RNA–Protein interactions for RNA: ENST00000357604.9

UPF2-202, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,193 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-202ENST00000357604 THOC3Q96J01 351 aaKnown RBP8.7□□□□□ -1.02
UPF2-202ENST00000357604 EQTNQ9NQ60 294 aa8.7□□□□□ -1.02
UPF2-202ENST00000357604 STX18Q9P2W9 335 aaKnown RBP8.7□□□□□ -1.02
UPF2-202ENST00000357604 TMPRSS11EQ9UL52 423 aa8.7□□□□□ -1.02
UPF2-202ENST00000357604 OBSL1O75147 1896 aa8.7□□□□□ -1.02
UPF2-202ENST00000357604 KLRC4-KLRK1H3BQV0 150 aa8.7□□□□□ -1.02
UPF2-202ENST00000357604 M0R3G1 203 aa8.7□□□□□ -1.02
UPF2-202ENST00000357604 GALR3O60755 368 aaPredicted RBP8.7□□□□□ -1.02
UPF2-202ENST00000357604 FGF4P08620 206 aa8.7□□□□□ -1.02
UPF2-202ENST00000357604 FEN1P39748 380 aaKnown RBP8.7□□□□□ -1.02
UPF2-202ENST00000357604 GUCA1AP43080 201 aaPredicted RBP8.7□□□□□ -1.02
UPF2-202ENST00000357604 EEFSECP57772 596 aaKnown RBP8.7□□□□□ -1.02
UPF2-202ENST00000357604 CPEB2Q7Z5Q1 589 aaKnown RBP8.7□□□□□ -1.02
UPF2-202ENST00000357604 PEX5LQ8IYB4 626 aa8.7□□□□□ -1.02
UPF2-202ENST00000357604 DCBLD1Q8N8Z6 715 aa8.7□□□□□ -1.02
UPF2-202ENST00000357604 C1orf216Q8TAB5 229 aa8.7□□□□□ -1.02
UPF2-202ENST00000357604 APOBEC4Q8WW27 367 aaKnown RBP8.7□□□□□ -1.02
UPF2-202ENST00000357604 KIF17Q9P2E2 1029 aa8.7□□□□□ -1.02
UPF2-202ENST00000357604 SLC9A8Q9Y2E8 581 aa8.7□□□□□ -1.02
UPF2-202ENST00000357604 TRABD2BA6NFA1 517 aa8.7□□□□□ -1.02
UPF2-202ENST00000357604 AIM2O14862 343 aa8.7□□□□□ -1.02
UPF2-202ENST00000357604 GPR75O95800 540 aa8.7□□□□□ -1.02
UPF2-202ENST00000357604 LSP1P33241 339 aa8.7□□□□□ -1.02
UPF2-202ENST00000357604 CRISP3P54108 245 aa8.7□□□□□ -1.02
UPF2-202ENST00000357604 SMIM11AP58511 58 aa8.7□□□□□ -1.02
UPF2-202ENST00000357604 SF3A3Q12874 501 aaKnown RBP eCLIP8.7□□□□□ -1.02
UPF2-202ENST00000357604 HSDL2Q6YN16 418 aa8.7□□□□□ -1.02
UPF2-202ENST00000357604 ZNF781Q8N8C0 355 aa8.7□□□□□ -1.02
UPF2-202ENST00000357604 ST6GALNAC1Q9NSC7 600 aaPredicted RBP8.7□□□□□ -1.02
UPF2-202ENST00000357604 P2RX2Q9UBL9 471 aa8.7□□□□□ -1.02
UPF2-202ENST00000357604 TAPBPO15533 448 aa8.69□□□□□ -1.02
UPF2-202ENST00000357604 HIST1H2ABP04908 130 aa8.69□□□□□ -1.02
UPF2-202ENST00000357604 RRM2P31350 389 aa8.69□□□□□ -1.02
UPF2-202ENST00000357604 NUDT2P50583 147 aa8.69□□□□□ -1.02
UPF2-202ENST00000357604 NUP107P57740 925 aa8.69□□□□□ -1.02
UPF2-202ENST00000357604 ERV3-1Q14264 604 aa8.69□□□□□ -1.02
UPF2-202ENST00000357604 KCTD19Q17RG1 926 aaPredicted RBP8.69□□□□□ -1.02
UPF2-202ENST00000357604 NDUFAF5Q5TEU4 345 aa8.69□□□□□ -1.02
UPF2-202ENST00000357604 FAM69BQ5VUD6 431 aa8.69□□□□□ -1.02
UPF2-202ENST00000357604 HIST3H2AQ7L7L0 130 aa8.69□□□□□ -1.02
UPF2-202ENST00000357604 ZNF440Q8IYI8 595 aa8.69□□□□□ -1.02
UPF2-202ENST00000357604 CPSF7Q8N684 471 aaKnown RBP8.69□□□□□ -1.02
UPF2-202ENST00000357604 OR2A1Q8NGT9 310 aa8.69□□□□□ -1.02
UPF2-202ENST00000357604 UTP15Q8TED0 518 aaKnown RBP8.69□□□□□ -1.02
UPF2-202ENST00000357604 NR4A3Q92570 626 aa8.69□□□□□ -1.02
UPF2-202ENST00000357604 HIST1H2ACQ93077 130 aa8.69□□□□□ -1.02
UPF2-202ENST00000357604 NACC2Q96BF6 587 aa8.69□□□□□ -1.02
UPF2-202ENST00000357604 LRFN5Q96NI6 719 aa8.69□□□□□ -1.02
UPF2-202ENST00000357604 MYCBPQ99417 103 aaPredicted RBP8.69□□□□□ -1.02
UPF2-202ENST00000357604 IL1RL2Q9HB29 575 aa8.69□□□□□ -1.02
UPF2-202ENST00000357604 DHCR7Q9UBM7 475 aaKnown RBP8.69□□□□□ -1.02
UPF2-202ENST00000357604 ZGLP1P0C6A0 271 aa8.69□□□□□ -1.02
UPF2-202ENST00000357604 COMMD6Q7Z4G1 85 aa8.69□□□□□ -1.02
UPF2-202ENST00000357604 PIP4P1Q86T03 277 aa8.69□□□□□ -1.02
UPF2-202ENST00000357604 CA13Q8N1Q1 262 aa8.69□□□□□ -1.02
UPF2-202ENST00000357604 CLHC1Q8NHS4 586 aa8.69□□□□□ -1.02
UPF2-202ENST00000357604 C11orf16Q9NQ32 467 aa8.69□□□□□ -1.02
UPF2-202ENST00000357604 TIGARQ9NQ88 270 aa8.69□□□□□ -1.02
UPF2-202ENST00000357604 PPP4R1LQ9P1A2 415 aa8.69□□□□□ -1.02
UPF2-202ENST00000357604 ANTXRLA6NF34 631 aa8.69□□□□□ -1.02
UPF2-202ENST00000357604 CDX4O14627 284 aaPredicted RBP8.69□□□□□ -1.02
UPF2-202ENST00000357604 ENTPD5O75356 428 aa8.69□□□□□ -1.02
UPF2-202ENST00000357604 ITGA2P17301 1181 aa8.69□□□□□ -1.02
UPF2-202ENST00000357604 OLR1P78380 273 aa8.69□□□□□ -1.02
UPF2-202ENST00000357604 RANBP3LQ86VV4 465 aaPredicted RBP8.69□□□□□ -1.02
UPF2-202ENST00000357604 ZC3H7AQ8IWR0 971 aaKnown RBP8.69□□□□□ -1.02
UPF2-202ENST00000357604 HOPXQ9BPY8 73 aaPredicted RBP8.69□□□□□ -1.02
UPF2-202ENST00000357604 EHD3Q9NZN3 535 aa8.69□□□□□ -1.02
UPF2-202ENST00000357604 B3GALT1Q9Y5Z6 326 aa8.69□□□□□ -1.02
UPF2-202ENST00000357604 OR6A2O95222 327 aa8.69□□□□□ -1.02
UPF2-202ENST00000357604 CPMP14384 443 aa8.69□□□□□ -1.02
UPF2-202ENST00000357604 SLC6A2P23975 617 aa8.69□□□□□ -1.02
UPF2-202ENST00000357604 LIM2P55344 173 aa8.69□□□□□ -1.02
UPF2-202ENST00000357604 HMGCS1Q01581 520 aa8.69□□□□□ -1.02
UPF2-202ENST00000357604 ELAVL1Q15717 326 aaKnown RBP8.69□□□□□ -1.02
UPF2-202ENST00000357604 TMEM214Q6NUQ4 689 aaKnown RBP8.69□□□□□ -1.02
UPF2-202ENST00000357604 ABHD17CQ6PCB6 329 aa8.69□□□□□ -1.02
UPF2-202ENST00000357604 OVCH1Q7RTY7 1134 aa8.69□□□□□ -1.02
UPF2-202ENST00000357604 C9orf43Q8TAL5 461 aaPredicted RBP8.69□□□□□ -1.02
UPF2-202ENST00000357604 WDR34Q96EX3 536 aa8.69□□□□□ -1.02
UPF2-202ENST00000357604 CHST8Q9H2A9 424 aa8.69□□□□□ -1.02
UPF2-202ENST00000357604 TMEM27Q9HBJ8 222 aa8.69□□□□□ -1.02
UPF2-202ENST00000357604 GPR83Q9NYM4 423 aa8.69□□□□□ -1.02
UPF2-202ENST00000357604 PCDHGB7Q9Y5F8 929 aa8.69□□□□□ -1.02
UPF2-202ENST00000357604 PCDHGA3Q9Y5H0 932 aa8.69□□□□□ -1.02
UPF2-202ENST00000357604 SYNGR4O95473 234 aa8.68□□□□□ -1.02
UPF2-202ENST00000357604 CRYABP02511 175 aaKnown RBP8.68□□□□□ -1.02
UPF2-202ENST00000357604 SLC35E2P0CK97 266 aa8.68□□□□□ -1.02
UPF2-202ENST00000357604 ZNF28P17035 718 aa8.68□□□□□ -1.02
UPF2-202ENST00000357604 ITPKBP27987 946 aa8.68□□□□□ -1.02
UPF2-202ENST00000357604 PER3P56645 1201 aa8.68□□□□□ -1.02
UPF2-202ENST00000357604 DLG1Q12959 904 aa8.68□□□□□ -1.02
UPF2-202ENST00000357604 QSOX2Q6ZRP7 698 aa8.68□□□□□ -1.02
UPF2-202ENST00000357604 TICAM1Q8IUC6 712 aa8.68□□□□□ -1.02
UPF2-202ENST00000357604 SLITRK4Q8IW52 837 aa8.68□□□□□ -1.02
UPF2-202ENST00000357604 M1APQ8TC57 530 aa8.68□□□□□ -1.02
UPF2-202ENST00000357604 NSMCE3Q96MG7 304 aa8.68□□□□□ -1.02
UPF2-202ENST00000357604 MS4A4EQ96PG1 132 aa8.68□□□□□ -1.02
UPF2-202ENST00000357604 SPATA9Q9BWV2 254 aa8.68□□□□□ -1.02
UPF2-202ENST00000357604 TAPBPLQ9BX59 468 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms