013 FMO3P31513 532 aa13.54□□□□□ -0.24
RNF41-202ENST00000394013 SLC5A2P31639 672 aa13.54□□□□□ -0.24
RNF41-202ENST00000394013 GRK3P35626 688 aa13.54□□□□□ -0.24
RNF41-202ENST00000394013 CDH12P55289 794 aa13.54□□□□□ -0.24
RNF41-202ENST00000394013 ITGA1P56199 1179 aa13.54□□□□□ -0.24
RNF41-202ENST00000394013 SRSF5Q13243 272 aaKnown RBP13.54□□□□□ -0.24
RNF41-202ENST00000394013 TRIM40Q6P9F5 258 aa13.54□□□□□ -0.24
RNF41-202ENST00000394013 THAP5Q7Z6K1 395 aa13.54□□□□□ -0.24
RNF41-202ENST00000394013 NLGN4XQ8N0W4 816 aa13.54□□□□□ -0.24
RNF41-202ENST00000394013 ATG16L2Q8NAA4 619 aa13.54□□□□□ -0.24
RNF41-202ENST00000394013 OR9Q2Q8NGE9 314 aa13.54□□□□□ -0.24
RNF41-202ENST00000394013 SUN3Q8TAQ9 357 aa13.54□□□□□ -0.24
RNF41-202ENST00000394013 DGCR14Q96DF8 476 aaKnown RBP13.54□□□□□ -0.24
RNF41-202ENST00000394013 C16orf58Q96GQ5 468 aa13.54□□□□□ -0.24
RNF41-202ENST00000394013 AMDHD1Q96NU7 426 aa13.54□□□□□ -0.24
RNF41-202ENST00000394013 REEP1Q9H902 201 aa13.54□□□□□ -0.24
RNF41-202ENST00000394013 TRPV5Q9NQA5 729 aa13.54□□□□□ -0.24
RNF41-202ENST00000394013 BAG5Q9UL15 447 aa13.54□□□□□ -0.24
RNF41-202ENST00000394013 MAPRE3Q9UPY8 281 aa13.54□□□□□ -0.24
RNF41-202ENST00000394013 CORO2BQ9UQ03 480 aa13.54□□□□□ -0.24
RNF41-202ENST00000394013 GMEB1Q9Y692 573 aa13.54□□□□□ -0.24
RNF41-202ENST00000394013 KCNE3Q9Y6H6 103 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms