RNA–Protein interactions for RNA: ENST00000359082.3

SHANK1-202, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 5 BASIC

Gene SHANK1, Length 6,459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-202ENST00000359082 PIAS4Q8N2W9 510 aaPredicted RBP17.67■□□□□ 0.42
SHANK1-202ENST00000359082 DOK4Q8TEW6 326 aa17.67■□□□□ 0.42
SHANK1-202ENST00000359082 OR1F2PQ96R84 312 aa17.67■□□□□ 0.42
SHANK1-202ENST00000359082 SGIP1Q9BQI5 828 aa17.67■□□□□ 0.42
SHANK1-202ENST00000359082 ZFR2Q9UPR6 939 aaKnown RBP17.67■□□□□ 0.42
SHANK1-202ENST00000359082 ARRB1P49407 418 aaPredicted RBP17.67■□□□□ 0.42
SHANK1-202ENST00000359082 ZNF367Q7RTV3 350 aa17.67■□□□□ 0.42
SHANK1-202ENST00000359082 ZNF572Q7Z3I7 529 aaPredicted RBP17.67■□□□□ 0.42
SHANK1-202ENST00000359082 ZSWIM9Q86XI8 627 aa17.67■□□□□ 0.42
SHANK1-202ENST00000359082 PEBP4Q96S96 227 aa17.67■□□□□ 0.42
SHANK1-202ENST00000359082 SMOQ99835 787 aa17.67■□□□□ 0.42
SHANK1-202ENST00000359082 YARS2Q9Y2Z4 477 aaKnown RBP17.67■□□□□ 0.42
SHANK1-202ENST00000359082 M0R233 179 aa17.67■□□□□ 0.42
SHANK1-202ENST00000359082 SOCS2O14508 198 aa17.67■□□□□ 0.42
SHANK1-202ENST00000359082 LEFTY1O75610 366 aa17.67■□□□□ 0.42
SHANK1-202ENST00000359082 GALTP07902 379 aa17.67■□□□□ 0.42
SHANK1-202ENST00000359082 HSD17B12Q53GQ0 312 aa17.67■□□□□ 0.42
SHANK1-202ENST00000359082 P2RY13Q9BPV8 354 aa17.67■□□□□ 0.42
SHANK1-202ENST00000359082 G6PC3Q9BUM1 346 aa17.67■□□□□ 0.42
SHANK1-202ENST00000359082 SLC7A11Q9UPY5 501 aa17.67■□□□□ 0.42
SHANK1-202ENST00000359082 BCAS2O75934 225 aaPredicted RBP17.66■□□□□ 0.42
SHANK1-202ENST00000359082 ZNF81P51508 661 aa17.66■□□□□ 0.42
SHANK1-202ENST00000359082 MRPL49Q13405 166 aaKnown RBP17.66■□□□□ 0.42
SHANK1-202ENST00000359082 SERINC3Q13530 473 aa17.66■□□□□ 0.42
SHANK1-202ENST00000359082 MTFR2Q6P444 385 aa17.66■□□□□ 0.42
SHANK1-202ENST00000359082 LRRN1Q6UXK5 716 aa17.66■□□□□ 0.42
SHANK1-202ENST00000359082 PSD4Q8NDX1 1056 aa17.66■□□□□ 0.42
SHANK1-202ENST00000359082 FBRSL1Q9HCM7 1045 aaKnown RBP17.66■□□□□ 0.42
SHANK1-202ENST00000359082 PIGRP01833 764 aa17.66■□□□□ 0.42
SHANK1-202ENST00000359082 IL3P08700 152 aa17.66■□□□□ 0.42
SHANK1-202ENST00000359082 PET100P0DJ07 73 aa17.66■□□□□ 0.42
SHANK1-202ENST00000359082 S100A12P80511 92 aa17.66■□□□□ 0.42
SHANK1-202ENST00000359082 PLD6Q8N2A8 252 aaKnown RBP17.66■□□□□ 0.42
SHANK1-202ENST00000359082 NPLOC4Q8TAT6 608 aa17.66■□□□□ 0.42
SHANK1-202ENST00000359082 KLHL15Q96M94 604 aa17.66■□□□□ 0.42
SHANK1-202ENST00000359082 A0A0U1RQF3 1178 aa17.66■□□□□ 0.42
SHANK1-202ENST00000359082 FARS2O95363 451 aaKnown RBP17.66■□□□□ 0.42
SHANK1-202ENST00000359082 GKN3PP0CG01 181 aa17.66■□□□□ 0.42
SHANK1-202ENST00000359082 HNF1BP35680 557 aa17.66■□□□□ 0.42
SHANK1-202ENST00000359082 PLEKHS1Q5SXH7 462 aa17.66■□□□□ 0.42
SHANK1-202ENST00000359082 TMEM185BQ9H7F4 350 aa17.66■□□□□ 0.42
SHANK1-202ENST00000359082 MTMR11A4FU01 709 aa17.66■□□□□ 0.42
SHANK1-202ENST00000359082 CLCA1A8K7I4 914 aa17.66■□□□□ 0.42
SHANK1-202ENST00000359082 H7C417 338 aa17.66■□□□□ 0.42
SHANK1-202ENST00000359082 SHMT2P34897 504 aa17.66■□□□□ 0.42
SHANK1-202ENST00000359082 LY6G5CQ5SRR4 150 aa17.66■□□□□ 0.42
SHANK1-202ENST00000359082 SNIP1Q8TAD8 396 aaKnown RBP17.66■□□□□ 0.42
SHANK1-202ENST00000359082 C7orf34Q96L11 122 aa17.66■□□□□ 0.42
SHANK1-202ENST00000359082 MRPL15Q9P015 296 aaKnown RBP17.66■□□□□ 0.42
SHANK1-202ENST00000359082 PPP4R1LQ9P1A2 415 aa17.66■□□□□ 0.42
SHANK1-202ENST00000359082 CD9P21926 228 aa17.66■□□□□ 0.42
SHANK1-202ENST00000359082 GNMTQ14749 295 aa17.66■□□□□ 0.42
SHANK1-202ENST00000359082 RAB30Q15771 203 aa17.66■□□□□ 0.42
SHANK1-202ENST00000359082 TMEM69Q5SWH9 247 aa17.66■□□□□ 0.42
SHANK1-202ENST00000359082 ASPGQ86U10 573 aa17.66■□□□□ 0.42
SHANK1-202ENST00000359082 S100PBPQ96BU1 408 aa17.66■□□□□ 0.42
SHANK1-202ENST00000359082 TGM7Q96PF1 710 aa17.66■□□□□ 0.42
SHANK1-202ENST00000359082 EPHA6Q9UF33 1036 aa17.66■□□□□ 0.42
SHANK1-202ENST00000359082 MYO5BQ9ULV0 1848 aa17.66■□□□□ 0.42
SHANK1-202ENST00000359082 DCDC5Q6ZRR9 648 aa17.66■□□□□ 0.42
SHANK1-202ENST00000359082 GALNT10Q86SR1 603 aa17.66■□□□□ 0.42
SHANK1-202ENST00000359082 C14orf80Q86SX3 495 aa17.66■□□□□ 0.42
SHANK1-202ENST00000359082 CREB3L1Q96BA8 519 aa17.66■□□□□ 0.42
SHANK1-202ENST00000359082 NCDNQ9UBB6 729 aa17.66■□□□□ 0.42
SHANK1-202ENST00000359082 NPPAP01160 153 aa17.65■□□□□ 0.42
SHANK1-202ENST00000359082 TBRG1Q3YBR2 411 aa17.65■□□□□ 0.42
SHANK1-202ENST00000359082 XKR5Q6UX68 686 aa17.65■□□□□ 0.42
SHANK1-202ENST00000359082 CEACAM19Q7Z692 300 aa17.65■□□□□ 0.42
SHANK1-202ENST00000359082 IGDCC3Q8IVU1 814 aa17.65■□□□□ 0.42
SHANK1-202ENST00000359082 OR6Q1Q8NGQ2 317 aa17.65■□□□□ 0.42
SHANK1-202ENST00000359082 C14orf119Q9NWQ9 140 aa17.65■□□□□ 0.42
SHANK1-202ENST00000359082 MAB21L2Q9Y586 359 aa17.65■□□□□ 0.42
SHANK1-202ENST00000359082 BEST1O76090 585 aa17.65■□□□□ 0.42
SHANK1-202ENST00000359082 CPNE6O95741 557 aa17.65■□□□□ 0.42
SHANK1-202ENST00000359082 FASLGP48023 281 aa17.65■□□□□ 0.42
SHANK1-202ENST00000359082 SLAMF1Q13291 335 aa17.65■□□□□ 0.42
SHANK1-202ENST00000359082 DCAF4L2Q8NA75 395 aa17.65■□□□□ 0.42
SHANK1-202ENST00000359082 EIF5A2Q9GZV4 153 aaKnown RBP17.65■□□□□ 0.42
SHANK1-202ENST00000359082 ELOCQ15369 112 aa17.65■□□□□ 0.42
SHANK1-202ENST00000359082 SLCO2A1Q92959 643 aa17.65■□□□□ 0.42
SHANK1-202ENST00000359082 PTCHD1Q96NR3 888 aa17.65■□□□□ 0.42
SHANK1-202ENST00000359082 MAN2C1Q9NTJ4 1040 aa17.65■□□□□ 0.42
SHANK1-202ENST00000359082 B8ZZF3 427 aa17.65■□□□□ 0.42
SHANK1-202ENST00000359082 CNOT4O95628 575 aaKnown RBP17.65■□□□□ 0.42
SHANK1-202ENST00000359082 CSTAP01040 98 aa17.65■□□□□ 0.42
SHANK1-202ENST00000359082 MOGQ16653 247 aa17.65■□□□□ 0.42
SHANK1-202ENST00000359082 ZER1Q7Z7L7 766 aa17.65■□□□□ 0.42
SHANK1-202ENST00000359082 MFSD8Q8NHS3 518 aa17.65■□□□□ 0.42
SHANK1-202ENST00000359082 NSUN5Q96P11 429 aaKnown RBP17.65■□□□□ 0.42
SHANK1-202ENST00000359082 STRADBQ9C0K7 418 aa17.65■□□□□ 0.42
SHANK1-202ENST00000359082 GPR34Q9UPC5 381 aa17.65■□□□□ 0.42
SHANK1-202ENST00000359082 PCDHB3Q9Y5E6 796 aa17.65■□□□□ 0.42
SHANK1-202ENST00000359082 PLIN4Q96Q06 1357 aa17.65■□□□□ 0.42
SHANK1-202ENST00000359082 GABBR2O75899 941 aa17.65■□□□□ 0.42
SHANK1-202ENST00000359082 CD3GP09693 182 aa17.65■□□□□ 0.42
SHANK1-202ENST00000359082 ACRV1P26436 265 aa17.65■□□□□ 0.42
SHANK1-202ENST00000359082 ATP4BP51164 291 aa17.65■□□□□ 0.42
SHANK1-202ENST00000359082 DNAJB13P59910 316 aa17.65■□□□□ 0.42
SHANK1-202ENST00000359082 TXNDC5Q8NBS9 432 aaKnown RBP17.65■□□□□ 0.42
SHANK1-202ENST00000359082 NEIL3Q8TAT5 605 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms