RNA–Protein interactions for RNA: ENST00000373514.2

CDX4-201, Transcript of caudal type homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDX4, Length 1,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4-201ENST00000373514 TEX10Q9NXF1 929 aaPredicted RBP17.43■□□□□ 0.38
CDX4-201ENST00000373514 ITPR1Q14643 2758 aa17.42■□□□□ 0.38
CDX4-201ENST00000373514 TGFBR3LH3BV60 316 aa17.42■□□□□ 0.38
CDX4-201ENST00000373514 CYR61O00622 381 aa17.42■□□□□ 0.38
CDX4-201ENST00000373514 CHEK2O96017 543 aa17.42■□□□□ 0.38
CDX4-201ENST00000373514 CPN2P22792 545 aa17.42■□□□□ 0.38
CDX4-201ENST00000373514 MMP11P24347 488 aa17.42■□□□□ 0.38
CDX4-201ENST00000373514 ARFIP1P53367 373 aa17.42■□□□□ 0.38
CDX4-201ENST00000373514 EMP2P54851 167 aa17.42■□□□□ 0.38
CDX4-201ENST00000373514 MC1RQ01726 317 aa17.42■□□□□ 0.38
CDX4-201ENST00000373514 TNFRSF17Q02223 184 aa17.42■□□□□ 0.38
CDX4-201ENST00000373514 EEF1A2Q05639 463 aaKnown RBP17.42■□□□□ 0.38
CDX4-201ENST00000373514 CHAF1BQ13112 559 aa17.42■□□□□ 0.38
CDX4-201ENST00000373514 SSPNQ14714 243 aa17.42■□□□□ 0.38
CDX4-201ENST00000373514 DEFB109BQ30KR1 87 aa17.42■□□□□ 0.38
CDX4-201ENST00000373514 LSM12Q3MHD2 195 aaKnown RBP17.42■□□□□ 0.38
CDX4-201ENST00000373514 SPDYAQ5MJ70 313 aa17.42■□□□□ 0.38
CDX4-201ENST00000373514 CPZQ66K79 652 aa17.42■□□□□ 0.38
CDX4-201ENST00000373514 NXNQ6DKJ4 435 aa17.42■□□□□ 0.38
CDX4-201ENST00000373514 MRM1Q6IN84 353 aaKnown RBP17.42■□□□□ 0.38
CDX4-201ENST00000373514 Q6ZSR9 355 aa17.42■□□□□ 0.38
CDX4-201ENST00000373514 CCDC121Q6ZUS5 278 aa17.42■□□□□ 0.38
CDX4-201ENST00000373514 TRIM46Q7Z4K8 759 aa17.42■□□□□ 0.38
CDX4-201ENST00000373514 CLNKQ7Z7G1 428 aa17.42■□□□□ 0.38
CDX4-201ENST00000373514 RAB43Q86YS6 212 aa17.42■□□□□ 0.38
CDX4-201ENST00000373514 CHTF18Q8WVB6 975 aa17.42■□□□□ 0.38
CDX4-201ENST00000373514 UCN3Q969E3 161 aa17.42■□□□□ 0.38
CDX4-201ENST00000373514 C3orf30Q96M34 536 aa17.42■□□□□ 0.38
CDX4-201ENST00000373514 SEMA3GQ9NS98 782 aa17.42■□□□□ 0.38
CDX4-201ENST00000373514 ATG4BQ9Y4P1 393 aa17.42■□□□□ 0.38
CDX4-201ENST00000373514 ASB4Q9Y574 426 aa17.42■□□□□ 0.38
CDX4-201ENST00000373514 EPG5Q9HCE0 2579 aa17.42■□□□□ 0.38
CDX4-201ENST00000373514 MYOCOSA0A1B0GUC4 107 aa17.42■□□□□ 0.38
CDX4-201ENST00000373514 E9PBE3 544 aa17.42■□□□□ 0.38
CDX4-201ENST00000373514 KLHL41O60662 606 aa17.42■□□□□ 0.38
CDX4-201ENST00000373514 CCDC22O60826 627 aa17.42■□□□□ 0.38
CDX4-201ENST00000373514 UBOX5O94941 541 aa17.42■□□□□ 0.38
CDX4-201ENST00000373514 FAM58BPP0C7Q3 252 aa17.42■□□□□ 0.38
CDX4-201ENST00000373514 ACSM2AQ08AH3 577 aa17.42■□□□□ 0.38
CDX4-201ENST00000373514 XKR7Q5GH72 579 aa17.42■□□□□ 0.38
CDX4-201ENST00000373514 CCNYL2Q5T2Q4 361 aa17.42■□□□□ 0.38
CDX4-201ENST00000373514 ACSM2BQ68CK6 577 aa17.42■□□□□ 0.38
CDX4-201ENST00000373514 MMP21Q8N119 569 aa17.42■□□□□ 0.38
CDX4-201ENST00000373514 SNRNP27Q8WVK2 155 aaKnown RBP17.42■□□□□ 0.38
CDX4-201ENST00000373514 CLK4Q9HAZ1 481 aaKnown RBP17.42■□□□□ 0.38
CDX4-201ENST00000373514 NECTIN3Q9NQS3 549 aa17.42■□□□□ 0.38
CDX4-201ENST00000373514 AHSPQ9NZD4 102 aa17.42■□□□□ 0.38
CDX4-201ENST00000373514 POLR3HQ9Y535 204 aaPredicted RBP17.42■□□□□ 0.38
CDX4-201ENST00000373514 CROCCQ5TZA2 2017 aa17.41■□□□□ 0.38
CDX4-201ENST00000373514 DOCK10Q96BY6 2186 aa17.41■□□□□ 0.38
CDX4-201ENST00000373514 MGAQ8IWI9 3026 aa17.41■□□□□ 0.38
CDX4-201ENST00000373514 KMT2BQ9UMN6 2715 aaPredicted RBP17.41■□□□□ 0.38
CDX4-201ENST00000373514 IGHV3-20A0A0C4DH32 117 aa17.41■□□□□ 0.38
CDX4-201ENST00000373514 ATP6AP2A0A1C7CYW4 349 aa17.41■□□□□ 0.38
CDX4-201ENST00000373514 PCDH7O60245 1069 aa17.41■□□□□ 0.38
CDX4-201ENST00000373514 ATP6AP2O75787 350 aa17.41■□□□□ 0.38
CDX4-201ENST00000373514 RSL1D1O76021 490 aaKnown RBP17.41■□□□□ 0.38
CDX4-201ENST00000373514 AIFM1O95831 613 aa17.41■□□□□ 0.38
CDX4-201ENST00000373514 JAK1P23458 1154 aa17.41■□□□□ 0.38
CDX4-201ENST00000373514 TIA1P31483 386 aaKnown RBP eCLIP17.41■□□□□ 0.38
CDX4-201ENST00000373514 NR6A1Q15406 480 aa17.41■□□□□ 0.38
CDX4-201ENST00000373514 CRTC2Q53ET0 693 aaPredicted RBP17.41■□□□□ 0.38
CDX4-201ENST00000373514 RNF165Q6ZSG1 346 aa17.41■□□□□ 0.38
CDX4-201ENST00000373514 PAGE2Q7Z2X7 111 aa17.41■□□□□ 0.38
CDX4-201ENST00000373514 GPR180Q86V85 440 aa17.41■□□□□ 0.38
CDX4-201ENST00000373514 ACTRT2Q8TDY3 377 aa17.41■□□□□ 0.38
CDX4-201ENST00000373514 C11orf24Q96F05 449 aaPredicted RBP17.41■□□□□ 0.38
CDX4-201ENST00000373514 NMRK1Q9NWW6 199 aa17.41■□□□□ 0.38
CDX4-201ENST00000373514 LYARQ9NX58 379 aaKnown RBP17.41■□□□□ 0.38
CDX4-201ENST00000373514 P4HTMQ9NXG6 502 aa17.41■□□□□ 0.38
CDX4-201ENST00000373514 ADAM29Q9UKF5 820 aa17.41■□□□□ 0.38
CDX4-201ENST00000373514 MAN2B2Q9Y2E5 1009 aa17.41■□□□□ 0.38
CDX4-201ENST00000373514 CLDN16Q9Y5I7 305 aa17.41■□□□□ 0.38
CDX4-201ENST00000373514 TNRC6AQ8NDV7 1962 aaKnown RBP17.4■□□□□ 0.38
CDX4-201ENST00000373514 A0A1W2PR48 441 aa17.4■□□□□ 0.38
CDX4-201ENST00000373514 ARGFXA6NJG6 315 aa17.4■□□□□ 0.38
CDX4-201ENST00000373514 GLOD5A6NK44 160 aa17.4■□□□□ 0.38
CDX4-201ENST00000373514 WASHC1A8K0Z3 465 aa17.4■□□□□ 0.38
CDX4-201ENST00000373514 SLC28A1O00337 649 aa17.4■□□□□ 0.38
CDX4-201ENST00000373514 RGS14O43566 566 aa17.4■□□□□ 0.38
CDX4-201ENST00000373514 LDB3O75112 727 aa17.4■□□□□ 0.38
CDX4-201ENST00000373514 C8orf89P0DMQ9 161 aa17.4■□□□□ 0.38
CDX4-201ENST00000373514 NCF2P19878 526 aaPredicted RBP17.4■□□□□ 0.38
CDX4-201ENST00000373514 IL10P22301 178 aa17.4■□□□□ 0.38
CDX4-201ENST00000373514 MAPK12P53778 367 aa17.4■□□□□ 0.38
CDX4-201ENST00000373514 RPL38P63173 70 aaKnown RBP17.4■□□□□ 0.38
CDX4-201ENST00000373514 ID2Q02363 134 aa17.4■□□□□ 0.38
CDX4-201ENST00000373514 GALNTL6Q49A17 601 aa17.4■□□□□ 0.38
CDX4-201ENST00000373514 SPIN4Q56A73 249 aa17.4■□□□□ 0.38
CDX4-201ENST00000373514 METTL21CQ5VZV1 264 aa17.4■□□□□ 0.38
CDX4-201ENST00000373514 TMEM205Q6UW68 189 aa17.4■□□□□ 0.38
CDX4-201ENST00000373514 KIRREL2Q6UWL6 708 aa17.4■□□□□ 0.38
CDX4-201ENST00000373514 QSOX2Q6ZRP7 698 aa17.4■□□□□ 0.38
CDX4-201ENST00000373514 ANKRD37Q7Z713 158 aa17.4■□□□□ 0.38
CDX4-201ENST00000373514 SCUBE1Q8IWY4 988 aa17.4■□□□□ 0.38
CDX4-201ENST00000373514 OR11G2Q8NGC1 345 aa17.4■□□□□ 0.38
CDX4-201ENST00000373514 CEP70Q8NHQ1 597 aa17.4■□□□□ 0.38
CDX4-201ENST00000373514 ADAMTS18Q8TE60 1221 aa17.4■□□□□ 0.38
CDX4-201ENST00000373514 PTCHD1Q96NR3 888 aa17.4■□□□□ 0.38
CDX4-201ENST00000373514 SAR1AQ9NR31 198 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms