RNA–Protein interactions for RNA: ENST00000376490.7

CLCN6-203, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 963 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-203ENST00000376490 UCN3Q969E3 161 aa13.3□□□□□ -0.28
CLCN6-203ENST00000376490 VMP1Q96GC9 406 aa13.3□□□□□ -0.28
CLCN6-203ENST00000376490 FRG2BQ96QU4 278 aa13.3□□□□□ -0.28
CLCN6-203ENST00000376490 SERPINI1Q99574 410 aa13.3□□□□□ -0.28
CLCN6-203ENST00000376490 RPF2Q9H7B2 306 aaKnown RBP13.3□□□□□ -0.28
CLCN6-203ENST00000376490 DDX31Q9H8H2 851 aaKnown RBP13.3□□□□□ -0.28
CLCN6-203ENST00000376490 LIN28AQ9H9Z2 209 aaKnown RBP13.3□□□□□ -0.28
CLCN6-203ENST00000376490 KLHL1Q9NR64 748 aa13.3□□□□□ -0.28
CLCN6-203ENST00000376490 FARSBQ9NSD9 589 aaKnown RBP13.3□□□□□ -0.28
CLCN6-203ENST00000376490 OLAHQ9NV23 265 aa13.3□□□□□ -0.28
CLCN6-203ENST00000376490 DCDC2Q9UHG0 476 aa13.3□□□□□ -0.28
CLCN6-203ENST00000376490 ZNF225Q9UK10 706 aa13.3□□□□□ -0.28
CLCN6-203ENST00000376490 ASB4Q9Y574 426 aa13.3□□□□□ -0.28
CLCN6-203ENST00000376490 CLCA3PQ9Y6N3 262 aa13.3□□□□□ -0.28
CLCN6-203ENST00000376490 USP9XQ93008 2570 aaPredicted RBP13.3□□□□□ -0.28
CLCN6-203ENST00000376490 ASH1LQ9NR48 2969 aaKnown RBP13.3□□□□□ -0.28
CLCN6-203ENST00000376490 DIDO1Q9BTC0 2240 aaKnown RBP13.29□□□□□ -0.28
CLCN6-203ENST00000376490 POLEQ07864 2286 aa13.29□□□□□ -0.28
CLCN6-203ENST00000376490 ICE1Q9Y2F5 2266 aa13.29□□□□□ -0.28
CLCN6-203ENST00000376490 A0A0A6YYD5 115 aa13.29□□□□□ -0.28
CLCN6-203ENST00000376490 A0A1W2PR48 441 aa13.29□□□□□ -0.28
CLCN6-203ENST00000376490 BLACEA4D250 179 aa13.29□□□□□ -0.28
CLCN6-203ENST00000376490 SMIM23A6NLE4 172 aa13.29□□□□□ -0.28
CLCN6-203ENST00000376490 PROM1O43490 865 aa13.29□□□□□ -0.28
CLCN6-203ENST00000376490 TMPRSS11DO60235 418 aa13.29□□□□□ -0.28
CLCN6-203ENST00000376490 FGF17O60258 216 aa13.29□□□□□ -0.28
CLCN6-203ENST00000376490 NEURL1O76050 574 aa13.29□□□□□ -0.28
CLCN6-203ENST00000376490 WISP2O76076 250 aa13.29□□□□□ -0.28
CLCN6-203ENST00000376490 SUPT7LO94864 414 aa13.29□□□□□ -0.28
CLCN6-203ENST00000376490 OR4F21O95013 312 aa13.29□□□□□ -0.28
CLCN6-203ENST00000376490 OTCP00480 354 aa13.29□□□□□ -0.28
CLCN6-203ENST00000376490 GSTA1P08263 222 aa13.29□□□□□ -0.28
CLCN6-203ENST00000376490 FAM58BPP0C7Q3 252 aa13.29□□□□□ -0.28
CLCN6-203ENST00000376490 EDN3P14138 238 aa13.29□□□□□ -0.28
CLCN6-203ENST00000376490 IMPDH1P20839 514 aa13.29□□□□□ -0.28
CLCN6-203ENST00000376490 ATP5F1P24539 256 aaPredicted RBP13.29□□□□□ -0.28
CLCN6-203ENST00000376490 HERVK_113P63132 956 aa13.29□□□□□ -0.28
CLCN6-203ENST00000376490 PMP22Q01453 160 aa13.29□□□□□ -0.28
CLCN6-203ENST00000376490 CLCQ05315 142 aa13.29□□□□□ -0.28
CLCN6-203ENST00000376490 IFT88Q13099 833 aa13.29□□□□□ -0.28
CLCN6-203ENST00000376490 SERTAD2Q14140 314 aa13.29□□□□□ -0.28
CLCN6-203ENST00000376490 ZNF678Q5SXM1 525 aa13.29□□□□□ -0.28
CLCN6-203ENST00000376490 MRM1Q6IN84 353 aaKnown RBP13.29□□□□□ -0.28
CLCN6-203ENST00000376490 LETMD1Q6P1Q0 360 aa13.29□□□□□ -0.28
CLCN6-203ENST00000376490 C16orf47Q6ZP98 133 aaPredicted RBP13.29□□□□□ -0.28
CLCN6-203ENST00000376490 SH2D5Q6ZV89 423 aa13.29□□□□□ -0.28
CLCN6-203ENST00000376490 ARMC10Q8N2F6 343 aa13.29□□□□□ -0.28
CLCN6-203ENST00000376490 ZNF321PQ8N8H1 164 aa13.29□□□□□ -0.28
CLCN6-203ENST00000376490 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.29□□□□□ -0.28
CLCN6-203ENST00000376490 SLX1AQ9BQ83 275 aa13.29□□□□□ -0.28
CLCN6-203ENST00000376490 ERVK-6Q9BXR3 956 aa13.29□□□□□ -0.28
CLCN6-203ENST00000376490 MS4A12Q9NXJ0 267 aa13.29□□□□□ -0.28
CLCN6-203ENST00000376490 LRFN1Q9P244 771 aa13.29□□□□□ -0.28
CLCN6-203ENST00000376490 PHF11Q9UIL8 331 aa13.29□□□□□ -0.28
CLCN6-203ENST00000376490 EMCNQ9ULC0 261 aa13.29□□□□□ -0.28
CLCN6-203ENST00000376490 PPT2Q9UMR5 302 aa13.29□□□□□ -0.28
CLCN6-203ENST00000376490 PTPN13Q12923 2485 aa13.29□□□□□ -0.28
CLCN6-203ENST00000376490 GLOD5A6NK44 160 aa13.28□□□□□ -0.28
CLCN6-203ENST00000376490 C17orf105B2RV13 164 aa13.28□□□□□ -0.28
CLCN6-203ENST00000376490 ZFAND5O76080 213 aa13.28□□□□□ -0.28
CLCN6-203ENST00000376490 PDYNP01213 254 aa13.28□□□□□ -0.28
CLCN6-203ENST00000376490 SP1P08047 785 aa13.28□□□□□ -0.28
CLCN6-203ENST00000376490 CD46P15529 392 aa13.28□□□□□ -0.28
CLCN6-203ENST00000376490 MST1P26927 711 aa13.28□□□□□ -0.28
CLCN6-203ENST00000376490 TLX1P31314 330 aaPredicted RBP13.28□□□□□ -0.28
CLCN6-203ENST00000376490 IGLV3-21P80748 117 aaPredicted RBP13.28□□□□□ -0.28
CLCN6-203ENST00000376490 TNFRSF17Q02223 184 aa13.28□□□□□ -0.28
CLCN6-203ENST00000376490 FOLH1Q04609 750 aa13.28□□□□□ -0.28
CLCN6-203ENST00000376490 INAQ16352 499 aa13.28□□□□□ -0.28
CLCN6-203ENST00000376490 GGTA1PQ4G0N0 100 aa13.28□□□□□ -0.28
CLCN6-203ENST00000376490 SLC25A25Q6KCM7 469 aa13.28□□□□□ -0.28
CLCN6-203ENST00000376490 CYP20A1Q6UW02 462 aa13.28□□□□□ -0.28
CLCN6-203ENST00000376490 DGAT2L6Q6ZPD8 337 aa13.28□□□□□ -0.28
CLCN6-203ENST00000376490 ZNF227Q86WZ6 799 aa13.28□□□□□ -0.28
CLCN6-203ENST00000376490 MORN4Q8NDC4 146 aa13.28□□□□□ -0.28
CLCN6-203ENST00000376490 DNAJB8Q8NHS0 232 aa13.28□□□□□ -0.28
CLCN6-203ENST00000376490 EPS8L3Q8TE67 593 aaKnown RBP13.28□□□□□ -0.28
CLCN6-203ENST00000376490 DOK4Q8TEW6 326 aa13.28□□□□□ -0.28
CLCN6-203ENST00000376490 NR4A3Q92570 626 aa13.28□□□□□ -0.28
CLCN6-203ENST00000376490 TANKQ92844 425 aa13.28□□□□□ -0.28
CLCN6-203ENST00000376490 DAZLQ92904 295 aaKnown RBP13.28□□□□□ -0.28
CLCN6-203ENST00000376490 PPWD1Q96BP3 646 aaKnown RBP13.28□□□□□ -0.28
CLCN6-203ENST00000376490 SCMH1Q96GD3 660 aa13.28□□□□□ -0.28
CLCN6-203ENST00000376490 TMEM237Q96Q45 408 aa13.28□□□□□ -0.28
CLCN6-203ENST00000376490 MRPL1Q9BYD6 325 aaKnown RBP13.28□□□□□ -0.28
CLCN6-203ENST00000376490 OR8D2Q9GZM6 311 aa13.28□□□□□ -0.28
CLCN6-203ENST00000376490 ELOVL6Q9H5J4 265 aa13.28□□□□□ -0.28
CLCN6-203ENST00000376490 PCDHGB6Q9Y5F9 930 aa13.28□□□□□ -0.28
CLCN6-203ENST00000376490 NINQ8N4C6 2090 aa13.28□□□□□ -0.28
CLCN6-203ENST00000376490 UTP20O75691 2785 aaKnown RBP13.28□□□□□ -0.28
CLCN6-203ENST00000376490 COL12A1Q99715 3063 aa13.28□□□□□ -0.28
CLCN6-203ENST00000376490 LRRK2Q5S007 2527 aa13.27□□□□□ -0.29
CLCN6-203ENST00000376490 SYNDIG1LA6NDD5 238 aa13.27□□□□□ -0.29
CLCN6-203ENST00000376490 TMEM200CA6NKL6 621 aa13.27□□□□□ -0.29
CLCN6-203ENST00000376490 FCHO1O14526 889 aa13.27□□□□□ -0.29
CLCN6-203ENST00000376490 PGRMC2O15173 223 aa13.27□□□□□ -0.29
CLCN6-203ENST00000376490 ITGA10O75578 1167 aa13.27□□□□□ -0.29
CLCN6-203ENST00000376490 DDAH2O95865 285 aa13.27□□□□□ -0.29
CLCN6-203ENST00000376490 CRYABP02511 175 aaKnown RBP13.27□□□□□ -0.29
CLCN6-203ENST00000376490 KLK1P06870 262 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms