RNA–Protein interactions for RNA: ENST00000375703.7

MSH5-201, Transcript of mutS homolog 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSH5, Length 2,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-201ENST00000375703 SOD1P00441 154 aa13.85□□□□□ -0.19
MSH5-201ENST00000375703 OSMP13725 252 aa13.85□□□□□ -0.19
MSH5-201ENST00000375703 GPR1P46091 355 aa13.85□□□□□ -0.19
MSH5-201ENST00000375703 SSX1Q16384 188 aa13.85□□□□□ -0.19
MSH5-201ENST00000375703 TRNT1Q96Q11 434 aaKnown RBP13.85□□□□□ -0.19
MSH5-201ENST00000375703 SLX1AQ9BQ83 275 aa13.85□□□□□ -0.19
MSH5-201ENST00000375703 CNPPD1Q9BV87 410 aa13.85□□□□□ -0.19
MSH5-201ENST00000375703 SLC25A19Q9HC21 320 aa13.85□□□□□ -0.19
MSH5-201ENST00000375703 LOC110117498-PIK3R3F6TDL0 507 aa13.85□□□□□ -0.19
MSH5-201ENST00000375703 KMOO15229 486 aa13.85□□□□□ -0.19
MSH5-201ENST00000375703 MOSPD3O75425 235 aa13.85□□□□□ -0.19
MSH5-201ENST00000375703 ADAP00813 363 aa13.85□□□□□ -0.19
MSH5-201ENST00000375703 FEN1P39748 380 aaKnown RBP13.85□□□□□ -0.19
MSH5-201ENST00000375703 ETV6P41212 452 aa13.85□□□□□ -0.19
MSH5-201ENST00000375703 DGKGP49619 791 aa13.85□□□□□ -0.19
MSH5-201ENST00000375703 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.85□□□□□ -0.19
MSH5-201ENST00000375703 NFE2L1Q14494 772 aa13.85□□□□□ -0.19
MSH5-201ENST00000375703 ARHGAP15Q53QZ3 475 aa13.85□□□□□ -0.19
MSH5-201ENST00000375703 PRAMEF14Q5SWL7 426 aa13.85□□□□□ -0.19
MSH5-201ENST00000375703 DCST1Q5T197 706 aa13.85□□□□□ -0.19
MSH5-201ENST00000375703 PRAMEF13Q5VWM6 474 aa13.85□□□□□ -0.19
MSH5-201ENST00000375703 RAET1GQ6H3X3 334 aa13.85□□□□□ -0.19
MSH5-201ENST00000375703 CCDC190Q86UF4 302 aa13.85□□□□□ -0.19
MSH5-201ENST00000375703 KRT78Q8N1N4 520 aa13.85□□□□□ -0.19
MSH5-201ENST00000375703 PIK3R3Q92569 461 aa13.85□□□□□ -0.19
MSH5-201ENST00000375703 CFHR5Q9BXR6 569 aa13.85□□□□□ -0.19
MSH5-201ENST00000375703 EXOSC4Q9NPD3 245 aaKnown RBP13.85□□□□□ -0.19
MSH5-201ENST00000375703 PDZK1P1A8MUH7 402 aa13.84□□□□□ -0.19
MSH5-201ENST00000375703 APOA1P02647 267 aa13.84□□□□□ -0.19
MSH5-201ENST00000375703 PIPP12273 146 aaPredicted RBP13.84□□□□□ -0.19
MSH5-201ENST00000375703 CKMT1AP12532 417 aa13.84□□□□□ -0.19
MSH5-201ENST00000375703 DDX6P26196 483 aaKnown RBP eCLIP13.84□□□□□ -0.19
MSH5-201ENST00000375703 METAP1P53582 386 aa13.84□□□□□ -0.19
MSH5-201ENST00000375703 ILKQ13418 452 aa13.84□□□□□ -0.19
MSH5-201ENST00000375703 DOC2BQ14184 412 aa13.84□□□□□ -0.19
MSH5-201ENST00000375703 APOBEC4Q8WW27 367 aaKnown RBP13.84□□□□□ -0.19
MSH5-201ENST00000375703 OR5P2Q8WZ92 322 aa13.84□□□□□ -0.19
MSH5-201ENST00000375703 RAB8BQ92930 207 aa13.84□□□□□ -0.19
MSH5-201ENST00000375703 NEURL3Q96EH8 262 aa13.84□□□□□ -0.19
MSH5-201ENST00000375703 TMEM19Q96HH6 336 aa13.84□□□□□ -0.19
MSH5-201ENST00000375703 TAPBPLQ9BX59 468 aa13.84□□□□□ -0.19
MSH5-201ENST00000375703 TMEM39AQ9NV64 488 aa13.84□□□□□ -0.19
MSH5-201ENST00000375703 CRNNQ9UBG3 495 aaPredicted RBP13.84□□□□□ -0.19
MSH5-201ENST00000375703 REV1Q9UBZ9 1251 aa13.84□□□□□ -0.19
MSH5-201ENST00000375703 PLAGL1Q9UM63 463 aa13.84□□□□□ -0.19
MSH5-201ENST00000375703 ASF1AQ9Y294 204 aa13.84□□□□□ -0.19
MSH5-201ENST00000375703 RBMX2Q9Y388 322 aaKnown RBP13.84□□□□□ -0.19
MSH5-201ENST00000375703 DSPPQ9NZW4 1301 aa13.84□□□□□ -0.19
MSH5-201ENST00000375703 RTCAO00442 366 aaKnown RBP13.84□□□□□ -0.19
MSH5-201ENST00000375703 OR10H3O60404 316 aa13.84□□□□□ -0.19
MSH5-201ENST00000375703 MFN2O95140 757 aa13.84□□□□□ -0.19
MSH5-201ENST00000375703 SOX14O95416 240 aa13.84□□□□□ -0.19
MSH5-201ENST00000375703 SCG5P05408 212 aa13.84□□□□□ -0.19
MSH5-201ENST00000375703 IGFBP1P08833 259 aaPredicted RBP13.84□□□□□ -0.19
MSH5-201ENST00000375703 PTPN2P17706 415 aa13.84□□□□□ -0.19
MSH5-201ENST00000375703 DDCP20711 480 aa13.84□□□□□ -0.19
MSH5-201ENST00000375703 ACADLP28330 430 aa13.84□□□□□ -0.19
MSH5-201ENST00000375703 CSTF2P33240 577 aaKnown RBP eCLIP13.84□□□□□ -0.19
MSH5-201ENST00000375703 PCYT1AP49585 367 aa13.84□□□□□ -0.19
MSH5-201ENST00000375703 SNRPGP62308 76 aaKnown RBP13.84□□□□□ -0.19
MSH5-201ENST00000375703 RHAGQ02094 409 aa13.84□□□□□ -0.19
MSH5-201ENST00000375703 MN1Q10571 1320 aaPredicted RBP13.84□□□□□ -0.19
MSH5-201ENST00000375703 SEC23BQ15437 767 aa13.84□□□□□ -0.19
MSH5-201ENST00000375703 SAXO2Q658L1 398 aa13.84□□□□□ -0.19
MSH5-201ENST00000375703 TCTN3Q6NUS6 607 aa13.84□□□□□ -0.19
MSH5-201ENST00000375703 TMEM53Q6P2H8 277 aa13.84□□□□□ -0.19
MSH5-201ENST00000375703 ZNF547Q8IVP9 402 aa13.84□□□□□ -0.19
MSH5-201ENST00000375703 REM2Q8IYK8 340 aaPredicted RBP13.84□□□□□ -0.19
MSH5-201ENST00000375703 SLC34A3Q8N130 599 aa13.84□□□□□ -0.19
MSH5-201ENST00000375703 GPR32P1Q8NGA4 272 aa13.84□□□□□ -0.19
MSH5-201ENST00000375703 KLHL6Q8WZ60 621 aa13.84□□□□□ -0.19
MSH5-201ENST00000375703 OPALINQ96PE5 141 aa13.84□□□□□ -0.19
MSH5-201ENST00000375703 ZDHHC5Q9C0B5 715 aa13.84□□□□□ -0.19
MSH5-201ENST00000375703 A4GALTQ9NPC4 353 aa13.84□□□□□ -0.19
MSH5-201ENST00000375703 ERVK13-1Q9NX77 482 aa13.84□□□□□ -0.19
MSH5-201ENST00000375703 MGAT4BQ9UQ53 548 aa13.84□□□□□ -0.19
MSH5-201ENST00000375703 HCFC2Q9Y5Z7 792 aa13.84□□□□□ -0.19
MSH5-201ENST00000375703 DOCK6Q96HP0 2047 aa13.84□□□□□ -0.19
MSH5-201ENST00000375703 C17orf113A0A1B0GUU1 675 aa13.84□□□□□ -0.19
MSH5-201ENST00000375703 H3BN98 237 aa13.84□□□□□ -0.19
MSH5-201ENST00000375703 PLPP1O14494 284 aa13.84□□□□□ -0.19
MSH5-201ENST00000375703 GSTT2P0CG29 244 aa13.84□□□□□ -0.19
MSH5-201ENST00000375703 GSTT2BP0CG30 244 aa13.84□□□□□ -0.19
MSH5-201ENST00000375703 CD72P21854 359 aa13.84□□□□□ -0.19
MSH5-201ENST00000375703 MAPK12P53778 367 aa13.84□□□□□ -0.19
MSH5-201ENST00000375703 ST8SIA6P61647 398 aa13.84□□□□□ -0.19
MSH5-201ENST00000375703 WDR5P61964 334 aaKnown RBP13.84□□□□□ -0.19
MSH5-201ENST00000375703 ZNF77Q15935 545 aa13.84□□□□□ -0.19
MSH5-201ENST00000375703 LCTLQ6UWM7 567 aa13.84□□□□□ -0.19
MSH5-201ENST00000375703 FAM92BQ6ZTR7 304 aa13.84□□□□□ -0.19
MSH5-201ENST00000375703 FAM129CQ86XR2 697 aa13.84□□□□□ -0.19
MSH5-201ENST00000375703 TM4SF18Q96CE8 201 aa13.84□□□□□ -0.19
MSH5-201ENST00000375703 TMEM80Q96HE8 168 aa13.84□□□□□ -0.19
MSH5-201ENST00000375703 TOX2Q96NM4 488 aa13.84□□□□□ -0.19
MSH5-201ENST00000375703 SLC30A2Q9BRI3 323 aa13.84□□□□□ -0.19
MSH5-201ENST00000375703 ASPNQ9BXN1 380 aa13.84□□□□□ -0.19
MSH5-201ENST00000375703 ABCG4Q9H172 646 aa13.84□□□□□ -0.19
MSH5-201ENST00000375703 DPEP2Q9H4A9 486 aa13.84□□□□□ -0.19
MSH5-201ENST00000375703 HHATLQ9HCP6 504 aa13.84□□□□□ -0.19
MSH5-201ENST00000375703 FZD3Q9NPG1 666 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms