RNA–Protein interactions for RNA: ENST00000376387.4

TM9SF2-201, Transcript of transmembrane 9 superfamily member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2-201ENST00000376387 PRM3Q9NNZ6 103 aa10.99□□□□□ -0.65
TM9SF2-201ENST00000376387 SH3BP4Q9P0V3 963 aa10.99□□□□□ -0.65
TM9SF2-201ENST00000376387 PLEKHB1Q9UF11 243 aaPredicted RBP10.99□□□□□ -0.65
TM9SF2-201ENST00000376387 EXO1Q9UQ84 846 aaKnown RBP10.99□□□□□ -0.65
TM9SF2-201ENST00000376387 CLCA3PQ9Y6N3 262 aa10.99□□□□□ -0.65
TM9SF2-201ENST00000376387 C2orf78A6NCI8 922 aa10.98□□□□□ -0.65
TM9SF2-201ENST00000376387 SCAMP2O15127 329 aaKnown RBP10.98□□□□□ -0.65
TM9SF2-201ENST00000376387 CLDN11O75508 207 aa10.98□□□□□ -0.65
TM9SF2-201ENST00000376387 CORO1AP31146 461 aaKnown RBP10.98□□□□□ -0.65
TM9SF2-201ENST00000376387 NFE2L1Q14494 772 aa10.98□□□□□ -0.65
TM9SF2-201ENST00000376387 TATDN3Q17R31 274 aa10.98□□□□□ -0.65
TM9SF2-201ENST00000376387 GGTA1PQ4G0N0 100 aa10.98□□□□□ -0.65
TM9SF2-201ENST00000376387 CPTPQ5TA50 214 aa10.98□□□□□ -0.65
TM9SF2-201ENST00000376387 FRMPD2BQ6IN97 320 aa10.98□□□□□ -0.65
TM9SF2-201ENST00000376387 ZNF704Q6ZNC4 412 aaPredicted RBP10.98□□□□□ -0.65
TM9SF2-201ENST00000376387 GPR26Q8NDV2 337 aa10.98□□□□□ -0.65
TM9SF2-201ENST00000376387 CREB3L4Q8TEY5 395 aa10.98□□□□□ -0.65
TM9SF2-201ENST00000376387 TRIM63Q969Q1 353 aa10.98□□□□□ -0.65
TM9SF2-201ENST00000376387 FCRL1Q96LA6 429 aa10.98□□□□□ -0.65
TM9SF2-201ENST00000376387 WDFY2Q96P53 400 aa10.98□□□□□ -0.65
TM9SF2-201ENST00000376387 NMNAT1Q9HAN9 279 aaPredicted RBP10.98□□□□□ -0.65
TM9SF2-201ENST00000376387 HCSTQ9UBK5 93 aa10.98□□□□□ -0.65
TM9SF2-201ENST00000376387 TMPRSS11EQ9UL52 423 aa10.98□□□□□ -0.65
TM9SF2-201ENST00000376387 ALG5Q9Y673 324 aa10.98□□□□□ -0.65
TM9SF2-201ENST00000376387 TRBV5-4A0A0C4DH59 114 aa10.98□□□□□ -0.65
TM9SF2-201ENST00000376387 SLC35F4A4IF30 521 aa10.98□□□□□ -0.65
TM9SF2-201ENST00000376387 S100A6P06703 90 aa10.98□□□□□ -0.65
TM9SF2-201ENST00000376387 APEX1P27695 318 aaKnown RBP10.98□□□□□ -0.65
TM9SF2-201ENST00000376387 OPRD1P41143 372 aa10.98□□□□□ -0.65
TM9SF2-201ENST00000376387 LIMS1P48059 325 aa10.98□□□□□ -0.65
TM9SF2-201ENST00000376387 ARFIP1P53367 373 aa10.98□□□□□ -0.65
TM9SF2-201ENST00000376387 CRISP1P54107 249 aa10.98□□□□□ -0.65
TM9SF2-201ENST00000376387 CDKN3Q16667 212 aa10.98□□□□□ -0.65
TM9SF2-201ENST00000376387 FAM209BQ5JX69 171 aa10.98□□□□□ -0.65
TM9SF2-201ENST00000376387 CLLU1OSQ5K130 101 aa10.98□□□□□ -0.65
TM9SF2-201ENST00000376387 LAMTOR1Q6IAA8 161 aa10.98□□□□□ -0.65
TM9SF2-201ENST00000376387 CLEC2AQ6UVW9 174 aa10.98□□□□□ -0.65
TM9SF2-201ENST00000376387 LRRC70Q7Z2Q7 622 aa10.98□□□□□ -0.65
TM9SF2-201ENST00000376387 KRT73Q86Y46 540 aa10.98□□□□□ -0.65
TM9SF2-201ENST00000376387 TMC8Q8IU68 726 aa10.98□□□□□ -0.65
TM9SF2-201ENST00000376387 NPAS3Q8IXF0 933 aa10.98□□□□□ -0.65
TM9SF2-201ENST00000376387 C1orf52Q8N6N3 182 aaKnown RBP10.98□□□□□ -0.65
TM9SF2-201ENST00000376387 WFDC5Q8TCV5 224 aa10.98□□□□□ -0.65
TM9SF2-201ENST00000376387 SAMD11Q96NU1 681 aa10.98□□□□□ -0.65
TM9SF2-201ENST00000376387 ZNF717Q9BY31 904 aaPredicted RBP10.98□□□□□ -0.65
TM9SF2-201ENST00000376387 POLR2J2Q9GZM3 115 aaKnown RBP10.98□□□□□ -0.65
TM9SF2-201ENST00000376387 MAT2BQ9NZL9 334 aa10.98□□□□□ -0.65
TM9SF2-201ENST00000376387 CNOT2Q9NZN8 540 aaKnown RBP10.98□□□□□ -0.65
TM9SF2-201ENST00000376387 VPS29Q9UBQ0 182 aa10.98□□□□□ -0.65
TM9SF2-201ENST00000376387 STUB1Q9UNE7 303 aa10.98□□□□□ -0.65
TM9SF2-201ENST00000376387 MTMR11A4FU01 709 aa10.97□□□□□ -0.65
TM9SF2-201ENST00000376387 E7EQ34 232 aa10.97□□□□□ -0.65
TM9SF2-201ENST00000376387 TPST2O60704 377 aa10.97□□□□□ -0.65
TM9SF2-201ENST00000376387 GADD45GO95257 159 aa10.97□□□□□ -0.65
TM9SF2-201ENST00000376387 TSPAN19P0C672 248 aa10.97□□□□□ -0.65
TM9SF2-201ENST00000376387 PSMA1P25786 263 aaKnown RBP10.97□□□□□ -0.65
TM9SF2-201ENST00000376387 UQCRC1P31930 480 aa10.97□□□□□ -0.65
TM9SF2-201ENST00000376387 SLC11A2P49281 568 aa10.97□□□□□ -0.65
TM9SF2-201ENST00000376387 MAN2A2P49641 1150 aa10.97□□□□□ -0.65
TM9SF2-201ENST00000376387 PFN3P60673 137 aa10.97□□□□□ -0.65
TM9SF2-201ENST00000376387 HBA1P69905 142 aa10.97□□□□□ -0.65
TM9SF2-201ENST00000376387 PDZK1Q5T2W1 519 aa10.97□□□□□ -0.65
TM9SF2-201ENST00000376387 SERINC5Q86VE9 423 aa10.97□□□□□ -0.65
TM9SF2-201ENST00000376387 NXPE1Q8N323 547 aa10.97□□□□□ -0.65
TM9SF2-201ENST00000376387 FAM181AQ8N9Y4 354 aa10.97□□□□□ -0.65
TM9SF2-201ENST00000376387 ATP6V1C2Q8NEY4 427 aa10.97□□□□□ -0.65
TM9SF2-201ENST00000376387 OR9Q1Q8NGQ5 310 aa10.97□□□□□ -0.65
TM9SF2-201ENST00000376387 CIDECQ96AQ7 238 aaPredicted RBP10.97□□□□□ -0.65
TM9SF2-201ENST00000376387 GPR62Q9BZJ7 368 aa10.97□□□□□ -0.65
TM9SF2-201ENST00000376387 TXNL4BQ9NX01 149 aaKnown RBP10.97□□□□□ -0.65
TM9SF2-201ENST00000376387 HCN4Q9Y3Q4 1203 aa10.97□□□□□ -0.65
TM9SF2-201ENST00000376387 MAP4K5Q9Y4K4 846 aa10.97□□□□□ -0.65
TM9SF2-201ENST00000376387 TRBV4-1A0A0J9YWV2 114 aa10.97□□□□□ -0.65
TM9SF2-201ENST00000376387 A0A1W2PQ72 361 aa10.97□□□□□ -0.65
TM9SF2-201ENST00000376387 HYKKA2RU49 373 aa10.97□□□□□ -0.65
TM9SF2-201ENST00000376387 APOL3O95236 402 aa10.97□□□□□ -0.65
TM9SF2-201ENST00000376387 OLFM2O95897 454 aa10.97□□□□□ -0.65
TM9SF2-201ENST00000376387 SCGB1D2O95969 90 aa10.97□□□□□ -0.65
TM9SF2-201ENST00000376387 ZDHHC11BP0C7U3 371 aa10.97□□□□□ -0.65
TM9SF2-201ENST00000376387 CYP2A6P11509 494 aaPredicted RBP10.97□□□□□ -0.65
TM9SF2-201ENST00000376387 PSKH1P11801 424 aa10.97□□□□□ -0.65
TM9SF2-201ENST00000376387 EDN3P14138 238 aa10.97□□□□□ -0.65
TM9SF2-201ENST00000376387 SELLP14151 372 aa10.97□□□□□ -0.65
TM9SF2-201ENST00000376387 POU3F3P20264 500 aaPredicted RBP10.97□□□□□ -0.65
TM9SF2-201ENST00000376387 IDSP22304 550 aa10.97□□□□□ -0.65
TM9SF2-201ENST00000376387 CSTF2P33240 577 aaKnown RBP eCLIP10.97□□□□□ -0.65
TM9SF2-201ENST00000376387 XCR1P46094 333 aa10.97□□□□□ -0.65
TM9SF2-201ENST00000376387 TEKQ02763 1124 aa10.97□□□□□ -0.65
TM9SF2-201ENST00000376387 RUNX1T1Q06455 604 aa10.97□□□□□ -0.65
TM9SF2-201ENST00000376387 SCARB2Q14108 478 aa10.97□□□□□ -0.65
TM9SF2-201ENST00000376387 SERPINA13PQ6UXR4 307 aa10.97□□□□□ -0.65
TM9SF2-201ENST00000376387 DPY19L3Q6ZPD9 716 aa10.97□□□□□ -0.65
TM9SF2-201ENST00000376387 RTN4RL1Q86UN2 441 aaPredicted RBP10.97□□□□□ -0.65
TM9SF2-201ENST00000376387 PHC2Q8IXK0 858 aa10.97□□□□□ -0.65
TM9SF2-201ENST00000376387 OR6C4Q8NGE1 309 aa10.97□□□□□ -0.65
TM9SF2-201ENST00000376387 SLC25A46Q96AG3 418 aa10.97□□□□□ -0.65
TM9SF2-201ENST00000376387 PKP4Q99569 1192 aa10.97□□□□□ -0.65
TM9SF2-201ENST00000376387 SMAD5Q99717 465 aaKnown RBP10.97□□□□□ -0.65
TM9SF2-201ENST00000376387 HDHD5Q9BXW7 423 aa10.97□□□□□ -0.65
TM9SF2-201ENST00000376387 RSPO3Q9BXY4 272 aaPredicted RBP10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms