RNA–Protein interactions for RNA: ENST00000374877.7

CCDC40-203, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC40, Length 3,544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-203ENST00000374877 H3BN98 237 aa10.58□□□□□ -0.72
CCDC40-203ENST00000374877 TLR4O00206 839 aa10.58□□□□□ -0.72
CCDC40-203ENST00000374877 IGFBP1P08833 259 aaPredicted RBP10.58□□□□□ -0.72
CCDC40-203ENST00000374877 TSPAN19P0C672 248 aa10.58□□□□□ -0.72
CCDC40-203ENST00000374877 CSTF2P33240 577 aaKnown RBP eCLIP10.58□□□□□ -0.72
CCDC40-203ENST00000374877 CHI3L1P36222 383 aaPredicted RBP10.58□□□□□ -0.72
CCDC40-203ENST00000374877 RAE1P78406 368 aaKnown RBP10.58□□□□□ -0.72
CCDC40-203ENST00000374877 HOXC5Q00444 222 aa10.58□□□□□ -0.72
CCDC40-203ENST00000374877 CDK6Q00534 326 aa10.58□□□□□ -0.72
CCDC40-203ENST00000374877 HNRNPA0Q13151 305 aaKnown RBP10.58□□□□□ -0.72
CCDC40-203ENST00000374877 NAE1Q13564 534 aa10.58□□□□□ -0.72
CCDC40-203ENST00000374877 PYDC2Q56P42 97 aa10.58□□□□□ -0.72
CCDC40-203ENST00000374877 LIPJQ5W064 366 aa10.58□□□□□ -0.72
CCDC40-203ENST00000374877 ERAP2Q6P179 960 aa10.58□□□□□ -0.72
CCDC40-203ENST00000374877 SYCE2Q6PIF2 218 aa10.58□□□□□ -0.72
CCDC40-203ENST00000374877 PAQR6Q6TCH4 344 aa10.58□□□□□ -0.72
CCDC40-203ENST00000374877 CRTC1Q6UUV9 634 aa10.58□□□□□ -0.72
CCDC40-203ENST00000374877 BCDIN3DQ7Z5W3 292 aaKnown RBP10.58□□□□□ -0.72
CCDC40-203ENST00000374877 THOC6Q86W42 341 aaKnown RBP10.58□□□□□ -0.72
CCDC40-203ENST00000374877 WDR20Q8TBZ3 569 aa10.58□□□□□ -0.72
CCDC40-203ENST00000374877 RNF170Q96K19 258 aa10.58□□□□□ -0.72
CCDC40-203ENST00000374877 FRMD6Q96NE9 622 aa10.58□□□□□ -0.72
CCDC40-203ENST00000374877 NKX2-4Q9H2Z4 354 aa10.58□□□□□ -0.72
CCDC40-203ENST00000374877 SPATA6Q9NWH7 488 aaPredicted RBP10.58□□□□□ -0.72
CCDC40-203ENST00000374877 FTSJ1Q9UET6 329 aa10.58□□□□□ -0.72
CCDC40-203ENST00000374877 ENOPH1Q9UHY7 261 aa10.58□□□□□ -0.72
CCDC40-203ENST00000374877 STUB1Q9UNE7 303 aa10.58□□□□□ -0.72
CCDC40-203ENST00000374877 TRBC2A0A5B9 178 aa10.58□□□□□ -0.72
CCDC40-203ENST00000374877 ZNF670-ZNF695F2Z2N8 137 aa10.58□□□□□ -0.72
CCDC40-203ENST00000374877 CLEC2LP0C7M8 214 aa10.58□□□□□ -0.72
CCDC40-203ENST00000374877 SRCP12931 536 aa10.58□□□□□ -0.72
CCDC40-203ENST00000374877 CBLP22681 906 aa10.58□□□□□ -0.72
CCDC40-203ENST00000374877 HTR2BP41595 481 aa10.58□□□□□ -0.72
CCDC40-203ENST00000374877 CRYBB2P43320 205 aa10.58□□□□□ -0.72
CCDC40-203ENST00000374877 XCR1P46094 333 aa10.58□□□□□ -0.72
CCDC40-203ENST00000374877 RHAGQ02094 409 aa10.58□□□□□ -0.72
CCDC40-203ENST00000374877 TSTA3Q13630 321 aaPredicted RBP10.58□□□□□ -0.72
CCDC40-203ENST00000374877 LARS2Q15031 903 aaKnown RBP10.58□□□□□ -0.72
CCDC40-203ENST00000374877 YIF1BQ5BJH7 314 aa10.58□□□□□ -0.72
CCDC40-203ENST00000374877 RETSATQ6NUM9 610 aa10.58□□□□□ -0.72
CCDC40-203ENST00000374877 LYPD8Q6UX82 237 aa10.58□□□□□ -0.72
CCDC40-203ENST00000374877 PAMR1Q6UXH9 720 aa10.58□□□□□ -0.72
CCDC40-203ENST00000374877 VWA5B2Q8N398 1253 aa10.58□□□□□ -0.72
CCDC40-203ENST00000374877 KLHL6Q8WZ60 621 aa10.58□□□□□ -0.72
CCDC40-203ENST00000374877 NECTIN4Q96NY8 510 aa10.58□□□□□ -0.72
CCDC40-203ENST00000374877 CDCA3Q99618 268 aaPredicted RBP10.58□□□□□ -0.72
CCDC40-203ENST00000374877 THSD1Q9NS62 852 aa10.58□□□□□ -0.72
CCDC40-203ENST00000374877 TRAV19A0A0A6YYK7 116 aa10.58□□□□□ -0.72
CCDC40-203ENST00000374877 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.58□□□□□ -0.72
CCDC40-203ENST00000374877 A0A1W2PQL4 384 aaPredicted RBP10.58□□□□□ -0.72
CCDC40-203ENST00000374877 B4DXG7 233 aa10.58□□□□□ -0.72
CCDC40-203ENST00000374877 MYL12BO14950 172 aa10.58□□□□□ -0.72
CCDC40-203ENST00000374877 CCL16O15467 120 aa10.58□□□□□ -0.72
CCDC40-203ENST00000374877 TRAPPC2P0DI81 140 aa10.58□□□□□ -0.72
CCDC40-203ENST00000374877 TRAPPC2BP0DI82 140 aa10.58□□□□□ -0.72
CCDC40-203ENST00000374877 HOXD11P31277 338 aaPredicted RBP10.58□□□□□ -0.72
CCDC40-203ENST00000374877 PBX2P40425 430 aa10.58□□□□□ -0.72
CCDC40-203ENST00000374877 MVDP53602 400 aa10.58□□□□□ -0.72
CCDC40-203ENST00000374877 GPLD1P80108 840 aa10.58□□□□□ -0.72
CCDC40-203ENST00000374877 SMAD3P84022 425 aaKnown RBP10.58□□□□□ -0.72
CCDC40-203ENST00000374877 LRRC74AQ0VAA2 488 aa10.58□□□□□ -0.72
CCDC40-203ENST00000374877 QPRTQ15274 297 aa10.58□□□□□ -0.72
CCDC40-203ENST00000374877 NLRP8Q86W28 1048 aa10.58□□□□□ -0.72
CCDC40-203ENST00000374877 CHTF18Q8WVB6 975 aa10.58□□□□□ -0.72
CCDC40-203ENST00000374877 CIDECQ96AQ7 238 aaPredicted RBP10.58□□□□□ -0.72
CCDC40-203ENST00000374877 BRD9Q9H8M2 597 aa10.58□□□□□ -0.72
CCDC40-203ENST00000374877 CCDC88CQ9P219 2028 aa10.57□□□□□ -0.72
CCDC40-203ENST00000374877 ERVH48-1M5A8F1 160 aa10.57□□□□□ -0.72
CCDC40-203ENST00000374877 PLD2O14939 933 aa10.57□□□□□ -0.72
CCDC40-203ENST00000374877 TNFRSF21O75509 655 aa10.57□□□□□ -0.72
CCDC40-203ENST00000374877 CSF3P09919 207 aa10.57□□□□□ -0.72
CCDC40-203ENST00000374877 EPCAMP16422 314 aa10.57□□□□□ -0.72
CCDC40-203ENST00000374877 ALDH9A1P49189 494 aa10.57□□□□□ -0.72
CCDC40-203ENST00000374877 AP1S2P56377 157 aa10.57□□□□□ -0.72
CCDC40-203ENST00000374877 DUSP6Q16828 381 aa10.57□□□□□ -0.72
CCDC40-203ENST00000374877 DCAF4L2Q8NA75 395 aa10.57□□□□□ -0.72
CCDC40-203ENST00000374877 FOXJ1Q92949 421 aa10.57□□□□□ -0.72
CCDC40-203ENST00000374877 TMEM80Q96HE8 168 aa10.57□□□□□ -0.72
CCDC40-203ENST00000374877 RNF121Q9H920 327 aa10.57□□□□□ -0.72
CCDC40-203ENST00000374877 ENPP4Q9Y6X5 453 aa10.57□□□□□ -0.72
CCDC40-203ENST00000374877 SAP18O00422 153 aaKnown RBP10.57□□□□□ -0.72
CCDC40-203ENST00000374877 IFNW1P05000 195 aa10.57□□□□□ -0.72
CCDC40-203ENST00000374877 HBQ1P09105 142 aa10.57□□□□□ -0.72
CCDC40-203ENST00000374877 CCNYL3P0C7X3 344 aa10.57□□□□□ -0.72
CCDC40-203ENST00000374877 SERPINA4P29622 427 aa10.57□□□□□ -0.72
CCDC40-203ENST00000374877 IL12RB1P42701 662 aa10.57□□□□□ -0.72
CCDC40-203ENST00000374877 MC1RQ01726 317 aa10.57□□□□□ -0.72
CCDC40-203ENST00000374877 ASAH1Q13510 395 aa10.57□□□□□ -0.72
CCDC40-203ENST00000374877 C1DQ13901 141 aaKnown RBP10.57□□□□□ -0.72
CCDC40-203ENST00000374877 SMUG1Q53HV7 270 aa10.57□□□□□ -0.72
CCDC40-203ENST00000374877 ARHGAP15Q53QZ3 475 aa10.57□□□□□ -0.72
CCDC40-203ENST00000374877 C22orf42Q6IC83 251 aa10.57□□□□□ -0.72
CCDC40-203ENST00000374877 Q6ZNB5 142 aa10.57□□□□□ -0.72
CCDC40-203ENST00000374877 CBARPQ8N350 705 aaPredicted RBP10.57□□□□□ -0.72
CCDC40-203ENST00000374877 OR52N2Q8NGI0 321 aa10.57□□□□□ -0.72
CCDC40-203ENST00000374877 C2orf49Q9BVC5 232 aaPredicted RBP10.57□□□□□ -0.72
CCDC40-203ENST00000374877 MND1Q9BWT6 205 aa10.57□□□□□ -0.72
CCDC40-203ENST00000374877 OR51B4Q9Y5P0 310 aa10.57□□□□□ -0.72
CCDC40-203ENST00000374877 SNX11Q9Y5W9 270 aa10.57□□□□□ -0.72
CCDC40-203ENST00000374877 AP1M2Q9Y6Q5 423 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms