RNA–Protein interactions for RNA: ENST00000370496.3

COL9A1-204, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 1,372 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-204ENST00000370496 BTBD16Q32M84 506 aa13.92□□□□□ -0.18
COL9A1-204ENST00000370496 C18orf63Q68DL7 685 aa13.92□□□□□ -0.18
COL9A1-204ENST00000370496 OR52E8Q6IFG1 317 aa13.92□□□□□ -0.18
COL9A1-204ENST00000370496 MRM1Q6IN84 353 aaKnown RBP13.92□□□□□ -0.18
COL9A1-204ENST00000370496 TRIM46Q7Z4K8 759 aa13.92□□□□□ -0.18
COL9A1-204ENST00000370496 KBTBD2Q8IY47 623 aa13.92□□□□□ -0.18
COL9A1-204ENST00000370496 CLYBLQ8N0X4 340 aa13.92□□□□□ -0.18
COL9A1-204ENST00000370496 OR6Y1Q8NGX8 325 aa13.92□□□□□ -0.18
COL9A1-204ENST00000370496 CDC26Q8NHZ8 85 aa13.92□□□□□ -0.18
COL9A1-204ENST00000370496 APIPQ96GX9 242 aa13.92□□□□□ -0.18
COL9A1-204ENST00000370496 THOC3Q96J01 351 aaKnown RBP13.92□□□□□ -0.18
COL9A1-204ENST00000370496 EBPLQ9BY08 206 aa13.92□□□□□ -0.18
COL9A1-204ENST00000370496 TEX10Q9NXF1 929 aaPredicted RBP13.92□□□□□ -0.18
COL9A1-204ENST00000370496 MCM8Q9UJA3 840 aa13.92□□□□□ -0.18
COL9A1-204ENST00000370496 ASB4Q9Y574 426 aa13.92□□□□□ -0.18
COL9A1-204ENST00000370496 DNAJC15Q9Y5T4 150 aa13.92□□□□□ -0.18
COL9A1-204ENST00000370496 GLOD5A6NK44 160 aa13.91□□□□□ -0.18
COL9A1-204ENST00000370496 PIP5K1BO14986 540 aa13.91□□□□□ -0.18
COL9A1-204ENST00000370496 PROM1O43490 865 aa13.91□□□□□ -0.18
COL9A1-204ENST00000370496 CTNSO60931 367 aa13.91□□□□□ -0.18
COL9A1-204ENST00000370496 MYO1DO94832 1006 aa13.91□□□□□ -0.18
COL9A1-204ENST00000370496 SNUPNO95149 360 aaKnown RBP13.91□□□□□ -0.18
COL9A1-204ENST00000370496 IFNA16P05015 189 aa13.91□□□□□ -0.18
COL9A1-204ENST00000370496 ALPPP05187 535 aa13.91□□□□□ -0.18
COL9A1-204ENST00000370496 FGF4P08620 206 aa13.91□□□□□ -0.18
COL9A1-204ENST00000370496 PGDP52209 483 aa13.91□□□□□ -0.18
COL9A1-204ENST00000370496 ID2Q02363 134 aa13.91□□□□□ -0.18
COL9A1-204ENST00000370496 EXT1Q16394 746 aa13.91□□□□□ -0.18
COL9A1-204ENST00000370496 LACTB2Q53H82 288 aaPredicted RBP13.91□□□□□ -0.18
COL9A1-204ENST00000370496 NDUFAF5Q5TEU4 345 aa13.91□□□□□ -0.18
COL9A1-204ENST00000370496 CES4AQ5XG92 561 aa13.91□□□□□ -0.18
COL9A1-204ENST00000370496 PCSK4Q6UW60 755 aa13.91□□□□□ -0.18
COL9A1-204ENST00000370496 RNF165Q6ZSG1 346 aa13.91□□□□□ -0.18
COL9A1-204ENST00000370496 TRIM42Q8IWZ5 723 aa13.91□□□□□ -0.18
COL9A1-204ENST00000370496 EXD3Q8N9H8 876 aa13.91□□□□□ -0.18
COL9A1-204ENST00000370496 FDCSPQ8NFU4 85 aa13.91□□□□□ -0.18
COL9A1-204ENST00000370496 CHTF18Q8WVB6 975 aa13.91□□□□□ -0.18
COL9A1-204ENST00000370496 ABHD17AQ96GS6 310 aa13.91□□□□□ -0.18
COL9A1-204ENST00000370496 ADAP2Q9NPF8 381 aa13.91□□□□□ -0.18
COL9A1-204ENST00000370496 PNO1Q9NRX1 252 aaKnown RBP13.91□□□□□ -0.18
COL9A1-204ENST00000370496 ZNF446Q9NWS9 450 aa13.91□□□□□ -0.18
COL9A1-204ENST00000370496 RALYQ9UKM9 306 aaKnown RBP13.91□□□□□ -0.18
COL9A1-204ENST00000370496 PCDHGA9Q9Y5G4 932 aaKnown RBP13.91□□□□□ -0.18
COL9A1-204ENST00000370496 ZFYVE26Q68DK2 2539 aa13.91□□□□□ -0.18
COL9A1-204ENST00000370496 MED13Q9UHV7 2174 aa13.9□□□□□ -0.18
COL9A1-204ENST00000370496 FAM208BQ5VWN6 2430 aa13.9□□□□□ -0.18
COL9A1-204ENST00000370496 A0A1W2PR48 441 aa13.9□□□□□ -0.18
COL9A1-204ENST00000370496 SAGE2PA6NJ88 616 aa13.9□□□□□ -0.18
COL9A1-204ENST00000370496 EIF4E1BA6NMX2 242 aaKnown RBP13.9□□□□□ -0.18
COL9A1-204ENST00000370496 A8MUA0 341 aa13.9□□□□□ -0.18
COL9A1-204ENST00000370496 TGFBR3LH3BV60 316 aa13.9□□□□□ -0.18
COL9A1-204ENST00000370496 ITM2AO43736 263 aa13.9□□□□□ -0.18
COL9A1-204ENST00000370496 FGF17O60258 216 aa13.9□□□□□ -0.18
COL9A1-204ENST00000370496 KLHL41O60662 606 aa13.9□□□□□ -0.18
COL9A1-204ENST00000370496 CEACAM4O75871 244 aa13.9□□□□□ -0.18
COL9A1-204ENST00000370496 LINC00032P0C843 101 aa13.9□□□□□ -0.18
COL9A1-204ENST00000370496 PRR35P0CG20 571 aa13.9□□□□□ -0.18
COL9A1-204ENST00000370496 ICAM2P13598 275 aa13.9□□□□□ -0.18
COL9A1-204ENST00000370496 PLIN5Q00G26 463 aa13.9□□□□□ -0.18
COL9A1-204ENST00000370496 FOLH1Q04609 750 aa13.9□□□□□ -0.18
COL9A1-204ENST00000370496 BST1Q10588 318 aa13.9□□□□□ -0.18
COL9A1-204ENST00000370496 SERTAD2Q14140 314 aa13.9□□□□□ -0.18
COL9A1-204ENST00000370496 MYBPC3Q14896 1274 aa13.9□□□□□ -0.18
COL9A1-204ENST00000370496 PDCD2Q16342 344 aaPredicted RBP13.9□□□□□ -0.18
COL9A1-204ENST00000370496 ATG16L1Q676U5 607 aa13.9□□□□□ -0.18
COL9A1-204ENST00000370496 RIPOR1Q6ZS17 1223 aa13.9□□□□□ -0.18
COL9A1-204ENST00000370496 KIRREL3Q8IZU9 778 aa13.9□□□□□ -0.18
COL9A1-204ENST00000370496 ZNF781Q8N8C0 355 aa13.9□□□□□ -0.18
COL9A1-204ENST00000370496 RAB3IL1Q8TBN0 382 aa13.9□□□□□ -0.18
COL9A1-204ENST00000370496 DYDC1Q8WWB3 177 aa13.9□□□□□ -0.18
COL9A1-204ENST00000370496 TANKQ92844 425 aa13.9□□□□□ -0.18
COL9A1-204ENST00000370496 WDR77Q9BQA1 342 aaPredicted RBP13.9□□□□□ -0.18
COL9A1-204ENST00000370496 NUDT9Q9BW91 350 aa13.9□□□□□ -0.18
COL9A1-204ENST00000370496 FAIM2Q9BWQ8 316 aa13.9□□□□□ -0.18
COL9A1-204ENST00000370496 LHPPQ9H008 270 aa13.9□□□□□ -0.18
COL9A1-204ENST00000370496 TUBB1Q9H4B7 451 aa13.9□□□□□ -0.18
COL9A1-204ENST00000370496 LRTM1Q9HBL6 345 aa13.9□□□□□ -0.18
COL9A1-204ENST00000370496 ZDHHC2Q9UIJ5 367 aa13.9□□□□□ -0.18
COL9A1-204ENST00000370496 TP53TG5Q9Y2B4 290 aa13.9□□□□□ -0.18
COL9A1-204ENST00000370496 RAP2CQ9Y3L5 183 aa13.9□□□□□ -0.18
COL9A1-204ENST00000370496 POLR3HQ9Y535 204 aaPredicted RBP13.9□□□□□ -0.18
COL9A1-204ENST00000370496 IGSF10Q6WRI0 2623 aa13.9□□□□□ -0.18
COL9A1-204ENST00000370496 MYOCOSA0A1B0GUC4 107 aa13.89□□□□□ -0.19
COL9A1-204ENST00000370496 SEC22BO75396 215 aa13.89□□□□□ -0.19
COL9A1-204ENST00000370496 SERPINA7P05543 415 aa13.89□□□□□ -0.19
COL9A1-204ENST00000370496 CELA2AP08217 269 aa13.89□□□□□ -0.19
COL9A1-204ENST00000370496 ANXA4P09525 319 aaPredicted RBP13.89□□□□□ -0.19
COL9A1-204ENST00000370496 COX7A2P14406 83 aa13.89□□□□□ -0.19
COL9A1-204ENST00000370496 ALDH9A1P49189 494 aa13.89□□□□□ -0.19
COL9A1-204ENST00000370496 SLC26A5P58743 744 aa13.89□□□□□ -0.19
COL9A1-204ENST00000370496 TRA2BP62995 288 aaKnown RBP13.89□□□□□ -0.19
COL9A1-204ENST00000370496 RPL38P63173 70 aaKnown RBP13.89□□□□□ -0.19
COL9A1-204ENST00000370496 RAE1P78406 368 aaKnown RBP13.89□□□□□ -0.19
COL9A1-204ENST00000370496 ZNF763Q0D2J5 394 aa13.89□□□□□ -0.19
COL9A1-204ENST00000370496 Q0VFX4 171 aa13.89□□□□□ -0.19
COL9A1-204ENST00000370496 TERF2Q15554 542 aa13.89□□□□□ -0.19
COL9A1-204ENST00000370496 ELAVL1Q15717 326 aaKnown RBP13.89□□□□□ -0.19
COL9A1-204ENST00000370496 GALNTL6Q49A17 601 aa13.89□□□□□ -0.19
COL9A1-204ENST00000370496 VWA5B1Q5TIE3 1220 aa13.89□□□□□ -0.19
COL9A1-204ENST00000370496 PLAG1Q6DJT9 500 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms