RNA–Protein interactions for RNA: ENST00000375405.7

SCN1A-202, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,097 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-202ENST00000375405 ANKS1AQ92625 1134 aa4.48□□□□□ -1.69
SCN1A-202ENST00000375405 HOXB13Q92826 284 aaPredicted RBP4.48□□□□□ -1.69
SCN1A-202ENST00000375405 SGK494Q96LW2 274 aa4.48□□□□□ -1.69
SCN1A-202ENST00000375405 NDNQ99608 321 aa4.48□□□□□ -1.69
SCN1A-202ENST00000375405 EFCAB11Q9BUY7 163 aa4.48□□□□□ -1.69
SCN1A-202ENST00000375405 GPR62Q9BZJ7 368 aa4.48□□□□□ -1.69
SCN1A-202ENST00000375405 EDA2RQ9HAV5 297 aa4.48□□□□□ -1.69
SCN1A-202ENST00000375405 BEX1Q9HBH7 125 aa4.48□□□□□ -1.69
SCN1A-202ENST00000375405 ANKEF1Q9NU02 776 aa4.48□□□□□ -1.69
SCN1A-202ENST00000375405 STXBP5LQ9Y2K9 1186 aa4.48□□□□□ -1.69
SCN1A-202ENST00000375405 MRASO14807 208 aa4.48□□□□□ -1.69
SCN1A-202ENST00000375405 FSCN2O14926 492 aa4.48□□□□□ -1.69
SCN1A-202ENST00000375405 NDUFS4O43181 175 aa4.48□□□□□ -1.69
SCN1A-202ENST00000375405 COMTP21964 271 aa4.48□□□□□ -1.69
SCN1A-202ENST00000375405 EIF2DP41214 584 aaKnown RBP4.48□□□□□ -1.69
SCN1A-202ENST00000375405 CLCNKBP51801 687 aa4.48□□□□□ -1.69
SCN1A-202ENST00000375405 ZNF280AP59817 542 aaPredicted RBP4.48□□□□□ -1.69
SCN1A-202ENST00000375405 BEX3Q00994 111 aa4.48□□□□□ -1.69
SCN1A-202ENST00000375405 RNFT1Q5M7Z0 435 aa4.48□□□□□ -1.69
SCN1A-202ENST00000375405 STXBP5Q5T5C0 1151 aa4.48□□□□□ -1.69
SCN1A-202ENST00000375405 FAM205BPQ63HN1 556 aa4.48□□□□□ -1.69
SCN1A-202ENST00000375405 RAD9BQ6WBX8 426 aa4.48□□□□□ -1.69
SCN1A-202ENST00000375405 FBXW12Q6X9E4 464 aa4.48□□□□□ -1.69
SCN1A-202ENST00000375405 C3P1Q6ZMU1 363 aa4.48□□□□□ -1.69
SCN1A-202ENST00000375405 GPR142Q7Z601 462 aa4.48□□□□□ -1.69
SCN1A-202ENST00000375405 CCDC28AQ8IWP9 274 aa4.48□□□□□ -1.69
SCN1A-202ENST00000375405 FAM86B1Q8N7N1 296 aa4.48□□□□□ -1.69
SCN1A-202ENST00000375405 MAPK15Q8TD08 544 aa4.48□□□□□ -1.69
SCN1A-202ENST00000375405 APH1AQ96BI3 265 aa4.48□□□□□ -1.69
SCN1A-202ENST00000375405 NELL2Q99435 816 aa4.48□□□□□ -1.69
SCN1A-202ENST00000375405 RXFP1Q9HBX9 757 aa4.48□□□□□ -1.69
SCN1A-202ENST00000375405 RAPGEFL1Q9UHV5 662 aa4.48□□□□□ -1.69
SCN1A-202ENST00000375405 HSPB11Q9Y547 144 aa4.48□□□□□ -1.69
SCN1A-202ENST00000375405 PCDHGC4Q9Y5F7 938 aa4.48□□□□□ -1.69
SCN1A-202ENST00000375405 FADS2P1A8MWK0 482 aa4.48□□□□□ -1.69
SCN1A-202ENST00000375405 TMEM63AO94886 807 aa4.48□□□□□ -1.69
SCN1A-202ENST00000375405 H2BFMP0C1H6 154 aa4.48□□□□□ -1.69
SCN1A-202ENST00000375405 ADORA3P0DMS8 318 aa4.48□□□□□ -1.69
SCN1A-202ENST00000375405 HSD17B1P14061 328 aa4.48□□□□□ -1.69
SCN1A-202ENST00000375405 TBPP20226 339 aa4.48□□□□□ -1.69
SCN1A-202ENST00000375405 PRKACGP22612 351 aa4.48□□□□□ -1.69
SCN1A-202ENST00000375405 CCNFP41002 786 aa4.48□□□□□ -1.69
SCN1A-202ENST00000375405 TGM4P49221 684 aa4.48□□□□□ -1.69
SCN1A-202ENST00000375405 GPR85P60893 370 aa4.48□□□□□ -1.69
SCN1A-202ENST00000375405 PPATQ06203 517 aa4.48□□□□□ -1.69
SCN1A-202ENST00000375405 ZNF816Q0VGE8 651 aaPredicted RBP4.48□□□□□ -1.69
SCN1A-202ENST00000375405 SEMA5AQ13591 1074 aa4.48□□□□□ -1.69
SCN1A-202ENST00000375405 LIN52Q52LA3 116 aa4.48□□□□□ -1.69
SCN1A-202ENST00000375405 TMEM198Q66K66 360 aa4.48□□□□□ -1.69
SCN1A-202ENST00000375405 BRICD5Q6PL45 260 aa4.48□□□□□ -1.69
SCN1A-202ENST00000375405 SCGB1D4Q6XE38 83 aa4.48□□□□□ -1.69
SCN1A-202ENST00000375405 MEX3BQ6ZN04 569 aaKnown RBP4.48□□□□□ -1.69
SCN1A-202ENST00000375405 BBS12Q6ZW61 710 aa4.48□□□□□ -1.69
SCN1A-202ENST00000375405 ZNF765Q7L2R6 523 aa4.48□□□□□ -1.69
SCN1A-202ENST00000375405 MRPL21Q7Z2W9 205 aaKnown RBP4.48□□□□□ -1.69
SCN1A-202ENST00000375405 SAMD7Q7Z3H4 446 aa4.48□□□□□ -1.69
SCN1A-202ENST00000375405 FAM58AQ8N1B3 248 aa4.48□□□□□ -1.69
SCN1A-202ENST00000375405 GABRG1Q8N1C3 465 aa4.48□□□□□ -1.69
SCN1A-202ENST00000375405 UFD1Q92890 307 aa4.48□□□□□ -1.69
SCN1A-202ENST00000375405 SLAMF9Q96A28 289 aa4.48□□□□□ -1.69
SCN1A-202ENST00000375405 OSBPL5Q9H0X9 879 aaPredicted RBP4.48□□□□□ -1.69
SCN1A-202ENST00000375405 PDP2Q9P2J9 529 aa4.48□□□□□ -1.69
SCN1A-202ENST00000375405 DNPEPQ9ULA0 475 aa4.48□□□□□ -1.69
SCN1A-202ENST00000375405 ZNF443Q9Y2A4 671 aaPredicted RBP4.48□□□□□ -1.69
SCN1A-202ENST00000375405 MYH6P13533 1939 aa4.47□□□□□ -1.69
SCN1A-202ENST00000375405 A0A1W2PQ67 120 aa4.47□□□□□ -1.69
SCN1A-202ENST00000375405 OIP5O43482 229 aa4.47□□□□□ -1.69
SCN1A-202ENST00000375405 TPOP07202 933 aa4.47□□□□□ -1.69
SCN1A-202ENST00000375405 PEPDP12955 493 aa4.47□□□□□ -1.69
SCN1A-202ENST00000375405 RPS5P46782 204 aaKnown RBP4.47□□□□□ -1.69
SCN1A-202ENST00000375405 TTPAP49638 278 aa4.47□□□□□ -1.69
SCN1A-202ENST00000375405 CAV2P51636 162 aa4.47□□□□□ -1.69
SCN1A-202ENST00000375405 SLC18A2Q05940 514 aa4.47□□□□□ -1.69
SCN1A-202ENST00000375405 NECTIN1Q15223 517 aa4.47□□□□□ -1.69
SCN1A-202ENST00000375405 GPR107Q5VW38 600 aa4.47□□□□□ -1.69
SCN1A-202ENST00000375405 KYAT3Q6YP21 454 aaKnown RBP4.47□□□□□ -1.69
SCN1A-202ENST00000375405 GRASPQ7Z6J2 395 aaPredicted RBP4.47□□□□□ -1.69
SCN1A-202ENST00000375405 KIAA0907Q7Z7F0 614 aaPredicted RBP4.47□□□□□ -1.69
SCN1A-202ENST00000375405 ZNF687Q8N1G0 1237 aa4.47□□□□□ -1.69
SCN1A-202ENST00000375405 GATSQ8NAP1 163 aa4.47□□□□□ -1.69
SCN1A-202ENST00000375405 HELQQ8TDG4 1101 aa4.47□□□□□ -1.69
SCN1A-202ENST00000375405 RFFLQ8WZ73 363 aa4.47□□□□□ -1.69
SCN1A-202ENST00000375405 EBPLQ9BY08 206 aa4.47□□□□□ -1.69
SCN1A-202ENST00000375405 SHARPINQ9H0F6 387 aa4.47□□□□□ -1.69
SCN1A-202ENST00000375405 NMUR1Q9HB89 426 aa4.47□□□□□ -1.69
SCN1A-202ENST00000375405 TM7SF3Q9NS93 570 aa4.47□□□□□ -1.69
SCN1A-202ENST00000375405 SLC23A2Q9UGH3 650 aa4.47□□□□□ -1.69
SCN1A-202ENST00000375405 POLR3HQ9Y535 204 aaPredicted RBP4.47□□□□□ -1.69
SCN1A-202ENST00000375405 NCAPD2Q15021 1401 aa4.47□□□□□ -1.69
SCN1A-202ENST00000375405 LOXHD1Q8IVV2 1947 aa4.47□□□□□ -1.69
SCN1A-202ENST00000375405 ZNF785A8K8V0 405 aa4.47□□□□□ -1.69
SCN1A-202ENST00000375405 C1orf196B1AJZ1 125 aa4.47□□□□□ -1.69
SCN1A-202ENST00000375405 SCO2O43819 266 aa4.47□□□□□ -1.69
SCN1A-202ENST00000375405 SOX30O94993 753 aa4.47□□□□□ -1.69
SCN1A-202ENST00000375405 TMEM225BP0DP42 221 aa4.47□□□□□ -1.69
SCN1A-202ENST00000375405 KCNA6P17658 529 aa4.47□□□□□ -1.69
SCN1A-202ENST00000375405 EFNA1P20827 205 aaPredicted RBP4.47□□□□□ -1.69
SCN1A-202ENST00000375405 AOAHP28039 575 aa4.47□□□□□ -1.69
SCN1A-202ENST00000375405 SLC6A4P31645 630 aa4.47□□□□□ -1.69
SCN1A-202ENST00000375405 HOXD12P35452 270 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms