RNA–Protein interactions for RNA: ENST00000371447.3

PDE6C-201, Transcript of phosphodiesterase 6C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6C, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6C-201ENST00000371447 LAS2Q8IYD9 372 aa11.18□□□□□ -0.62
PDE6C-201ENST00000371447 SLC15A4Q8N697 577 aa11.18□□□□□ -0.62
PDE6C-201ENST00000371447 SETD9Q8NE22 299 aa11.18□□□□□ -0.62
PDE6C-201ENST00000371447 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.18□□□□□ -0.62
PDE6C-201ENST00000371447 TANKQ92844 425 aa11.18□□□□□ -0.62
PDE6C-201ENST00000371447 TM4SF18Q96CE8 201 aa11.18□□□□□ -0.62
PDE6C-201ENST00000371447 TEFMQ96QE5 360 aaKnown RBP11.18□□□□□ -0.62
PDE6C-201ENST00000371447 COPS4Q9BT78 406 aa11.18□□□□□ -0.62
PDE6C-201ENST00000371447 C1GALT1Q9NS00 363 aa11.18□□□□□ -0.62
PDE6C-201ENST00000371447 USE1Q9NZ43 259 aa11.18□□□□□ -0.62
PDE6C-201ENST00000371447 RABL2AQ9UBK7 228 aaPredicted RBP11.18□□□□□ -0.62
PDE6C-201ENST00000371447 CDH7Q9ULB5 785 aa11.18□□□□□ -0.62
PDE6C-201ENST00000371447 GPR34Q9UPC5 381 aa11.18□□□□□ -0.62
PDE6C-201ENST00000371447 TPRKBQ9Y3C4 175 aa11.18□□□□□ -0.62
PDE6C-201ENST00000371447 RWDD3Q9Y3V2 267 aa11.18□□□□□ -0.62
PDE6C-201ENST00000371447 PTPRSQ13332 1948 aa11.18□□□□□ -0.62
PDE6C-201ENST00000371447 A0A0J9YVX5 310 aa11.17□□□□□ -0.62
PDE6C-201ENST00000371447 KMOO15229 486 aa11.17□□□□□ -0.62
PDE6C-201ENST00000371447 RASGRP1O95267 797 aa11.17□□□□□ -0.62
PDE6C-201ENST00000371447 STSP08842 583 aa11.17□□□□□ -0.62
PDE6C-201ENST00000371447 DCKP27707 260 aa11.17□□□□□ -0.62
PDE6C-201ENST00000371447 MAGEA2P43356 314 aa11.17□□□□□ -0.62
PDE6C-201ENST00000371447 CCT3P49368 545 aaKnown RBP11.17□□□□□ -0.62
PDE6C-201ENST00000371447 CLK1P49759 484 aaKnown RBP11.17□□□□□ -0.62
PDE6C-201ENST00000371447 C21orf59P57076 290 aa11.17□□□□□ -0.62
PDE6C-201ENST00000371447 ERVK-21P61565 698 aa11.17□□□□□ -0.62
PDE6C-201ENST00000371447 ATAT1Q5SQI0 421 aa11.17□□□□□ -0.62
PDE6C-201ENST00000371447 ENTHD1Q8IYW4 607 aa11.17□□□□□ -0.62
PDE6C-201ENST00000371447 OR52E1Q8NGJ3 308 aa11.17□□□□□ -0.62
PDE6C-201ENST00000371447 KAT2AQ92830 837 aa11.17□□□□□ -0.62
PDE6C-201ENST00000371447 CAMK1GQ96NX5 476 aa11.17□□□□□ -0.62
PDE6C-201ENST00000371447 SLC17A9Q9BYT1 436 aa11.17□□□□□ -0.62
PDE6C-201ENST00000371447 EHD1Q9H4M9 534 aa11.17□□□□□ -0.62
PDE6C-201ENST00000371447 RNF167Q9H6Y7 350 aa11.17□□□□□ -0.62
PDE6C-201ENST00000371447 FGF22Q9HCT0 170 aa11.17□□□□□ -0.62
PDE6C-201ENST00000371447 MRPS30Q9NP92 439 aaKnown RBP11.17□□□□□ -0.62
PDE6C-201ENST00000371447 TIMMDC1Q9NPL8 285 aa11.17□□□□□ -0.62
PDE6C-201ENST00000371447 PCDHGA10Q9Y5H3 936 aa11.17□□□□□ -0.62
PDE6C-201ENST00000371447 HEATR5BQ9P2D3 2071 aa11.17□□□□□ -0.62
PDE6C-201ENST00000371447 ANHXE9PGG2 379 aa11.17□□□□□ -0.62
PDE6C-201ENST00000371447 RNGTTO60942 597 aaKnown RBP11.17□□□□□ -0.62
PDE6C-201ENST00000371447 TNFRSF21O75509 655 aa11.17□□□□□ -0.62
PDE6C-201ENST00000371447 NADKO95544 446 aaPredicted RBP11.17□□□□□ -0.62
PDE6C-201ENST00000371447 GSTM2P28161 218 aa11.17□□□□□ -0.62
PDE6C-201ENST00000371447 PCGF2P35227 344 aa11.17□□□□□ -0.62
PDE6C-201ENST00000371447 ITGA1P56199 1179 aa11.17□□□□□ -0.62
PDE6C-201ENST00000371447 DPTQ07507 201 aa11.17□□□□□ -0.62
PDE6C-201ENST00000371447 SLAMF1Q13291 335 aa11.17□□□□□ -0.62
PDE6C-201ENST00000371447 VEZF1Q14119 521 aa11.17□□□□□ -0.62
PDE6C-201ENST00000371447 HEPACAMQ14CZ8 416 aa11.17□□□□□ -0.62
PDE6C-201ENST00000371447 MAD2L1BPQ15013 274 aaPredicted RBP11.17□□□□□ -0.62
PDE6C-201ENST00000371447 DUSP6Q16828 381 aa11.17□□□□□ -0.62
PDE6C-201ENST00000371447 RFX4Q33E94 735 aa11.17□□□□□ -0.62
PDE6C-201ENST00000371447 ITPRIPL2Q3MIP1 535 aa11.17□□□□□ -0.62
PDE6C-201ENST00000371447 SYCE2Q6PIF2 218 aa11.17□□□□□ -0.62
PDE6C-201ENST00000371447 RNF165Q6ZSG1 346 aa11.17□□□□□ -0.62
PDE6C-201ENST00000371447 TBC1D15Q8TC07 691 aa11.17□□□□□ -0.62
PDE6C-201ENST00000371447 PHOSPHO2Q8TCD6 241 aa11.17□□□□□ -0.62
PDE6C-201ENST00000371447 PATE1Q8WXA2 126 aa11.17□□□□□ -0.62
PDE6C-201ENST00000371447 UBE2E3Q969T4 207 aa11.17□□□□□ -0.62
PDE6C-201ENST00000371447 PDXPQ96GD0 296 aa11.17□□□□□ -0.62
PDE6C-201ENST00000371447 SEC14L3Q9UDX4 400 aa11.17□□□□□ -0.62
PDE6C-201ENST00000371447 PSME2Q9UL46 239 aa11.17□□□□□ -0.62
PDE6C-201ENST00000371447 RNF6Q9Y252 685 aa11.17□□□□□ -0.62
PDE6C-201ENST00000371447 ANGPT4Q9Y264 503 aa11.17□□□□□ -0.62
PDE6C-201ENST00000371447 CACNA1IQ9P0X4 2223 aa11.17□□□□□ -0.62
PDE6C-201ENST00000371447 TRIOBPQ9H2D6 2365 aa11.17□□□□□ -0.62
PDE6C-201ENST00000371447 PLXND1Q9Y4D7 1925 aa11.17□□□□□ -0.62
PDE6C-201ENST00000371447 TRBV4-1A0A0J9YWV2 114 aa11.17□□□□□ -0.62
PDE6C-201ENST00000371447 TMEM229AB2RXF0 380 aa11.17□□□□□ -0.62
PDE6C-201ENST00000371447 FOXE1O00358 373 aaPredicted RBP11.17□□□□□ -0.62
PDE6C-201ENST00000371447 BTN3A3O00478 584 aa11.17□□□□□ -0.62
PDE6C-201ENST00000371447 CAPN5O15484 640 aaPredicted RBP11.17□□□□□ -0.62
PDE6C-201ENST00000371447 KLF8O95600 359 aaPredicted RBP11.17□□□□□ -0.62
PDE6C-201ENST00000371447 HOXB2P14652 356 aa11.17□□□□□ -0.62
PDE6C-201ENST00000371447 CERS1P27544 350 aa11.17□□□□□ -0.62
PDE6C-201ENST00000371447 CRISP3P54108 245 aa11.17□□□□□ -0.62
PDE6C-201ENST00000371447 TEAD4Q15561 434 aa11.17□□□□□ -0.62
PDE6C-201ENST00000371447 TMEM52BQ4KMG9 183 aa11.17□□□□□ -0.62
PDE6C-201ENST00000371447 GPAT3Q53EU6 434 aa11.17□□□□□ -0.62
PDE6C-201ENST00000371447 STX19Q8N4C7 294 aa11.17□□□□□ -0.62
PDE6C-201ENST00000371447 KCT2Q8NC54 265 aa11.17□□□□□ -0.62
PDE6C-201ENST00000371447 FAR1Q8WVX9 515 aa11.17□□□□□ -0.62
PDE6C-201ENST00000371447 C16orf58Q96GQ5 468 aa11.17□□□□□ -0.62
PDE6C-201ENST00000371447 ZNF300Q96RE9 604 aaPredicted RBP11.17□□□□□ -0.62
PDE6C-201ENST00000371447 ALOXE3Q9BYJ1 711 aa11.17□□□□□ -0.62
PDE6C-201ENST00000371447 ATP6V1HQ9UI12 483 aa11.17□□□□□ -0.62
PDE6C-201ENST00000371447 C17orf113A0A1B0GUU1 675 aa11.16□□□□□ -0.62
PDE6C-201ENST00000371447 HAT1O14929 419 aa11.16□□□□□ -0.62
PDE6C-201ENST00000371447 B4GALT2O60909 372 aa11.16□□□□□ -0.62
PDE6C-201ENST00000371447 IFNW1P05000 195 aa11.16□□□□□ -0.62
PDE6C-201ENST00000371447 PPIBP23284 216 aaKnown RBP11.16□□□□□ -0.62
PDE6C-201ENST00000371447 ACTR1BP42025 376 aa11.16□□□□□ -0.62
PDE6C-201ENST00000371447 ACTR1AP61163 376 aa11.16□□□□□ -0.62
PDE6C-201ENST00000371447 RPS3AP61247 264 aaKnown RBP11.16□□□□□ -0.62
PDE6C-201ENST00000371447 SNRPNP63162 240 aaKnown RBP11.16□□□□□ -0.62
PDE6C-201ENST00000371447 CSNK1G2P78368 415 aa11.16□□□□□ -0.62
PDE6C-201ENST00000371447 NR1D2Q14995 579 aa11.16□□□□□ -0.62
PDE6C-201ENST00000371447 ZNF658BQ4V348 819 aaPredicted RBP11.16□□□□□ -0.62
PDE6C-201ENST00000371447 TMEM107Q6UX40 140 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms