RNA–Protein interactions for RNA: ENST00000373997.7

A1CF-204, Transcript of APOBEC1 complementation factor, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene A1CF, Length 2,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
A1CF-204ENST00000373997 IGHV4-34P06331 123 aa12.65□□□□□ -0.38
A1CF-204ENST00000373997 NPPBP16860 134 aa12.65□□□□□ -0.38
A1CF-204ENST00000373997 IDSP22304 550 aa12.65□□□□□ -0.38
A1CF-204ENST00000373997 KRT20P35900 424 aa12.65□□□□□ -0.38
A1CF-204ENST00000373997 NCS1P62166 190 aa12.65□□□□□ -0.38
A1CF-204ENST00000373997 VLDLRP98155 873 aa12.65□□□□□ -0.38
A1CF-204ENST00000373997 NPRL3Q12980 569 aa12.65□□□□□ -0.38
A1CF-204ENST00000373997 CSTF3Q12996 717 aaKnown RBP12.65□□□□□ -0.38
A1CF-204ENST00000373997 DGCR6Q14129 220 aa12.65□□□□□ -0.38
A1CF-204ENST00000373997 LAPTM4AQ15012 233 aa12.65□□□□□ -0.38
A1CF-204ENST00000373997 PRAMEF14Q5SWL7 426 aa12.65□□□□□ -0.38
A1CF-204ENST00000373997 PRAMEF13Q5VWM6 474 aa12.65□□□□□ -0.38
A1CF-204ENST00000373997 TUBA3EQ6PEY2 450 aa12.65□□□□□ -0.38
A1CF-204ENST00000373997 PTOV1Q86YD1 416 aa12.65□□□□□ -0.38
A1CF-204ENST00000373997 FAM160A2Q8N612 972 aaPredicted RBP12.65□□□□□ -0.38
A1CF-204ENST00000373997 OR8J2Q8NGG1 315 aa12.65□□□□□ -0.38
A1CF-204ENST00000373997 RHOXF1Q8NHV9 184 aa12.65□□□□□ -0.38
A1CF-204ENST00000373997 SLC38A4Q969I6 547 aa12.65□□□□□ -0.38
A1CF-204ENST00000373997 METTL2AQ96IZ6 378 aaKnown RBP12.65□□□□□ -0.38
A1CF-204ENST00000373997 GABARAPL3Q9BY60 117 aa12.65□□□□□ -0.38
A1CF-204ENST00000373997 PRDM8Q9NQV8 689 aa12.65□□□□□ -0.38
A1CF-204ENST00000373997 THUMPD1Q9NXG2 353 aaKnown RBP12.65□□□□□ -0.38
A1CF-204ENST00000373997 TTC36A6NLP5 189 aa12.64□□□□□ -0.39
A1CF-204ENST00000373997 SCN2BO60939 215 aa12.64□□□□□ -0.39
A1CF-204ENST00000373997 LRATO95237 230 aa12.64□□□□□ -0.39
A1CF-204ENST00000373997 B3GALT4O96024 378 aa12.64□□□□□ -0.39
A1CF-204ENST00000373997 CD36P16671 472 aa12.64□□□□□ -0.39
A1CF-204ENST00000373997 PPIBP23284 216 aaKnown RBP12.64□□□□□ -0.39
A1CF-204ENST00000373997 AK4P27144 223 aaPredicted RBP12.64□□□□□ -0.39
A1CF-204ENST00000373997 ALDH4A1P30038 563 aa12.64□□□□□ -0.39
A1CF-204ENST00000373997 TGFBR2P37173 567 aa12.64□□□□□ -0.39
A1CF-204ENST00000373997 HNF4AP41235 474 aa12.64□□□□□ -0.39
A1CF-204ENST00000373997 PXNP49023 591 aaPredicted RBP12.64□□□□□ -0.39
A1CF-204ENST00000373997 LSM3P62310 102 aaKnown RBP12.64□□□□□ -0.39
A1CF-204ENST00000373997 RPP38P78345 283 aaKnown RBP12.64□□□□□ -0.39
A1CF-204ENST00000373997 MEF2AQ02078 507 aaPredicted RBP12.64□□□□□ -0.39
A1CF-204ENST00000373997 SLBPQ14493 270 aaKnown RBP eCLIP12.64□□□□□ -0.39
A1CF-204ENST00000373997 KRT33BQ14525 404 aa12.64□□□□□ -0.39
A1CF-204ENST00000373997 PUS10Q3MIT2 529 aaKnown RBP12.64□□□□□ -0.39
A1CF-204ENST00000373997 MLIPQ5VWP3 458 aa12.64□□□□□ -0.39
A1CF-204ENST00000373997 KIAA0895LQ68EN5 471 aa12.64□□□□□ -0.39
A1CF-204ENST00000373997 SLCO4C1Q6ZQN7 724 aa12.64□□□□□ -0.39
A1CF-204ENST00000373997 SYT12Q8IV01 421 aa12.64□□□□□ -0.39
A1CF-204ENST00000373997 CADM3Q8N126 398 aa12.64□□□□□ -0.39
A1CF-204ENST00000373997 SYNPOQ8N3V7 929 aa12.64□□□□□ -0.39
A1CF-204ENST00000373997 WDR20Q8TBZ3 569 aa12.64□□□□□ -0.39
A1CF-204ENST00000373997 ZHX1-C8orf76Q96EF9 292 aa12.64□□□□□ -0.39
A1CF-204ENST00000373997 SCARF2Q96GP6 870 aaPredicted RBP12.64□□□□□ -0.39
A1CF-204ENST00000373997 HRASLS5Q96KN8 279 aa12.64□□□□□ -0.39
A1CF-204ENST00000373997 EGLN2Q96KS0 407 aa12.64□□□□□ -0.39
A1CF-204ENST00000373997 ITPAQ9BY32 194 aa12.64□□□□□ -0.39
A1CF-204ENST00000373997 MMP27Q9H306 513 aa12.64□□□□□ -0.39
A1CF-204ENST00000373997 DSN1Q9H410 356 aa12.64□□□□□ -0.39
A1CF-204ENST00000373997 PNMA8BQ9ULN7 279 aaPredicted RBP12.64□□□□□ -0.39
A1CF-204ENST00000373997 MAPRE3Q9UPY8 281 aa12.64□□□□□ -0.39
A1CF-204ENST00000373997 CORO2BQ9UQ03 480 aa12.64□□□□□ -0.39
A1CF-204ENST00000373997 A3GALT2U3KPV4 340 aa12.64□□□□□ -0.39
A1CF-204ENST00000373997 MDC1Q14676 2089 aaKnown RBP12.64□□□□□ -0.39
A1CF-204ENST00000373997 SAGE2PA6NJ88 616 aa12.64□□□□□ -0.39
A1CF-204ENST00000373997 EFCAB9A8MZ26 197 aa12.64□□□□□ -0.39
A1CF-204ENST00000373997 KDM1AO60341 852 aa12.64□□□□□ -0.39
A1CF-204ENST00000373997 WBP4O75554 376 aaKnown RBP12.64□□□□□ -0.39
A1CF-204ENST00000373997 RASGRP1O95267 797 aa12.64□□□□□ -0.39
A1CF-204ENST00000373997 IGLV3-19P01714 112 aa12.64□□□□□ -0.39
A1CF-204ENST00000373997 HOXC4P09017 264 aaPredicted RBP12.64□□□□□ -0.39
A1CF-204ENST00000373997 PSMB5P28074 263 aa12.64□□□□□ -0.39
A1CF-204ENST00000373997 WNT3P56703 355 aa12.64□□□□□ -0.39
A1CF-204ENST00000373997 CDC20Q12834 499 aa12.64□□□□□ -0.39
A1CF-204ENST00000373997 FZD5Q13467 585 aa12.64□□□□□ -0.39
A1CF-204ENST00000373997 UGT8Q16880 541 aa12.64□□□□□ -0.39
A1CF-204ENST00000373997 TMEM236Q5W0B7 351 aa12.64□□□□□ -0.39
A1CF-204ENST00000373997 ZNF621Q6ZSS3 439 aa12.64□□□□□ -0.39
A1CF-204ENST00000373997 OR13H1Q8NG92 308 aa12.64□□□□□ -0.39
A1CF-204ENST00000373997 SLC5A11Q8WWX8 675 aa12.64□□□□□ -0.39
A1CF-204ENST00000373997 DACH2Q96NX9 599 aa12.64□□□□□ -0.39
A1CF-204ENST00000373997 XKR8Q9H6D3 395 aa12.64□□□□□ -0.39
A1CF-204ENST00000373997 SP140LQ9H930 580 aa12.64□□□□□ -0.39
A1CF-204ENST00000373997 CPNE5Q9HCH3 593 aa12.64□□□□□ -0.39
A1CF-204ENST00000373997 PLCXD1Q9NUJ7 323 aa12.64□□□□□ -0.39
A1CF-204ENST00000373997 TAC3Q9UHF0 121 aa12.64□□□□□ -0.39
A1CF-204ENST00000373997 PRAMEF33A0A0G2JMD5 474 aa12.63□□□□□ -0.39
A1CF-204ENST00000373997 PRR19A6NJB7 356 aa12.63□□□□□ -0.39
A1CF-204ENST00000373997 TAF4O00268 1085 aa12.63□□□□□ -0.39
A1CF-204ENST00000373997 STK25O00506 426 aa12.63□□□□□ -0.39
A1CF-204ENST00000373997 PI15O43692 258 aa12.63□□□□□ -0.39
A1CF-204ENST00000373997 APBB3O95704 486 aa12.63□□□□□ -0.39
A1CF-204ENST00000373997 COX7A2P14406 83 aa12.63□□□□□ -0.39
A1CF-204ENST00000373997 ZP2Q05996 745 aa12.63□□□□□ -0.39
A1CF-204ENST00000373997 TBCEQ15813 527 aaPredicted RBP12.63□□□□□ -0.39
A1CF-204ENST00000373997 SMN1Q16637 294 aaKnown RBP12.63□□□□□ -0.39
A1CF-204ENST00000373997 Q6ZSR6 202 aa12.63□□□□□ -0.39
A1CF-204ENST00000373997 PAGE2Q7Z2X7 111 aa12.63□□□□□ -0.39
A1CF-204ENST00000373997 VTCN1Q7Z7D3 282 aa12.63□□□□□ -0.39
A1CF-204ENST00000373997 CCDC71Q8IV32 467 aaPredicted RBP12.63□□□□□ -0.39
A1CF-204ENST00000373997 TMEM145Q8NBT3 493 aa12.63□□□□□ -0.39
A1CF-204ENST00000373997 CCL4L1Q8NHW4 92 aa12.63□□□□□ -0.39
A1CF-204ENST00000373997 MCFD2Q8NI22 146 aa12.63□□□□□ -0.39
A1CF-204ENST00000373997 EBPLQ9BY08 206 aa12.63□□□□□ -0.39
A1CF-204ENST00000373997 ALOXE3Q9BYJ1 711 aa12.63□□□□□ -0.39
A1CF-204ENST00000373997 SPNS1Q9H2V7 528 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms