RNA–Protein interactions for RNA: ENST00000379016.7

HIPK3-202, Transcript of homeodomain interacting protein kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HIPK3, Length 7,345 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-202ENST00000379016 PTCHD3Q3KNS1 767 aa12.8□□□□□ -0.36
HIPK3-202ENST00000379016 PRRT3Q5FWE3 981 aa12.8□□□□□ -0.36
HIPK3-202ENST00000379016 ZPBP2Q6X784 338 aa12.8□□□□□ -0.36
HIPK3-202ENST00000379016 UNC93AQ86WB7 457 aa12.8□□□□□ -0.36
HIPK3-202ENST00000379016 CNEP1R1Q8N9A8 125 aa12.8□□□□□ -0.36
HIPK3-202ENST00000379016 SMIM12Q96EX1 92 aa12.8□□□□□ -0.36
HIPK3-202ENST00000379016 TWNKQ96RR1 684 aa12.8□□□□□ -0.36
HIPK3-202ENST00000379016 MROQ9BYG7 248 aa12.8□□□□□ -0.36
HIPK3-202ENST00000379016 NLGN3Q9NZ94 848 aa12.8□□□□□ -0.36
HIPK3-202ENST00000379016 JCADQ9P266 1359 aa12.8□□□□□ -0.36
HIPK3-202ENST00000379016 DNAJA2O60884 412 aa12.8□□□□□ -0.36
HIPK3-202ENST00000379016 CHRM1P11229 460 aaPredicted RBP12.8□□□□□ -0.36
HIPK3-202ENST00000379016 PRKCAP17252 672 aa12.8□□□□□ -0.36
HIPK3-202ENST00000379016 ST3GAL3Q11203 375 aa12.8□□□□□ -0.36
HIPK3-202ENST00000379016 HIST2H3PS2Q5TEC6 136 aa12.8□□□□□ -0.36
HIPK3-202ENST00000379016 ZNF783Q6ZMS7 281 aa12.8□□□□□ -0.36
HIPK3-202ENST00000379016 CNTNAP3BQ96NU0 1288 aa12.8□□□□□ -0.36
HIPK3-202ENST00000379016 LMF1Q96S06 567 aa12.8□□□□□ -0.36
HIPK3-202ENST00000379016 TLR6Q9Y2C9 796 aa12.8□□□□□ -0.36
HIPK3-202ENST00000379016 CDH10Q9Y6N8 788 aa12.8□□□□□ -0.36
HIPK3-202ENST00000379016 SYNMO15061 1565 aa12.8□□□□□ -0.36
HIPK3-202ENST00000379016 ABCB7O75027 752 aa12.8□□□□□ -0.36
HIPK3-202ENST00000379016 ADORA3P0DMS8 318 aa12.8□□□□□ -0.36
HIPK3-202ENST00000379016 LRIT3Q3SXY7 679 aa12.8□□□□□ -0.36
HIPK3-202ENST00000379016 ZBED5Q49AG3 693 aa12.8□□□□□ -0.36
HIPK3-202ENST00000379016 ZNF836Q6ZNA1 936 aa12.8□□□□□ -0.36
HIPK3-202ENST00000379016 NUDT13Q86X67 352 aa12.8□□□□□ -0.36
HIPK3-202ENST00000379016 TMEM104Q8NE00 496 aa12.8□□□□□ -0.36
HIPK3-202ENST00000379016 HSFY1Q96LI6 401 aa12.8□□□□□ -0.36
HIPK3-202ENST00000379016 FLRT1Q9NZU1 646 aa12.8□□□□□ -0.36
HIPK3-202ENST00000379016 TNS3Q68CZ2 1445 aa12.79□□□□□ -0.36
HIPK3-202ENST00000379016 CD8B2A6NJW9 211 aa12.79□□□□□ -0.36
HIPK3-202ENST00000379016 ALDOBP05062 364 aa12.79□□□□□ -0.36
HIPK3-202ENST00000379016 CD8BP10966 210 aa12.79□□□□□ -0.36
HIPK3-202ENST00000379016 RAB3BP20337 219 aa12.79□□□□□ -0.36
HIPK3-202ENST00000379016 PTGER4P35408 488 aa12.79□□□□□ -0.36
HIPK3-202ENST00000379016 TAF9Q16594 264 aa12.79□□□□□ -0.36
HIPK3-202ENST00000379016 S100A7AQ86SG5 101 aa12.79□□□□□ -0.36
HIPK3-202ENST00000379016 MAP4K3Q8IVH8 894 aa12.79□□□□□ -0.36
HIPK3-202ENST00000379016 TSEN2Q8NCE0 465 aaKnown RBP12.79□□□□□ -0.36
HIPK3-202ENST00000379016 STT3BQ8TCJ2 826 aa12.79□□□□□ -0.36
HIPK3-202ENST00000379016 TMEM80Q96HE8 168 aa12.79□□□□□ -0.36
HIPK3-202ENST00000379016 SLC30A2Q9BRI3 323 aa12.79□□□□□ -0.36
HIPK3-202ENST00000379016 KCNK13Q9HB14 408 aa12.79□□□□□ -0.36
HIPK3-202ENST00000379016 OR2J3O76001 311 aa12.79□□□□□ -0.36
HIPK3-202ENST00000379016 TGDSO95455 350 aa12.79□□□□□ -0.36
HIPK3-202ENST00000379016 XRCC1P18887 633 aaPredicted RBP12.79□□□□□ -0.36
HIPK3-202ENST00000379016 NDUFV2P19404 249 aa12.79□□□□□ -0.36
HIPK3-202ENST00000379016 PAPD4Q6PIY7 484 aaKnown RBP12.79□□□□□ -0.36
HIPK3-202ENST00000379016 HMGN2P46Q86SG4 172 aa12.79□□□□□ -0.36
HIPK3-202ENST00000379016 PRR22Q8IZ63 422 aa12.79□□□□□ -0.36
HIPK3-202ENST00000379016 TSPAN10Q9H1Z9 355 aaPredicted RBP12.79□□□□□ -0.36
HIPK3-202ENST00000379016 C2orf42Q9NWW7 574 aa12.79□□□□□ -0.36
HIPK3-202ENST00000379016 EXTL2Q9UBQ6 330 aa12.79□□□□□ -0.36
HIPK3-202ENST00000379016 TESQ9UGI8 421 aaKnown RBP12.79□□□□□ -0.36
HIPK3-202ENST00000379016 MGAT4BQ9UQ53 548 aa12.79□□□□□ -0.36
HIPK3-202ENST00000379016 WIF1Q9Y5W5 379 aa12.79□□□□□ -0.36
HIPK3-202ENST00000379016 KLRG2A4D1S0 409 aaPredicted RBP12.79□□□□□ -0.36
HIPK3-202ENST00000379016 OXTRP30559 389 aa12.79□□□□□ -0.36
HIPK3-202ENST00000379016 ACVR1BP36896 505 aa12.79□□□□□ -0.36
HIPK3-202ENST00000379016 VSX2P58304 361 aaPredicted RBP12.79□□□□□ -0.36
HIPK3-202ENST00000379016 RPS15P62841 145 aaKnown RBP12.79□□□□□ -0.36
HIPK3-202ENST00000379016 OGDHQ02218 1023 aa12.79□□□□□ -0.36
HIPK3-202ENST00000379016 GRB7Q14451 532 aa12.79□□□□□ -0.36
HIPK3-202ENST00000379016 PTPRCAPQ14761 206 aa12.79□□□□□ -0.36
HIPK3-202ENST00000379016 TMEM173Q86WV6 379 aaPredicted RBP12.79□□□□□ -0.36
HIPK3-202ENST00000379016 CCDC71LQ8N9Z2 235 aa12.79□□□□□ -0.36
HIPK3-202ENST00000379016 TERB2Q8NHR7 220 aa12.79□□□□□ -0.36
HIPK3-202ENST00000379016 RAB2BQ8WUD1 216 aa12.79□□□□□ -0.36
HIPK3-202ENST00000379016 TMEM234Q8WY98 164 aa12.79□□□□□ -0.36
HIPK3-202ENST00000379016 TP63Q9H3D4 680 aaPredicted RBP12.79□□□□□ -0.36
HIPK3-202ENST00000379016 OPA3Q9H6K4 179 aa12.79□□□□□ -0.36
HIPK3-202ENST00000379016 NRKQ7Z2Y5 1582 aa12.79□□□□□ -0.36
HIPK3-202ENST00000379016 CTTNBP2Q8WZ74 1663 aa12.79□□□□□ -0.36
HIPK3-202ENST00000379016 P04436 131 aa12.79□□□□□ -0.36
HIPK3-202ENST00000379016 H2AFB2P0C5Z0 115 aa12.79□□□□□ -0.36
HIPK3-202ENST00000379016 GABRA3P34903 492 aa12.79□□□□□ -0.36
HIPK3-202ENST00000379016 TAS2R20P59543 309 aa12.79□□□□□ -0.36
HIPK3-202ENST00000379016 GTPBP8Q8N3Z3 284 aaPredicted RBP12.79□□□□□ -0.36
HIPK3-202ENST00000379016 STEAP2Q8NFT2 490 aa12.79□□□□□ -0.36
HIPK3-202ENST00000379016 SLC22A17Q8WUG5 538 aa12.79□□□□□ -0.36
HIPK3-202ENST00000379016 SCRN2Q96FV2 425 aa12.79□□□□□ -0.36
HIPK3-202ENST00000379016 PPM1HQ9ULR3 514 aa12.79□□□□□ -0.36
HIPK3-202ENST00000379016 DCDC2BA2VCK2 349 aa12.79□□□□□ -0.36
HIPK3-202ENST00000379016 ZNF207O43670 478 aaKnown RBP12.79□□□□□ -0.36
HIPK3-202ENST00000379016 IL3P08700 152 aa12.79□□□□□ -0.36
HIPK3-202ENST00000379016 ERP29P30040 261 aaKnown RBP12.79□□□□□ -0.36
HIPK3-202ENST00000379016 NSG1P42857 185 aa12.79□□□□□ -0.36
HIPK3-202ENST00000379016 LASP1Q14847 261 aaKnown RBP12.79□□□□□ -0.36
HIPK3-202ENST00000379016 FJX1Q86VR8 437 aa12.79□□□□□ -0.36
HIPK3-202ENST00000379016 ZNF419Q96HQ0 510 aaPredicted RBP12.79□□□□□ -0.36
HIPK3-202ENST00000379016 TMEM209Q96SK2 561 aa12.79□□□□□ -0.36
HIPK3-202ENST00000379016 MYH3P11055 1940 aa12.79□□□□□ -0.36
HIPK3-202ENST00000379016 CLIC1O00299 241 aa12.78□□□□□ -0.36
HIPK3-202ENST00000379016 BPGMP07738 259 aa12.78□□□□□ -0.36
HIPK3-202ENST00000379016 RAP2AP10114 183 aa12.78□□□□□ -0.36
HIPK3-202ENST00000379016 CD34P28906 385 aa12.78□□□□□ -0.36
HIPK3-202ENST00000379016 SOX3P41225 446 aa12.78□□□□□ -0.36
HIPK3-202ENST00000379016 RAB7AP51149 207 aa12.78□□□□□ -0.36
HIPK3-202ENST00000379016 SLC25A52Q3SY17 297 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms