RNA–Protein interactions for RNA: ENST00000355133.7

SCN8A-202, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best) BASIC

Gene SCN8A, Length 5,820 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-202ENST00000355133 NINJ1Q92982 152 aa12.68□□□□□ -0.38
SCN8A-202ENST00000355133 TRIM43Q96BQ3 446 aaPredicted RBP12.68□□□□□ -0.38
SCN8A-202ENST00000355133 TMEM165Q9HC07 324 aa12.68□□□□□ -0.38
SCN8A-202ENST00000355133 UNC119BA6NIH7 251 aa12.68□□□□□ -0.38
SCN8A-202ENST00000355133 RTCAO00442 366 aaKnown RBP12.68□□□□□ -0.38
SCN8A-202ENST00000355133 TSPAN4O14817 238 aa12.68□□□□□ -0.38
SCN8A-202ENST00000355133 PEPDP12955 493 aa12.68□□□□□ -0.38
SCN8A-202ENST00000355133 EIF2S3P41091 472 aaKnown RBP12.68□□□□□ -0.38
SCN8A-202ENST00000355133 SELENOVP59797 346 aa12.68□□□□□ -0.38
SCN8A-202ENST00000355133 FAM189A2Q15884 450 aa12.68□□□□□ -0.38
SCN8A-202ENST00000355133 EXOC3L2Q2M3D2 409 aa12.68□□□□□ -0.38
SCN8A-202ENST00000355133 OGFRL1Q5TC84 451 aaPredicted RBP12.68□□□□□ -0.38
SCN8A-202ENST00000355133 SLC39A5Q6ZMH5 540 aa12.68□□□□□ -0.38
SCN8A-202ENST00000355133 CASTOR1Q8WTX7 329 aa12.68□□□□□ -0.38
SCN8A-202ENST00000355133 GMLQ99445 158 aa12.68□□□□□ -0.38
SCN8A-202ENST00000355133 ENY2Q9NPA8 101 aa12.68□□□□□ -0.38
SCN8A-202ENST00000355133 ABCD2Q9UBJ2 740 aa12.68□□□□□ -0.38
SCN8A-202ENST00000355133 ATXN7L1Q9ULK2 861 aaPredicted RBP12.68□□□□□ -0.38
SCN8A-202ENST00000355133 COL14A1Q05707 1796 aaKnown RBP12.68□□□□□ -0.38
SCN8A-202ENST00000355133 A0A096LPI6 279 aa12.68□□□□□ -0.38
SCN8A-202ENST00000355133 BHMG1C9JSJ3 638 aaPredicted RBP12.68□□□□□ -0.38
SCN8A-202ENST00000355133 FAM227AF5H4B4 570 aa12.68□□□□□ -0.38
SCN8A-202ENST00000355133 LATO43561 262 aa12.68□□□□□ -0.38
SCN8A-202ENST00000355133 SDC3O75056 442 aa12.68□□□□□ -0.38
SCN8A-202ENST00000355133 S100A1P23297 94 aa12.68□□□□□ -0.38
SCN8A-202ENST00000355133 F8A1P23610 371 aa12.68□□□□□ -0.38
SCN8A-202ENST00000355133 NAA10P41227 235 aaPredicted RBP12.68□□□□□ -0.38
SCN8A-202ENST00000355133 LBX1P52954 281 aa12.68□□□□□ -0.38
SCN8A-202ENST00000355133 RUNX3Q13761 415 aa12.68□□□□□ -0.38
SCN8A-202ENST00000355133 CST6Q15828 149 aa12.68□□□□□ -0.38
SCN8A-202ENST00000355133 UNC50Q53HI1 259 aa12.68□□□□□ -0.38
SCN8A-202ENST00000355133 ZFAND4Q86XD8 727 aa12.68□□□□□ -0.38
SCN8A-202ENST00000355133 LMO3Q8TAP4 145 aa12.68□□□□□ -0.38
SCN8A-202ENST00000355133 FBXL3Q9UKT7 428 aa12.68□□□□□ -0.38
SCN8A-202ENST00000355133 ALG5Q9Y673 324 aa12.68□□□□□ -0.38
SCN8A-202ENST00000355133 PEAK1Q9H792 1746 aa12.68□□□□□ -0.38
SCN8A-202ENST00000355133 H2BFMP0C1H6 154 aa12.68□□□□□ -0.38
SCN8A-202ENST00000355133 CD70P32970 193 aa12.68□□□□□ -0.38
SCN8A-202ENST00000355133 SHQ1Q6PI26 577 aaKnown RBP12.68□□□□□ -0.38
SCN8A-202ENST00000355133 LRRC25Q8N386 305 aaPredicted RBP12.68□□□□□ -0.38
SCN8A-202ENST00000355133 SLC44A3Q8N4M1 653 aa12.68□□□□□ -0.38
SCN8A-202ENST00000355133 FBXL8Q96CD0 374 aa12.68□□□□□ -0.38
SCN8A-202ENST00000355133 VRTNQ9H8Y1 702 aa12.68□□□□□ -0.38
SCN8A-202ENST00000355133 OR5K4A6NMS3 321 aa12.67□□□□□ -0.38
SCN8A-202ENST00000355133 CKMT1AP12532 417 aa12.67□□□□□ -0.38
SCN8A-202ENST00000355133 BCKDHAP12694 445 aa12.67□□□□□ -0.38
SCN8A-202ENST00000355133 SLC15A1P46059 708 aa12.67□□□□□ -0.38
SCN8A-202ENST00000355133 DEFA5Q01523 94 aa12.67□□□□□ -0.38
SCN8A-202ENST00000355133 DOC2AQ14183 400 aa12.67□□□□□ -0.38
SCN8A-202ENST00000355133 ZSCAN1Q8NBB4 408 aa12.67□□□□□ -0.38
SCN8A-202ENST00000355133 SHISA4Q96DD7 197 aa12.67□□□□□ -0.38
SCN8A-202ENST00000355133 DPH2Q9BQC3 489 aaPredicted RBP12.67□□□□□ -0.38
SCN8A-202ENST00000355133 ZNF471Q9BX82 626 aaPredicted RBP12.67□□□□□ -0.38
SCN8A-202ENST00000355133 NUDT15Q9NV35 164 aa12.67□□□□□ -0.38
SCN8A-202ENST00000355133 A0A1W2PPK0 400 aa12.67□□□□□ -0.38
SCN8A-202ENST00000355133 DISC1C4P0D8 188 aa12.67□□□□□ -0.38
SCN8A-202ENST00000355133 S1PR1P21453 382 aa12.67□□□□□ -0.38
SCN8A-202ENST00000355133 LHCGRP22888 699 aa12.67□□□□□ -0.38
SCN8A-202ENST00000355133 FXYD6P3P58550 94 aa12.67□□□□□ -0.38
SCN8A-202ENST00000355133 HNRNPA0Q13151 305 aaKnown RBP12.67□□□□□ -0.38
SCN8A-202ENST00000355133 FAM69BQ5VUD6 431 aa12.67□□□□□ -0.38
SCN8A-202ENST00000355133 RAET1LQ5VY80 246 aa12.67□□□□□ -0.38
SCN8A-202ENST00000355133 SYCE2Q6PIF2 218 aa12.67□□□□□ -0.38
SCN8A-202ENST00000355133 UBE2Q1Q7Z7E8 422 aa12.67□□□□□ -0.38
SCN8A-202ENST00000355133 SLC22A16Q86VW1 577 aa12.67□□□□□ -0.38
SCN8A-202ENST00000355133 ZSWIM9Q86XI8 627 aa12.67□□□□□ -0.38
SCN8A-202ENST00000355133 PDSS2Q86YH6 399 aa12.67□□□□□ -0.38
SCN8A-202ENST00000355133 SLC37A3Q8NCC5 494 aa12.67□□□□□ -0.38
SCN8A-202ENST00000355133 GALNT11Q8NCW6 608 aa12.67□□□□□ -0.38
SCN8A-202ENST00000355133 ZNF689Q96CS4 500 aaPredicted RBP12.67□□□□□ -0.38
SCN8A-202ENST00000355133 ENAMQ9NRM1 1142 aa12.67□□□□□ -0.38
SCN8A-202ENST00000355133 SH2B3Q9UQQ2 575 aa12.67□□□□□ -0.38
SCN8A-202ENST00000355133 LSM1O15116 133 aaKnown RBP12.67□□□□□ -0.38
SCN8A-202ENST00000355133 ALDOAP04075 364 aaKnown RBP12.67□□□□□ -0.38
SCN8A-202ENST00000355133 SLC10A3P09131 477 aa12.67□□□□□ -0.38
SCN8A-202ENST00000355133 ZNF761Q86XN6 746 aaPredicted RBP12.67□□□□□ -0.38
SCN8A-202ENST00000355133 NLGN4XQ8N0W4 816 aa12.67□□□□□ -0.38
SCN8A-202ENST00000355133 CNIH3Q8TBE1 160 aa12.67□□□□□ -0.38
SCN8A-202ENST00000355133 BORCS6Q96GS4 357 aa12.67□□□□□ -0.38
SCN8A-202ENST00000355133 ERVK-18Q9QC07 812 aa12.67□□□□□ -0.38
SCN8A-202ENST00000355133 ZNF451Q9Y4E5 1061 aa12.67□□□□□ -0.38
SCN8A-202ENST00000355133 ABCC6O95255 1503 aa12.67□□□□□ -0.38
SCN8A-202ENST00000355133 C1orf226A1L170 272 aa12.67□□□□□ -0.38
SCN8A-202ENST00000355133 SOCS2O14508 198 aa12.67□□□□□ -0.38
SCN8A-202ENST00000355133 SDHDO14521 159 aa12.67□□□□□ -0.38
SCN8A-202ENST00000355133 FLRT2O43155 660 aa12.67□□□□□ -0.38
SCN8A-202ENST00000355133 ZNF865P0CJ78 1059 aaPredicted RBP12.67□□□□□ -0.38
SCN8A-202ENST00000355133 HRH2P25021 359 aa12.67□□□□□ -0.38
SCN8A-202ENST00000355133 GRPRP30550 384 aa12.67□□□□□ -0.38
SCN8A-202ENST00000355133 ZNF84P51523 738 aa12.67□□□□□ -0.38
SCN8A-202ENST00000355133 C18orf21Q32NC0 220 aaPredicted RBP12.67□□□□□ -0.38
SCN8A-202ENST00000355133 CRTC1Q6UUV9 634 aa12.67□□□□□ -0.38
SCN8A-202ENST00000355133 NXPE4Q6UWF7 544 aa12.67□□□□□ -0.38
SCN8A-202ENST00000355133 TSPAN33Q86UF1 283 aa12.67□□□□□ -0.38
SCN8A-202ENST00000355133 LIN28AQ9H9Z2 209 aaKnown RBP12.67□□□□□ -0.38
SCN8A-202ENST00000355133 SRA1Q9HD15 236 aaKnown RBP12.67□□□□□ -0.38
SCN8A-202ENST00000355133 TAS2R10Q9NYW0 307 aa12.67□□□□□ -0.38
SCN8A-202ENST00000355133 PIAS3Q9Y6X2 628 aa12.67□□□□□ -0.38
SCN8A-202ENST00000355133 JUPP14923 745 aa12.66□□□□□ -0.38
SCN8A-202ENST00000355133 ARSFP54793 590 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms