RNA–Protein interactions for RNA: ENST00000361439.8

NSMCE1-201, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NSMCE1, Length 1,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-201ENST00000361439 FNDC5Q8NAU1 212 aa13□□□□□ -0.33
NSMCE1-201ENST00000361439 CEP70Q8NHQ1 597 aa13□□□□□ -0.33
NSMCE1-201ENST00000361439 C16orf78Q8WTQ4 265 aa13□□□□□ -0.33
NSMCE1-201ENST00000361439 PTCHD1Q96NR3 888 aa13□□□□□ -0.33
NSMCE1-201ENST00000361439 AKTIPQ9H8T0 292 aa13□□□□□ -0.33
NSMCE1-201ENST00000361439 PRTFDC1Q9NRG1 225 aa13□□□□□ -0.33
NSMCE1-201ENST00000361439 NOP53Q9NZM5 478 aaKnown RBP13□□□□□ -0.33
NSMCE1-201ENST00000361439 MARCOQ9UEW3 520 aaPredicted RBP13□□□□□ -0.33
NSMCE1-201ENST00000361439 ZMIZ1Q9ULJ6 1067 aa13□□□□□ -0.33
NSMCE1-201ENST00000361439 PCDHA9Q9Y5H5 950 aa13□□□□□ -0.33
NSMCE1-201ENST00000361439 MRPS18BQ9Y676 258 aaKnown RBP13□□□□□ -0.33
NSMCE1-201ENST00000361439 TCRBV16S1A1N1A0A5B0 115 aa12.99□□□□□ -0.33
NSMCE1-201ENST00000361439 FAM227AF5H4B4 570 aa12.99□□□□□ -0.33
NSMCE1-201ENST00000361439 PEX12O00623 359 aa12.99□□□□□ -0.33
NSMCE1-201ENST00000361439 SDHDO14521 159 aa12.99□□□□□ -0.33
NSMCE1-201ENST00000361439 JRKO75564 520 aa12.99□□□□□ -0.33
NSMCE1-201ENST00000361439 CDC123O75794 336 aaPredicted RBP12.99□□□□□ -0.33
NSMCE1-201ENST00000361439 AIFM1O95831 613 aa12.99□□□□□ -0.33
NSMCE1-201ENST00000361439 DDCP20711 480 aa12.99□□□□□ -0.33
NSMCE1-201ENST00000361439 RPL3P39023 403 aaKnown RBP12.99□□□□□ -0.33
NSMCE1-201ENST00000361439 RRADP55042 308 aa12.99□□□□□ -0.33
NSMCE1-201ENST00000361439 TAS2R50P59544 299 aa12.99□□□□□ -0.33
NSMCE1-201ENST00000361439 AP2B1P63010 937 aa12.99□□□□□ -0.33
NSMCE1-201ENST00000361439 CDC20Q12834 499 aa12.99□□□□□ -0.33
NSMCE1-201ENST00000361439 SLC13A2Q13183 592 aa12.99□□□□□ -0.33
NSMCE1-201ENST00000361439 IL10RAQ13651 578 aa12.99□□□□□ -0.33
NSMCE1-201ENST00000361439 COL9A2Q14055 689 aaPredicted RBP12.99□□□□□ -0.33
NSMCE1-201ENST00000361439 ERV3-1Q14264 604 aa12.99□□□□□ -0.33
NSMCE1-201ENST00000361439 TERF2Q15554 542 aa12.99□□□□□ -0.33
NSMCE1-201ENST00000361439 FAM71E1Q6IPT2 247 aa12.99□□□□□ -0.33
NSMCE1-201ENST00000361439 EPGNQ6UW88 154 aa12.99□□□□□ -0.33
NSMCE1-201ENST00000361439 SHISA6Q6ZSJ9 500 aa12.99□□□□□ -0.33
NSMCE1-201ENST00000361439 FAM47EQ6ZV65 393 aa12.99□□□□□ -0.33
NSMCE1-201ENST00000361439 SPATA19Q7Z5L4 167 aa12.99□□□□□ -0.33
NSMCE1-201ENST00000361439 PRSS58Q8IYP2 241 aa12.99□□□□□ -0.33
NSMCE1-201ENST00000361439 MTERF3Q96E29 417 aa12.99□□□□□ -0.33
NSMCE1-201ENST00000361439 CSF3RQ99062 836 aa12.99□□□□□ -0.33
NSMCE1-201ENST00000361439 PELOQ9BRX2 385 aaKnown RBP12.99□□□□□ -0.33
NSMCE1-201ENST00000361439 WDR70Q9NW82 654 aa12.99□□□□□ -0.33
NSMCE1-201ENST00000361439 TEX10Q9NXF1 929 aaPredicted RBP12.99□□□□□ -0.33
NSMCE1-201ENST00000361439 TAS2R7Q9NYW3 318 aa12.99□□□□□ -0.33
NSMCE1-201ENST00000361439 POLHQ9Y253 713 aa12.99□□□□□ -0.33
NSMCE1-201ENST00000361439 DLGAP4Q9Y2H0 992 aa12.99□□□□□ -0.33
NSMCE1-201ENST00000361439 POLR3HQ9Y535 204 aaPredicted RBP12.99□□□□□ -0.33
NSMCE1-201ENST00000361439 HS3ST3B1Q9Y662 390 aa12.99□□□□□ -0.33
NSMCE1-201ENST00000361439 ZFHX4Q86UP3 3567 aa12.99□□□□□ -0.33
NSMCE1-201ENST00000361439 SRRM3A6NNA2 597 aaPredicted RBP12.98□□□□□ -0.33
NSMCE1-201ENST00000361439 SOCS6O14544 535 aa12.98□□□□□ -0.33
NSMCE1-201ENST00000361439 TBX19O60806 448 aa12.98□□□□□ -0.33
NSMCE1-201ENST00000361439 GPR75O95800 540 aa12.98□□□□□ -0.33
NSMCE1-201ENST00000361439 TROVE2P10155 538 aaKnown RBP eCLIP12.98□□□□□ -0.33
NSMCE1-201ENST00000361439 BCKDHAP12694 445 aa12.98□□□□□ -0.33
NSMCE1-201ENST00000361439 ICAM2P13598 275 aa12.98□□□□□ -0.33
NSMCE1-201ENST00000361439 SDC1P18827 310 aa12.98□□□□□ -0.33
NSMCE1-201ENST00000361439 WT1P19544 449 aaPredicted RBP12.98□□□□□ -0.33
NSMCE1-201ENST00000361439 GALNSP34059 522 aa12.98□□□□□ -0.33
NSMCE1-201ENST00000361439 C21orf58P58505 322 aa12.98□□□□□ -0.33
NSMCE1-201ENST00000361439 STX4Q12846 297 aa12.98□□□□□ -0.33
NSMCE1-201ENST00000361439 C18orf63Q68DL7 685 aa12.98□□□□□ -0.33
NSMCE1-201ENST00000361439 SLC48A1Q6P1K1 146 aa12.98□□□□□ -0.33
NSMCE1-201ENST00000361439 KIRREL2Q6UWL6 708 aa12.98□□□□□ -0.33
NSMCE1-201ENST00000361439 ACAD11Q709F0 780 aa12.98□□□□□ -0.33
NSMCE1-201ENST00000361439 NDUFAF7Q7L592 441 aa12.98□□□□□ -0.33
NSMCE1-201ENST00000361439 CPEB2Q7Z5Q1 589 aaKnown RBP12.98□□□□□ -0.33
NSMCE1-201ENST00000361439 PPP1R32Q7Z5V6 425 aa12.98□□□□□ -0.33
NSMCE1-201ENST00000361439 CLNKQ7Z7G1 428 aa12.98□□□□□ -0.33
NSMCE1-201ENST00000361439 MRGPREQ86SM8 312 aa12.98□□□□□ -0.33
NSMCE1-201ENST00000361439 TMEM102Q8N9M5 508 aaPredicted RBP12.98□□□□□ -0.33
NSMCE1-201ENST00000361439 DNAJB14Q8TBM8 379 aa12.98□□□□□ -0.33
NSMCE1-201ENST00000361439 FER1L6-AS2Q96M78 137 aa12.98□□□□□ -0.33
NSMCE1-201ENST00000361439 CNTNAP3BQ96NU0 1288 aa12.98□□□□□ -0.33
NSMCE1-201ENST00000361439 CCDC28BQ9BUN5 200 aa12.98□□□□□ -0.33
NSMCE1-201ENST00000361439 EBPLQ9BY08 206 aa12.98□□□□□ -0.33
NSMCE1-201ENST00000361439 RBCK1Q9BYM8 510 aa12.98□□□□□ -0.33
NSMCE1-201ENST00000361439 TRIM55Q9BYV6 548 aa12.98□□□□□ -0.33
NSMCE1-201ENST00000361439 CNTNAP3Q9BZ76 1288 aa12.98□□□□□ -0.33
NSMCE1-201ENST00000361439 ZNF700Q9H0M5 742 aa12.98□□□□□ -0.33
NSMCE1-201ENST00000361439 CES1P1Q9UKY3 287 aa12.98□□□□□ -0.33
NSMCE1-201ENST00000361439 CLDN16Q9Y5I7 305 aa12.98□□□□□ -0.33
NSMCE1-201ENST00000361439 LAMA5O15230 3695 aa12.98□□□□□ -0.33
NSMCE1-201ENST00000361439 CDC14CA4D256 554 aa12.97□□□□□ -0.33
NSMCE1-201ENST00000361439 NKX2-8O15522 239 aa12.97□□□□□ -0.33
NSMCE1-201ENST00000361439 ITGB2P05107 769 aa12.97□□□□□ -0.33
NSMCE1-201ENST00000361439 VIMP08670 466 aaKnown RBP12.97□□□□□ -0.33
NSMCE1-201ENST00000361439 IL3P08700 152 aa12.97□□□□□ -0.33
NSMCE1-201ENST00000361439 SLC35E2P0CK97 266 aa12.97□□□□□ -0.33
NSMCE1-201ENST00000361439 ATXN8OSP0DMR3 200 aa12.97□□□□□ -0.33
NSMCE1-201ENST00000361439 PRPS1L1P21108 318 aa12.97□□□□□ -0.33
NSMCE1-201ENST00000361439 MAOAP21397 527 aa12.97□□□□□ -0.33
NSMCE1-201ENST00000361439 PIK3R1P27986 724 aa12.97□□□□□ -0.33
NSMCE1-201ENST00000361439 ITPKBP27987 946 aa12.97□□□□□ -0.33
NSMCE1-201ENST00000361439 EPHA3P29320 983 aa12.97□□□□□ -0.33
NSMCE1-201ENST00000361439 OTX2P32243 289 aa12.97□□□□□ -0.33
NSMCE1-201ENST00000361439 HNRNPFP52597 415 aaKnown RBP12.97□□□□□ -0.33
NSMCE1-201ENST00000361439 AQP5P55064 265 aa12.97□□□□□ -0.33
NSMCE1-201ENST00000361439 BTG2P78543 158 aa12.97□□□□□ -0.33
NSMCE1-201ENST00000361439 ACTN3Q08043 901 aaPredicted RBP12.97□□□□□ -0.33
NSMCE1-201ENST00000361439 SRSF6Q13247 344 aaKnown RBP12.97□□□□□ -0.33
NSMCE1-201ENST00000361439 IL23RQ5VWK5 629 aa12.97□□□□□ -0.33
NSMCE1-201ENST00000361439 MAVSQ7Z434 540 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms