RNA–Protein interactions for RNA: ENST00000363313.1

RNU6-238P-201, Transcript of RNA, U6 small nuclear 238, pseudogene, humanhuman

BASIC

Gene RNU6-238P, Length 106 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-238P-201ENST00000363313 CCM2Q9BSQ5 444 aa0.89□□□□□ -2.27
RNU6-238P-201ENST00000363313 GPR88Q9GZN0 384 aa0.89□□□□□ -2.27
RNU6-238P-201ENST00000363313 TIGARQ9NQ88 270 aa0.89□□□□□ -2.27
RNU6-238P-201ENST00000363313 SPG21Q9NZD8 308 aa0.89□□□□□ -2.27
RNU6-238P-201ENST00000363313 RCOR3Q9P2K3 495 aaPredicted RBP0.89□□□□□ -2.27
RNU6-238P-201ENST00000363313 PHF11Q9UIL8 331 aa0.89□□□□□ -2.27
RNU6-238P-201ENST00000363313 GTF2A1LQ9UNN4 478 aa0.89□□□□□ -2.27
RNU6-238P-201ENST00000363313 WSB1Q9Y6I7 421 aa0.89□□□□□ -2.27
RNU6-238P-201ENST00000363313 MUC6Q6W4X9 2439 aa0.89□□□□□ -2.27
RNU6-238P-201ENST00000363313 OR5H15A6NDH6 313 aa0.88□□□□□ -2.27
RNU6-238P-201ENST00000363313 SPRY1O43609 319 aaPredicted RBP0.88□□□□□ -2.27
RNU6-238P-201ENST00000363313 GPX5O75715 221 aa0.88□□□□□ -2.27
RNU6-238P-201ENST00000363313 LUC7L3O95232 432 aaKnown RBP0.88□□□□□ -2.27
RNU6-238P-201ENST00000363313 IGKV1D-16P01601 117 aa0.88□□□□□ -2.27
RNU6-238P-201ENST00000363313 IGHV3-23P01764 117 aa0.88□□□□□ -2.27
RNU6-238P-201ENST00000363313 MMP10P09238 476 aa0.88□□□□□ -2.27
RNU6-238P-201ENST00000363313 STAG3L1P0CL83 205 aa0.88□□□□□ -2.27
RNU6-238P-201ENST00000363313 CDH5P33151 784 aaPredicted RBP0.88□□□□□ -2.27
RNU6-238P-201ENST00000363313 SLC1A3P43003 542 aa0.88□□□□□ -2.27
RNU6-238P-201ENST00000363313 SLC26A2P50443 739 aa0.88□□□□□ -2.27
RNU6-238P-201ENST00000363313 NAP1L1P55209 391 aaKnown RBP0.88□□□□□ -2.27
RNU6-238P-201ENST00000363313 MPP1Q00013 466 aa0.88□□□□□ -2.27
RNU6-238P-201ENST00000363313 EPS8Q12929 822 aa0.88□□□□□ -2.27
RNU6-238P-201ENST00000363313 DHX8Q14562 1220 aaKnown RBP0.88□□□□□ -2.27
RNU6-238P-201ENST00000363313 FAM174BQ3ZCQ3 159 aa0.88□□□□□ -2.27
RNU6-238P-201ENST00000363313 ZSCAN25Q6NSZ9 544 aa0.88□□□□□ -2.27
RNU6-238P-201ENST00000363313 ZBTB49Q6ZSB9 765 aa0.88□□□□□ -2.27
RNU6-238P-201ENST00000363313 MFN1Q8IWA4 741 aa0.88□□□□□ -2.27
RNU6-238P-201ENST00000363313 RNF182Q8N6D2 247 aa0.88□□□□□ -2.27
RNU6-238P-201ENST00000363313 APPL2Q8NEU8 664 aa0.88□□□□□ -2.27
RNU6-238P-201ENST00000363313 SLC17A9Q9BYT1 436 aa0.88□□□□□ -2.27
RNU6-238P-201ENST00000363313 SNX25Q9H3E2 840 aa0.88□□□□□ -2.27
RNU6-238P-201ENST00000363313 XAB2Q9HCS7 855 aaKnown RBP0.88□□□□□ -2.27
RNU6-238P-201ENST00000363313 PHPT1Q9NRX4 125 aaPredicted RBP0.88□□□□□ -2.27
RNU6-238P-201ENST00000363313 RAI14Q9P0K7 980 aa0.88□□□□□ -2.27
RNU6-238P-201ENST00000363313 PDE10AQ9Y233 779 aa0.88□□□□□ -2.27
RNU6-238P-201ENST00000363313 EXOC6BQ9Y2D4 811 aa0.88□□□□□ -2.27
RNU6-238P-201ENST00000363313 TENM1Q9UKZ4 2725 aa0.88□□□□□ -2.27
RNU6-238P-201ENST00000363313 A0A0G2JLM5 398 aa0.87□□□□□ -2.27
RNU6-238P-201ENST00000363313 EDDM13A0A1B0GTR0 161 aa0.87□□□□□ -2.27
RNU6-238P-201ENST00000363313 TMEM150BA6NC51 233 aa0.87□□□□□ -2.27
RNU6-238P-201ENST00000363313 SLC15A5A6NIM6 579 aa0.87□□□□□ -2.27
RNU6-238P-201ENST00000363313 AP3D1O14617 1153 aa0.87□□□□□ -2.27
RNU6-238P-201ENST00000363313 MLNRO43193 412 aa0.87□□□□□ -2.27
RNU6-238P-201ENST00000363313 TSPAN9O75954 239 aa0.87□□□□□ -2.27
RNU6-238P-201ENST00000363313 MBD4O95243 580 aa0.87□□□□□ -2.27
RNU6-238P-201ENST00000363313 HPNP05981 417 aa0.87□□□□□ -2.27
RNU6-238P-201ENST00000363313 IGKV4-1P06312 121 aa0.87□□□□□ -2.27
RNU6-238P-201ENST00000363313 FHP07954 510 aa0.87□□□□□ -2.27
RNU6-238P-201ENST00000363313 GCH1P30793 250 aa0.87□□□□□ -2.27
RNU6-238P-201ENST00000363313 ARHGDIAP52565 204 aa0.87□□□□□ -2.27
RNU6-238P-201ENST00000363313 ZNF136P52737 540 aa0.87□□□□□ -2.27
RNU6-238P-201ENST00000363313 SUCLG1P53597 346 aaKnown RBP0.87□□□□□ -2.27
RNU6-238P-201ENST00000363313 UBASH3AP57075 661 aa0.87□□□□□ -2.27
RNU6-238P-201ENST00000363313 TNK1Q13470 666 aa0.87□□□□□ -2.27
RNU6-238P-201ENST00000363313 ZNF542PQ5EBM4 170 aa0.87□□□□□ -2.27
RNU6-238P-201ENST00000363313 TOR1AIP1Q5JTV8 583 aa0.87□□□□□ -2.27
RNU6-238P-201ENST00000363313 ZNF770Q6IQ21 691 aaPredicted RBP0.87□□□□□ -2.27
RNU6-238P-201ENST00000363313 TLK2Q86UE8 772 aa0.87□□□□□ -2.27
RNU6-238P-201ENST00000363313 NLRP14Q86W24 1093 aa0.87□□□□□ -2.27
RNU6-238P-201ENST00000363313 SLC43A2Q8N370 569 aa0.87□□□□□ -2.27
RNU6-238P-201ENST00000363313 TMEM99Q8N816 258 aa0.87□□□□□ -2.27
RNU6-238P-201ENST00000363313 SYT2Q8N9I0 419 aaPredicted RBP0.87□□□□□ -2.27
RNU6-238P-201ENST00000363313 UBA5Q9GZZ9 404 aa0.87□□□□□ -2.27
RNU6-238P-201ENST00000363313 UBQLN3Q9H347 655 aa0.87□□□□□ -2.27
RNU6-238P-201ENST00000363313 CNOT10Q9H9A5 744 aaKnown RBP0.87□□□□□ -2.27
RNU6-238P-201ENST00000363313 PPIEQ9UNP9 301 aaKnown RBP0.87□□□□□ -2.27
RNU6-238P-201ENST00000363313 FLVCR1Q9Y5Y0 555 aa0.87□□□□□ -2.27
RNU6-238P-201ENST00000363313 C2orf92A0A1B0GVN3 265 aa0.86□□□□□ -2.27
RNU6-238P-201ENST00000363313 SYNDIG1LA6NDD5 238 aa0.86□□□□□ -2.27
RNU6-238P-201ENST00000363313 PGRMC2O15173 223 aa0.86□□□□□ -2.27
RNU6-238P-201ENST00000363313 AGR2O95994 175 aa0.86□□□□□ -2.27
RNU6-238P-201ENST00000363313 CDX1P47902 265 aaPredicted RBP0.86□□□□□ -2.27
RNU6-238P-201ENST00000363313 FHITP49789 147 aa0.86□□□□□ -2.27
RNU6-238P-201ENST00000363313 MTCP1P56278 107 aa0.86□□□□□ -2.27
RNU6-238P-201ENST00000363313 MSLNQ13421 630 aaPredicted RBP0.86□□□□□ -2.27
RNU6-238P-201ENST00000363313 GPNMBQ14956 572 aa0.86□□□□□ -2.27
RNU6-238P-201ENST00000363313 NHSL2Q5HYW2 709 aa0.86□□□□□ -2.27
RNU6-238P-201ENST00000363313 MOB1BQ7L9L4 216 aa0.86□□□□□ -2.27
RNU6-238P-201ENST00000363313 PIGWQ7Z7B1 504 aa0.86□□□□□ -2.27
RNU6-238P-201ENST00000363313 CADM2Q8N3J6 435 aa0.86□□□□□ -2.27
RNU6-238P-201ENST00000363313 SMPDL3AQ92484 453 aa0.86□□□□□ -2.27
RNU6-238P-201ENST00000363313 PIWIL1Q96J94 861 aaKnown RBP0.86□□□□□ -2.27
RNU6-238P-201ENST00000363313 ZNF215Q9UL58 517 aaPredicted RBP0.86□□□□□ -2.27
RNU6-238P-201ENST00000363313 PPIAL4AQ9Y536 164 aa0.86□□□□□ -2.27
RNU6-238P-201ENST00000363313 E5RGE8 158 aa0.85□□□□□ -2.27
RNU6-238P-201ENST00000363313 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP0.85□□□□□ -2.27
RNU6-238P-201ENST00000363313 CCSO14618 274 aa0.85□□□□□ -2.27
RNU6-238P-201ENST00000363313 ENTPD3O75355 529 aa0.85□□□□□ -2.27
RNU6-238P-201ENST00000363313 SBK2P0C263 348 aa0.85□□□□□ -2.27
RNU6-238P-201ENST00000363313 CYP11B2P19099 503 aa0.85□□□□□ -2.27
RNU6-238P-201ENST00000363313 GABRR1P24046 479 aa0.85□□□□□ -2.27
RNU6-238P-201ENST00000363313 DCAF7P61962 342 aa0.85□□□□□ -2.27
RNU6-238P-201ENST00000363313 MC1RQ01726 317 aa0.85□□□□□ -2.27
RNU6-238P-201ENST00000363313 PAX5Q02548 391 aa0.85□□□□□ -2.27
RNU6-238P-201ENST00000363313 EGFEM1PQ0D2K5 195 aa0.85□□□□□ -2.27
RNU6-238P-201ENST00000363313 KRT31Q15323 416 aa0.85□□□□□ -2.27
RNU6-238P-201ENST00000363313 LETM2Q2VYF4 491 aa0.85□□□□□ -2.27
RNU6-238P-201ENST00000363313 CAMKMTQ7Z624 323 aa0.85□□□□□ -2.27
RNU6-238P-201ENST00000363313 ADAMTSL2Q86TH1 951 aa0.85□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms