RNA–Protein interactions for RNA: ENST00000380518.7

COL2A1-202, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL2A1, Length 5,071 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-202ENST00000380518 MAGIXQ9H6Y5 334 aa15.4■□□□□ 0.06
COL2A1-202ENST00000380518 ERVK-18Q9QC07 812 aa15.4■□□□□ 0.06
COL2A1-202ENST00000380518 SNNO75324 88 aaPredicted RBP15.4■□□□□ 0.06
COL2A1-202ENST00000380518 GPR32O75388 356 aa15.4■□□□□ 0.06
COL2A1-202ENST00000380518 MT-ND2P03891 347 aa15.4■□□□□ 0.06
COL2A1-202ENST00000380518 CSF2P04141 144 aa15.4■□□□□ 0.06
COL2A1-202ENST00000380518 RHCEP18577 417 aa15.4■□□□□ 0.06
COL2A1-202ENST00000380518 S1PR1P21453 382 aa15.4■□□□□ 0.06
COL2A1-202ENST00000380518 SLC9A3P48764 834 aa15.4■□□□□ 0.06
COL2A1-202ENST00000380518 CRISP1P54107 249 aa15.4■□□□□ 0.06
COL2A1-202ENST00000380518 GRK1Q15835 563 aa15.4■□□□□ 0.06
COL2A1-202ENST00000380518 GLT8D1Q68CQ7 371 aa15.4■□□□□ 0.06
COL2A1-202ENST00000380518 MAMDC4Q6UXC1 1216 aa15.4■□□□□ 0.06
COL2A1-202ENST00000380518 OR52B6Q8NGF0 335 aa15.4■□□□□ 0.06
COL2A1-202ENST00000380518 MAPK15Q8TD08 544 aa15.4■□□□□ 0.06
COL2A1-202ENST00000380518 MGLLQ99685 303 aa15.4■□□□□ 0.06
COL2A1-202ENST00000380518 PAK1IP1Q9NWT1 392 aaPredicted RBP15.4■□□□□ 0.06
COL2A1-202ENST00000380518 TEX13CA0A0J9YWL9 993 aa15.39■□□□□ 0.05
COL2A1-202ENST00000380518 PPM1BO75688 479 aa15.39■□□□□ 0.05
COL2A1-202ENST00000380518 SOX30O94993 753 aa15.39■□□□□ 0.05
COL2A1-202ENST00000380518 CSTAP01040 98 aa15.39■□□□□ 0.05
COL2A1-202ENST00000380518 CLCN2P51788 898 aa15.39■□□□□ 0.05
COL2A1-202ENST00000380518 EIF4HQ15056 248 aaKnown RBP15.39■□□□□ 0.05
COL2A1-202ENST00000380518 FOXRED2Q8IWF2 684 aa15.39■□□□□ 0.05
COL2A1-202ENST00000380518 MOCOSQ96EN8 888 aa15.39■□□□□ 0.05
COL2A1-202ENST00000380518 MMABQ96EY8 250 aaPredicted RBP15.39■□□□□ 0.05
COL2A1-202ENST00000380518 WDR92Q96MX6 357 aa15.39■□□□□ 0.05
COL2A1-202ENST00000380518 ABCD2Q9UBJ2 740 aa15.39■□□□□ 0.05
COL2A1-202ENST00000380518 ABCG2Q9UNQ0 655 aa15.39■□□□□ 0.05
COL2A1-202ENST00000380518 SH2B3Q9UQQ2 575 aa15.39■□□□□ 0.05
COL2A1-202ENST00000380518 I3L521 148 aa15.39■□□□□ 0.05
COL2A1-202ENST00000380518 PABPC4LP0CB38 370 aaKnown RBP15.39■□□□□ 0.05
COL2A1-202ENST00000380518 HSD17B1P14061 328 aa15.39■□□□□ 0.05
COL2A1-202ENST00000380518 GABRA3P34903 492 aa15.39■□□□□ 0.05
COL2A1-202ENST00000380518 MLLT10P55197 1068 aa15.39■□□□□ 0.05
COL2A1-202ENST00000380518 GALNT1Q10472 559 aaPredicted RBP15.39■□□□□ 0.05
COL2A1-202ENST00000380518 SLAMF1Q13291 335 aa15.39■□□□□ 0.05
COL2A1-202ENST00000380518 LIPKQ5VXJ0 399 aa15.39■□□□□ 0.05
COL2A1-202ENST00000380518 FAM43BQ6ZT52 329 aaPredicted RBP15.39■□□□□ 0.05
COL2A1-202ENST00000380518 NPWQ8N729 165 aa15.39■□□□□ 0.05
COL2A1-202ENST00000380518 ZNF565Q8N9K5 539 aa15.39■□□□□ 0.05
COL2A1-202ENST00000380518 GAL3ST3Q96A11 431 aa15.39■□□□□ 0.05
COL2A1-202ENST00000380518 SECISBP2Q96T21 854 aaKnown RBP15.39■□□□□ 0.05
COL2A1-202ENST00000380518 DZANK1Q9NVP4 752 aa15.39■□□□□ 0.05
COL2A1-202ENST00000380518 MAFFQ9ULX9 164 aa15.39■□□□□ 0.05
COL2A1-202ENST00000380518 SPEF1Q9Y4P9 236 aa15.39■□□□□ 0.05
COL2A1-202ENST00000380518 OR5K4A6NMS3 321 aa15.39■□□□□ 0.05
COL2A1-202ENST00000380518 ENDOUP21128 410 aaKnown RBP15.39■□□□□ 0.05
COL2A1-202ENST00000380518 MAP2K4P45985 399 aa15.39■□□□□ 0.05
COL2A1-202ENST00000380518 VSX2P58304 361 aaPredicted RBP15.39■□□□□ 0.05
COL2A1-202ENST00000380518 PSMA6P60900 246 aaKnown RBP15.39■□□□□ 0.05
COL2A1-202ENST00000380518 S100A10P60903 97 aa15.39■□□□□ 0.05
COL2A1-202ENST00000380518 RPL6Q02878 288 aaKnown RBP15.39■□□□□ 0.05
COL2A1-202ENST00000380518 ALG10Q5BKT4 473 aa15.39■□□□□ 0.05
COL2A1-202ENST00000380518 SPIN3Q5JUX0 258 aa15.39■□□□□ 0.05
COL2A1-202ENST00000380518 TMEM236Q5W0B7 351 aa15.39■□□□□ 0.05
COL2A1-202ENST00000380518 C6orf120Q7Z4R8 191 aa15.39■□□□□ 0.05
COL2A1-202ENST00000380518 RFT1Q96AA3 541 aa15.39■□□□□ 0.05
COL2A1-202ENST00000380518 CCDC120Q96HB5 630 aa15.39■□□□□ 0.05
COL2A1-202ENST00000380518 GMEB2Q9UKD1 530 aa15.39■□□□□ 0.05
COL2A1-202ENST00000380518 NUP50Q9UKX7 468 aa15.39■□□□□ 0.05
COL2A1-202ENST00000380518 ST14Q9Y5Y6 855 aa15.39■□□□□ 0.05
COL2A1-202ENST00000380518 C13orf42A0A1B0GVH6 325 aa15.39■□□□□ 0.05
COL2A1-202ENST00000380518 HNRNPA1P09651 372 aaKnown RBP eCLIP15.39■□□□□ 0.05
COL2A1-202ENST00000380518 CKMT1AP12532 417 aa15.39■□□□□ 0.05
COL2A1-202ENST00000380518 HK3P52790 923 aa15.39■□□□□ 0.05
COL2A1-202ENST00000380518 GSTM4Q03013 218 aa15.39■□□□□ 0.05
COL2A1-202ENST00000380518 OR4D1Q15615 310 aa15.39■□□□□ 0.05
COL2A1-202ENST00000380518 PIGGQ5H8A4 983 aa15.39■□□□□ 0.05
COL2A1-202ENST00000380518 CATSPEREQ5SY80 951 aa15.39■□□□□ 0.05
COL2A1-202ENST00000380518 TMIEQ8NEW7 156 aa15.39■□□□□ 0.05
COL2A1-202ENST00000380518 LGALS12Q96DT0 336 aa15.39■□□□□ 0.05
COL2A1-202ENST00000380518 ZC3H10Q96K80 434 aaKnown RBP15.39■□□□□ 0.05
COL2A1-202ENST00000380518 ZNF696Q9H7X3 374 aa15.39■□□□□ 0.05
COL2A1-202ENST00000380518 BACE2Q9Y5Z0 518 aa15.39■□□□□ 0.05
COL2A1-202ENST00000380518 KAT6AQ92794 2004 aa15.38■□□□□ 0.05
COL2A1-202ENST00000380518 A0A0G2JPF8 293 aa15.38■□□□□ 0.05
COL2A1-202ENST00000380518 HNRNPCL3B7ZW38 293 aa15.38■□□□□ 0.05
COL2A1-202ENST00000380518 H3BSH0 61 aa15.38■□□□□ 0.05
COL2A1-202ENST00000380518 HNRNPCL4P0DMR1 293 aa15.38■□□□□ 0.05
COL2A1-202ENST00000380518 DRD2P14416 443 aa15.38■□□□□ 0.05
COL2A1-202ENST00000380518 LCN1P31025 176 aa15.38■□□□□ 0.05
COL2A1-202ENST00000380518 SOX2P48431 317 aa15.38■□□□□ 0.05
COL2A1-202ENST00000380518 PGGT1BP53609 377 aa15.38■□□□□ 0.05
COL2A1-202ENST00000380518 CLDN10P78369 228 aa15.38■□□□□ 0.05
COL2A1-202ENST00000380518 RAB12Q6IQ22 244 aa15.38■□□□□ 0.05
COL2A1-202ENST00000380518 LCN8Q6JVE9 175 aa15.38■□□□□ 0.05
COL2A1-202ENST00000380518 CHRDL2Q6WN34 429 aa15.38■□□□□ 0.05
COL2A1-202ENST00000380518 ZNF700Q9H0M5 742 aa15.38■□□□□ 0.05
COL2A1-202ENST00000380518 CNOT11Q9UKZ1 510 aaKnown RBP15.38■□□□□ 0.05
COL2A1-202ENST00000380518 HSPE1-MOB4S4R3N1 261 aa15.38■□□□□ 0.05
COL2A1-202ENST00000380518 LOC100509620A0A075B734 347 aa15.38■□□□□ 0.05
COL2A1-202ENST00000380518 IGKV6D-21A0A0A0MT36 114 aa15.38■□□□□ 0.05
COL2A1-202ENST00000380518 HYKKA2RU49 373 aa15.38■□□□□ 0.05
COL2A1-202ENST00000380518 FANCGO15287 622 aa15.38■□□□□ 0.05
COL2A1-202ENST00000380518 OXSR1O95747 527 aaPredicted RBP15.38■□□□□ 0.05
COL2A1-202ENST00000380518 MRPL3P09001 348 aaKnown RBP15.38■□□□□ 0.05
COL2A1-202ENST00000380518 PTNP21246 168 aa15.38■□□□□ 0.05
COL2A1-202ENST00000380518 GCGRP47871 477 aa15.38■□□□□ 0.05
COL2A1-202ENST00000380518 DEFB134Q4QY38 66 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms