RNA–Protein interactions for RNA: ENST00000371320.7

SSBP3-204, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP3, Length 2,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-204ENST00000371320 GTPBP3Q969Y2 492 aaKnown RBP27.5■■□□□ 1.99
SSBP3-204ENST00000371320 ZBED6CLQ96FA7 236 aaPredicted RBP27.5■■□□□ 1.99
SSBP3-204ENST00000371320 RHCGQ9UBD6 479 aa27.5■■□□□ 1.99
SSBP3-204ENST00000371320 ADAM29Q9UKF5 820 aa27.5■■□□□ 1.99
SSBP3-204ENST00000371320 LATO43561 262 aa27.5■■□□□ 1.99
SSBP3-204ENST00000371320 RECKO95980 971 aa27.5■■□□□ 1.99
SSBP3-204ENST00000371320 EN2P19622 333 aaPredicted RBP27.5■■□□□ 1.99
SSBP3-204ENST00000371320 OPRL1P41146 370 aa27.5■■□□□ 1.99
SSBP3-204ENST00000371320 EIF2DP41214 584 aaKnown RBP27.5■■□□□ 1.99
SSBP3-204ENST00000371320 FRKP42685 505 aaPredicted RBP27.5■■□□□ 1.99
SSBP3-204ENST00000371320 FGL2Q14314 439 aa27.5■■□□□ 1.99
SSBP3-204ENST00000371320 NR1D2Q14995 579 aa27.5■■□□□ 1.99
SSBP3-204ENST00000371320 NUDT18Q6ZVK8 323 aa27.5■■□□□ 1.99
SSBP3-204ENST00000371320 DNAJC22Q8N4W6 341 aa27.5■■□□□ 1.99
SSBP3-204ENST00000371320 TMEM19Q96HH6 336 aa27.5■■□□□ 1.99
SSBP3-204ENST00000371320 PSD2Q9BQI7 771 aa27.5■■□□□ 1.99
SSBP3-204ENST00000371320 XKR8Q9H6D3 395 aa27.5■■□□□ 1.99
SSBP3-204ENST00000371320 SIRT3Q9NTG7 399 aaPredicted RBP27.5■■□□□ 1.99
SSBP3-204ENST00000371320 IMP3Q9NV31 184 aaKnown RBP27.5■■□□□ 1.99
SSBP3-204ENST00000371320 TEX10Q9NXF1 929 aaPredicted RBP27.5■■□□□ 1.99
SSBP3-204ENST00000371320 ZFR2Q9UPR6 939 aaKnown RBP27.5■■□□□ 1.99
SSBP3-204ENST00000371320 CDH23Q9H251 3354 aa27.5■■□□□ 1.99
SSBP3-204ENST00000371320 ZNF12P17014 697 aa27.49■■□□□ 1.99
SSBP3-204ENST00000371320 FUT4P22083 530 aa27.49■■□□□ 1.99
SSBP3-204ENST00000371320 TEAD1P28347 426 aa27.49■■□□□ 1.99
SSBP3-204ENST00000371320 GSTM5P46439 218 aa27.49■■□□□ 1.99
SSBP3-204ENST00000371320 PUM1Q14671 1186 aaKnown RBP eCLIP27.49■■□□□ 1.99
SSBP3-204ENST00000371320 FCGR1BQ92637 280 aa27.49■■□□□ 1.99
SSBP3-204ENST00000371320 RAB8BQ92930 207 aa27.49■■□□□ 1.99
SSBP3-204ENST00000371320 CAMK1GQ96NX5 476 aa27.49■■□□□ 1.99
SSBP3-204ENST00000371320 ALPK1Q96QP1 1244 aa27.49■■□□□ 1.99
SSBP3-204ENST00000371320 AMBNQ9NP70 447 aa27.49■■□□□ 1.99
SSBP3-204ENST00000371320 ZNF226Q9NYT6 803 aa27.49■■□□□ 1.99
SSBP3-204ENST00000371320 KCNK6Q9Y257 313 aa27.49■■□□□ 1.99
SSBP3-204ENST00000371320 CLCA1A8K7I4 914 aa27.48■■□□□ 1.99
SSBP3-204ENST00000371320 PRDX1Q06830 199 aaKnown RBP27.48■■□□□ 1.99
SSBP3-204ENST00000371320 OR4C11Q6IEV9 310 aa27.48■■□□□ 1.99
SSBP3-204ENST00000371320 KIAA1161Q6NSJ0 714 aa27.48■■□□□ 1.99
SSBP3-204ENST00000371320 TAGAPQ8N103 731 aa27.48■■□□□ 1.99
SSBP3-204ENST00000371320 TP53I13Q8NBR0 393 aaPredicted RBP27.48■■□□□ 1.99
SSBP3-204ENST00000371320 DENND6BQ8NEG7 585 aa27.48■■□□□ 1.99
SSBP3-204ENST00000371320 PROX1Q92786 737 aa27.48■■□□□ 1.99
SSBP3-204ENST00000371320 SH3YL1Q96HL8 342 aaPredicted RBP27.48■■□□□ 1.99
SSBP3-204ENST00000371320 DDX31Q9H8H2 851 aaKnown RBP27.48■■□□□ 1.99
SSBP3-204ENST00000371320 RHBDL2Q9NX52 303 aa27.48■■□□□ 1.99
SSBP3-204ENST00000371320 IMPAD1Q9NX62 359 aa27.48■■□□□ 1.99
SSBP3-204ENST00000371320 SNX11Q9Y5W9 270 aa27.48■■□□□ 1.99
SSBP3-204ENST00000371320 PLXND1Q9Y4D7 1925 aa27.48■■□□□ 1.99
SSBP3-204ENST00000371320 A0A0G2JN53 185 aa27.48■■□□□ 1.99
SSBP3-204ENST00000371320 B4GALT2O60909 372 aa27.48■■□□□ 1.99
SSBP3-204ENST00000371320 CD36P16671 472 aa27.48■■□□□ 1.99
SSBP3-204ENST00000371320 CBLP22681 906 aa27.48■■□□□ 1.99
SSBP3-204ENST00000371320 C21orf33P30042 268 aaPredicted RBP27.48■■□□□ 1.99
SSBP3-204ENST00000371320 RAB28P51157 221 aa27.48■■□□□ 1.99
SSBP3-204ENST00000371320 C2orf27AQ580R0 203 aa27.48■■□□□ 1.99
SSBP3-204ENST00000371320 ZNF513Q8N8E2 541 aaPredicted RBP27.48■■□□□ 1.99
SSBP3-204ENST00000371320 AQP11Q8NBQ7 271 aa27.48■■□□□ 1.99
SSBP3-204ENST00000371320 GGHQ92820 318 aa27.48■■□□□ 1.99
SSBP3-204ENST00000371320 ZNF764Q96H86 408 aaPredicted RBP27.48■■□□□ 1.99
SSBP3-204ENST00000371320 IGFLR1Q9H665 355 aa27.48■■□□□ 1.99
SSBP3-204ENST00000371320 ENOPH1Q9UHY7 261 aa27.48■■□□□ 1.99
SSBP3-204ENST00000371320 KIF26AQ9ULI4 1882 aaPredicted RBP27.48■■□□□ 1.99
SSBP3-204ENST00000371320 PRR23AA6NEV1 266 aa27.47■■□□□ 1.99
SSBP3-204ENST00000371320 CLEC3AO75596 197 aa27.47■■□□□ 1.99
SSBP3-204ENST00000371320 ENPP2Q13822 863 aa27.47■■□□□ 1.99
SSBP3-204ENST00000371320 DGUOKQ16854 277 aa27.47■■□□□ 1.99
SSBP3-204ENST00000371320 AMER3Q8N944 861 aa27.47■■□□□ 1.99
SSBP3-204ENST00000371320 ITPAQ9BY32 194 aa27.47■■□□□ 1.99
SSBP3-204ENST00000371320 FAIMQ9NVQ4 179 aa27.47■■□□□ 1.99
SSBP3-204ENST00000371320 ZBTB32Q9Y2Y4 487 aaPredicted RBP27.47■■□□□ 1.99
SSBP3-204ENST00000371320 IGKV1-8A0A0C4DH67 115 aa27.47■■□□□ 1.99
SSBP3-204ENST00000371320 SLC19A1P41440 591 aa27.47■■□□□ 1.99
SSBP3-204ENST00000371320 CCT3P49368 545 aaKnown RBP27.47■■□□□ 1.99
SSBP3-204ENST00000371320 TEKQ02763 1124 aa27.47■■□□□ 1.99
SSBP3-204ENST00000371320 SGCGQ13326 291 aa27.47■■□□□ 1.99
SSBP3-204ENST00000371320 KRT33BQ14525 404 aa27.47■■□□□ 1.99
SSBP3-204ENST00000371320 TMCO5AQ8N6Q1 288 aa27.47■■□□□ 1.99
SSBP3-204ENST00000371320 OR2A1Q8NGT9 310 aa27.47■■□□□ 1.99
SSBP3-204ENST00000371320 APOBEC4Q8WW27 367 aaKnown RBP27.47■■□□□ 1.99
SSBP3-204ENST00000371320 KXD1Q9BQD3 176 aa27.47■■□□□ 1.99
SSBP3-204ENST00000371320 ACSS1Q9NUB1 689 aaPredicted RBP27.47■■□□□ 1.99
SSBP3-204ENST00000371320 SELENONQ9NZV5 590 aa27.47■■□□□ 1.99
SSBP3-204ENST00000371320 KCND3Q9UK17 655 aa27.47■■□□□ 1.99
SSBP3-204ENST00000371320 DUSP12Q9UNI6 340 aa27.47■■□□□ 1.99
SSBP3-204ENST00000371320 ARRDC5A6NEK1 342 aa27.46■■□□□ 1.99
SSBP3-204ENST00000371320 CLDN25C9JDP6 229 aa27.46■■□□□ 1.99
SSBP3-204ENST00000371320 HMGN4O00479 90 aa27.46■■□□□ 1.99
SSBP3-204ENST00000371320 TOR1BO14657 336 aa27.46■■□□□ 1.99
SSBP3-204ENST00000371320 PDE9AO76083 593 aa27.46■■□□□ 1.99
SSBP3-204ENST00000371320 MFN2O95140 757 aa27.46■■□□□ 1.99
SSBP3-204ENST00000371320 NADKO95544 446 aaPredicted RBP27.46■■□□□ 1.99
SSBP3-204ENST00000371320 CDK1P06493 297 aa27.46■■□□□ 1.99
SSBP3-204ENST00000371320 GABRB1P18505 474 aa27.46■■□□□ 1.99
SSBP3-204ENST00000371320 TGFBR2P37173 567 aa27.46■■□□□ 1.99
SSBP3-204ENST00000371320 SSR2P43308 183 aa27.46■■□□□ 1.99
SSBP3-204ENST00000371320 NUDT6P53370 316 aa27.46■■□□□ 1.99
SSBP3-204ENST00000371320 NCS1P62166 190 aa27.46■■□□□ 1.99
SSBP3-204ENST00000371320 TP53BP2Q13625 1128 aa27.46■■□□□ 1.99
SSBP3-204ENST00000371320 ZNF846Q147U1 533 aa27.46■■□□□ 1.99
SSBP3-204ENST00000371320 COLEC12Q5KU26 742 aa27.46■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms