RNA–Protein interactions for RNA: ENST00000358730.6

RFX3-202, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 2,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-202ENST00000358730 C5AR2Q9P296 337 aa8.18□□□□□ -1.1
RFX3-202ENST00000358730 NUP210Q8TEM1 1887 aaPredicted RBP8.18□□□□□ -1.1
RFX3-202ENST00000358730 TRIM43BA6NCK2 446 aa8.18□□□□□ -1.1
RFX3-202ENST00000358730 PDPK1O15530 556 aa8.18□□□□□ -1.1
RFX3-202ENST00000358730 KIAA0513O60268 411 aa8.18□□□□□ -1.1
RFX3-202ENST00000358730 MED26O95402 600 aa8.18□□□□□ -1.1
RFX3-202ENST00000358730 LINC00271P0C7V0 271 aa8.18□□□□□ -1.1
RFX3-202ENST00000358730 ADH5P11766 374 aa8.18□□□□□ -1.1
RFX3-202ENST00000358730 ALOX12P18054 663 aa8.18□□□□□ -1.1
RFX3-202ENST00000358730 DDCP20711 480 aa8.18□□□□□ -1.1
RFX3-202ENST00000358730 MAGP20916 626 aa8.18□□□□□ -1.1
RFX3-202ENST00000358730 ACADLP28330 430 aa8.18□□□□□ -1.1
RFX3-202ENST00000358730 SOX6P35712 828 aa8.18□□□□□ -1.1
RFX3-202ENST00000358730 FEN1P39748 380 aaKnown RBP8.18□□□□□ -1.1
RFX3-202ENST00000358730 MNX1P50219 401 aaPredicted RBP8.18□□□□□ -1.1
RFX3-202ENST00000358730 MANFP55145 182 aaKnown RBP8.18□□□□□ -1.1
RFX3-202ENST00000358730 TPTEP56180 551 aa8.18□□□□□ -1.1
RFX3-202ENST00000358730 ZNF45Q02386 682 aa8.18□□□□□ -1.1
RFX3-202ENST00000358730 PRKCDQ05655 676 aa8.18□□□□□ -1.1
RFX3-202ENST00000358730 CDC20Q12834 499 aa8.18□□□□□ -1.1
RFX3-202ENST00000358730 NUMA1Q14980 2115 aa8.18□□□□□ -1.1
RFX3-202ENST00000358730 TIMM50Q3ZCQ8 353 aa8.18□□□□□ -1.1
RFX3-202ENST00000358730 SPDYE7PQ495Y7 208 aa8.18□□□□□ -1.1
RFX3-202ENST00000358730 SAXO2Q658L1 398 aa8.18□□□□□ -1.1
RFX3-202ENST00000358730 PNCKQ6P2M8 343 aa8.18□□□□□ -1.1
RFX3-202ENST00000358730 ADGRF3Q8IZF5 1079 aa8.18□□□□□ -1.1
RFX3-202ENST00000358730 FAM46DQ8NEK8 389 aa8.18□□□□□ -1.1
RFX3-202ENST00000358730 VANGL1Q8TAA9 524 aaPredicted RBP8.18□□□□□ -1.1
RFX3-202ENST00000358730 RAB8BQ92930 207 aa8.18□□□□□ -1.1
RFX3-202ENST00000358730 ARRDC3Q96B67 414 aa8.18□□□□□ -1.1
RFX3-202ENST00000358730 NEURL3Q96EH8 262 aa8.18□□□□□ -1.1
RFX3-202ENST00000358730 PDXPQ96GD0 296 aa8.18□□□□□ -1.1
RFX3-202ENST00000358730 TMEM19Q96HH6 336 aa8.18□□□□□ -1.1
RFX3-202ENST00000358730 ZNF514Q96K75 400 aaPredicted RBP8.18□□□□□ -1.1
RFX3-202ENST00000358730 NRTNQ99748 197 aa8.18□□□□□ -1.1
RFX3-202ENST00000358730 MIR1-1HGQ9H1L0 117 aa8.18□□□□□ -1.1
RFX3-202ENST00000358730 AHSPQ9NZD4 102 aa8.18□□□□□ -1.1
RFX3-202ENST00000358730 TAC3Q9UHF0 121 aa8.18□□□□□ -1.1
RFX3-202ENST00000358730 KCND3Q9UK17 655 aa8.18□□□□□ -1.1
RFX3-202ENST00000358730 TMCC3Q9ULS5 477 aa8.18□□□□□ -1.1
RFX3-202ENST00000358730 ICKQ9UPZ9 632 aa8.18□□□□□ -1.1
RFX3-202ENST00000358730 KLK4Q9Y5K2 254 aa8.18□□□□□ -1.1
RFX3-202ENST00000358730 PCYT1BQ9Y5K3 369 aaPredicted RBP8.18□□□□□ -1.1
RFX3-202ENST00000358730 TLR4O00206 839 aa8.17□□□□□ -1.1
RFX3-202ENST00000358730 CCRL2O00421 344 aa8.17□□□□□ -1.1
RFX3-202ENST00000358730 SLC9A3R1O14745 358 aaPredicted RBP8.17□□□□□ -1.1
RFX3-202ENST00000358730 OR10H3O60404 316 aa8.17□□□□□ -1.1
RFX3-202ENST00000358730 EFCAB14O75071 495 aa8.17□□□□□ -1.1
RFX3-202ENST00000358730 PAPLNO95428 1278 aa8.17□□□□□ -1.1
RFX3-202ENST00000358730 ADAP00813 363 aa8.17□□□□□ -1.1
RFX3-202ENST00000358730 DNTTP04053 509 aa8.17□□□□□ -1.1
RFX3-202ENST00000358730 ITGB7P26010 798 aa8.17□□□□□ -1.1
RFX3-202ENST00000358730 MESP2Q0VG99 397 aa8.17□□□□□ -1.1
RFX3-202ENST00000358730 FNDC3BQ53EP0 1204 aaKnown RBP8.17□□□□□ -1.1
RFX3-202ENST00000358730 ZNF697Q5TEC3 545 aa8.17□□□□□ -1.1
RFX3-202ENST00000358730 KHDRBS2Q5VWX1 349 aaKnown RBP8.17□□□□□ -1.1
RFX3-202ENST00000358730 PLAG1Q6DJT9 500 aa8.17□□□□□ -1.1
RFX3-202ENST00000358730 ZNF770Q6IQ21 691 aaPredicted RBP8.17□□□□□ -1.1
RFX3-202ENST00000358730 LCTLQ6UWM7 567 aa8.17□□□□□ -1.1
RFX3-202ENST00000358730 DEF8Q6ZN54 512 aa8.17□□□□□ -1.1
RFX3-202ENST00000358730 SZRD1Q7Z422 152 aa8.17□□□□□ -1.1
RFX3-202ENST00000358730 C17orf64Q86WR6 236 aa8.17□□□□□ -1.1
RFX3-202ENST00000358730 FAM129CQ86XR2 697 aa8.17□□□□□ -1.1
RFX3-202ENST00000358730 CYP4Z2PQ8N1L4 340 aa8.17□□□□□ -1.1
RFX3-202ENST00000358730 OR2L2Q8NH16 312 aa8.17□□□□□ -1.1
RFX3-202ENST00000358730 NXPE3Q969Y0 559 aa8.17□□□□□ -1.1
RFX3-202ENST00000358730 RAD51AP1Q96B01 352 aa8.17□□□□□ -1.1
RFX3-202ENST00000358730 LINC00615Q96LM1 132 aaPredicted RBP8.17□□□□□ -1.1
RFX3-202ENST00000358730 F2RL3Q96RI0 385 aa8.17□□□□□ -1.1
RFX3-202ENST00000358730 OR52A5Q9H2C5 316 aa8.17□□□□□ -1.1
RFX3-202ENST00000358730 NEUROD4Q9HD90 331 aa8.17□□□□□ -1.1
RFX3-202ENST00000358730 A4GALTQ9NPC4 353 aa8.17□□□□□ -1.1
RFX3-202ENST00000358730 ANKMY1Q9P2S6 941 aa8.17□□□□□ -1.1
RFX3-202ENST00000358730 CFL2Q9Y281 166 aa8.17□□□□□ -1.1
RFX3-202ENST00000358730 PEX16Q9Y5Y5 336 aa8.17□□□□□ -1.1
RFX3-202ENST00000358730 C17orf113A0A1B0GUU1 675 aa8.17□□□□□ -1.1
RFX3-202ENST00000358730 H3BN98 237 aa8.17□□□□□ -1.1
RFX3-202ENST00000358730 ARHGAP33O14559 1287 aa8.17□□□□□ -1.1
RFX3-202ENST00000358730 CISD3P0C7P0 127 aa8.17□□□□□ -1.1
RFX3-202ENST00000358730 ADRB3P13945 408 aa8.17□□□□□ -1.1
RFX3-202ENST00000358730 CEBPBP17676 345 aa8.17□□□□□ -1.1
RFX3-202ENST00000358730 KELP23276 732 aa8.17□□□□□ -1.1
RFX3-202ENST00000358730 ELAVL4P26378 380 aaKnown RBP8.17□□□□□ -1.1
RFX3-202ENST00000358730 MAGEA10P43363 369 aaPredicted RBP8.17□□□□□ -1.1
RFX3-202ENST00000358730 LIMK1P53667 647 aa8.17□□□□□ -1.1
RFX3-202ENST00000358730 SEC23BQ15437 767 aa8.17□□□□□ -1.1
RFX3-202ENST00000358730 CARTPTQ16568 116 aa8.17□□□□□ -1.1
RFX3-202ENST00000358730 SPANXN2Q5MJ10 180 aa8.17□□□□□ -1.1
RFX3-202ENST00000358730 DEPDC1Q5TB30 811 aa8.17□□□□□ -1.1
RFX3-202ENST00000358730 ZNF765Q7L2R6 523 aa8.17□□□□□ -1.1
RFX3-202ENST00000358730 GRASPQ7Z6J2 395 aaPredicted RBP8.17□□□□□ -1.1
RFX3-202ENST00000358730 PDZD3Q86UT5 571 aa8.17□□□□□ -1.1
RFX3-202ENST00000358730 DCUN1D3Q8IWE4 304 aa8.17□□□□□ -1.1
RFX3-202ENST00000358730 GPR32P1Q8NGA4 272 aa8.17□□□□□ -1.1
RFX3-202ENST00000358730 WFIKKN2Q8TEU8 576 aa8.17□□□□□ -1.1
RFX3-202ENST00000358730 SETD7Q8WTS6 366 aaKnown RBP8.17□□□□□ -1.1
RFX3-202ENST00000358730 APOBEC4Q8WW27 367 aaKnown RBP8.17□□□□□ -1.1
RFX3-202ENST00000358730 OR8D1Q8WZ84 308 aa8.17□□□□□ -1.1
RFX3-202ENST00000358730 OR5P2Q8WZ92 322 aa8.17□□□□□ -1.1
RFX3-202ENST00000358730 EXOSC8Q96B26 276 aaKnown RBP8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms