RNA–Protein interactions for RNA: ENST00000354848.5

CD46-203, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,233 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-203ENST00000354848 ZCCHC4Q9H5U6 513 aa7.51□□□□□ -1.21
CD46-203ENST00000354848 NUDT15Q9NV35 164 aa7.51□□□□□ -1.21
CD46-203ENST00000354848 HS3ST4Q9Y661 456 aa7.51□□□□□ -1.21
CD46-203ENST00000354848 EP400Q96L91 3159 aa7.51□□□□□ -1.21
CD46-203ENST00000354848 LOC105369274A0A096LPK9 316 aa7.51□□□□□ -1.21
CD46-203ENST00000354848 FAM170BA6NMN3 283 aa7.51□□□□□ -1.21
CD46-203ENST00000354848 A8MXK9 166 aa7.51□□□□□ -1.21
CD46-203ENST00000354848 TLR4O00206 839 aa7.51□□□□□ -1.21
CD46-203ENST00000354848 SLC30A4O14863 429 aa7.51□□□□□ -1.21
CD46-203ENST00000354848 CASKO14936 926 aa7.51□□□□□ -1.21
CD46-203ENST00000354848 HMGN1P05114 100 aa7.51□□□□□ -1.21
CD46-203ENST00000354848 HMBSP08397 361 aa7.51□□□□□ -1.21
CD46-203ENST00000354848 CD9P21926 228 aa7.51□□□□□ -1.21
CD46-203ENST00000354848 HLA-FP30511 346 aa7.51□□□□□ -1.21
CD46-203ENST00000354848 DCDC1P59894 354 aa7.51□□□□□ -1.21
CD46-203ENST00000354848 ZXDBP98169 803 aa7.51□□□□□ -1.21
CD46-203ENST00000354848 SCRN3Q0VDG4 424 aa7.51□□□□□ -1.21
CD46-203ENST00000354848 ADAM15Q13444 863 aa7.51□□□□□ -1.21
CD46-203ENST00000354848 MSANTD1Q6ZTZ1 278 aa7.51□□□□□ -1.21
CD46-203ENST00000354848 RRM2BQ7LG56 351 aa7.51□□□□□ -1.21
CD46-203ENST00000354848 WDR53Q7Z5U6 358 aaPredicted RBP7.51□□□□□ -1.21
CD46-203ENST00000354848 BCDIN3DQ7Z5W3 292 aaKnown RBP7.51□□□□□ -1.21
CD46-203ENST00000354848 PM20D2Q8IYS1 436 aa7.51□□□□□ -1.21
CD46-203ENST00000354848 OR4N4Q8N0Y3 316 aa7.51□□□□□ -1.21
CD46-203ENST00000354848 BMPERQ8N8U9 685 aa7.51□□□□□ -1.21
CD46-203ENST00000354848 AQP11Q8NBQ7 271 aa7.51□□□□□ -1.21
CD46-203ENST00000354848 MDGA1Q8NFP4 955 aa7.51□□□□□ -1.21
CD46-203ENST00000354848 SMG7Q92540 1137 aaKnown RBP7.51□□□□□ -1.21
CD46-203ENST00000354848 KCNJ9Q92806 393 aa7.51□□□□□ -1.21
CD46-203ENST00000354848 MS4A3Q96HJ5 214 aa7.51□□□□□ -1.21
CD46-203ENST00000354848 AHCYL2Q96HN2 611 aaKnown RBP7.51□□□□□ -1.21
CD46-203ENST00000354848 SERPINB11Q96P15 392 aa7.51□□□□□ -1.21
CD46-203ENST00000354848 SECISBP2Q96T21 854 aaKnown RBP7.51□□□□□ -1.21
CD46-203ENST00000354848 DPYSL5Q9BPU6 564 aa7.51□□□□□ -1.21
CD46-203ENST00000354848 SEC22CQ9BRL7 303 aa7.51□□□□□ -1.21
CD46-203ENST00000354848 ABCG5Q9H222 651 aa7.51□□□□□ -1.21
CD46-203ENST00000354848 TPT1P8Q9HAU6 139 aa7.51□□□□□ -1.21
CD46-203ENST00000354848 BRD7Q9NPI1 651 aa7.51□□□□□ -1.21
CD46-203ENST00000354848 SLAMF7Q9NQ25 335 aa7.51□□□□□ -1.21
CD46-203ENST00000354848 DLL4Q9NR61 685 aa7.51□□□□□ -1.21
CD46-203ENST00000354848 TRPS1Q9UHF7 1281 aa7.51□□□□□ -1.21
CD46-203ENST00000354848 HCN2Q9UL51 889 aa7.51□□□□□ -1.21
CD46-203ENST00000354848 FZD4Q9ULV1 537 aa7.51□□□□□ -1.21
CD46-203ENST00000354848 SF3B6Q9Y3B4 125 aaKnown RBP7.51□□□□□ -1.21
CD46-203ENST00000354848 TTC3P53804 2025 aa7.51□□□□□ -1.21
CD46-203ENST00000354848 TNS1Q9HBL0 1735 aaKnown RBP7.51□□□□□ -1.21
CD46-203ENST00000354848 TRPM7Q96QT4 1865 aa7.51□□□□□ -1.21
CD46-203ENST00000354848 PRSS44E7EML9 344 aa7.5□□□□□ -1.21
CD46-203ENST00000354848 SYN3O14994 580 aa7.5□□□□□ -1.21
CD46-203ENST00000354848 NBNO60934 754 aa7.5□□□□□ -1.21
CD46-203ENST00000354848 SCN2BO60939 215 aa7.5□□□□□ -1.21
CD46-203ENST00000354848 ADAM11O75078 769 aa7.5□□□□□ -1.21
CD46-203ENST00000354848 NCR1O76036 304 aa7.5□□□□□ -1.21
CD46-203ENST00000354848 PLATP00750 562 aa7.5□□□□□ -1.21
CD46-203ENST00000354848 PDYNP01213 254 aa7.5□□□□□ -1.21
CD46-203ENST00000354848 GASTP01350 101 aa7.5□□□□□ -1.21
CD46-203ENST00000354848 FOSL1P15407 271 aa7.5□□□□□ -1.21
CD46-203ENST00000354848 PCSK2P16519 638 aa7.5□□□□□ -1.21
CD46-203ENST00000354848 HOXA1P49639 335 aaPredicted RBP7.5□□□□□ -1.21
CD46-203ENST00000354848 AKR1D1P51857 326 aa7.5□□□□□ -1.21
CD46-203ENST00000354848 AP1S2P56377 157 aa7.5□□□□□ -1.21
CD46-203ENST00000354848 WNT3P56703 355 aa7.5□□□□□ -1.21
CD46-203ENST00000354848 SNRPGP62308 76 aaKnown RBP7.5□□□□□ -1.21
CD46-203ENST00000354848 RIPPLY1Q0D2K3 151 aa7.5□□□□□ -1.21
CD46-203ENST00000354848 MTAPQ13126 283 aa7.5□□□□□ -1.21
CD46-203ENST00000354848 CPSF6Q16630 551 aaKnown RBP eCLIP7.5□□□□□ -1.212e-7■■□□□ 13.3
CD46-203ENST00000354848 ARHGAP15Q53QZ3 475 aa7.5□□□□□ -1.21
CD46-203ENST00000354848 RNLSQ5VYX0 342 aa7.5□□□□□ -1.21
CD46-203ENST00000354848 RGS7BPQ6MZT1 257 aaPredicted RBP7.5□□□□□ -1.21
CD46-203ENST00000354848 ATRAIDQ6UW56 229 aa7.5□□□□□ -1.21
CD46-203ENST00000354848 CLECL1Q8IZS7 167 aa7.5□□□□□ -1.21
CD46-203ENST00000354848 UMODL1-AS1Q8N2C9 162 aa7.5□□□□□ -1.21
CD46-203ENST00000354848 PIAS4Q8N2W9 510 aaPredicted RBP7.5□□□□□ -1.21
CD46-203ENST00000354848 KCT2Q8NC54 265 aa7.5□□□□□ -1.21
CD46-203ENST00000354848 MTMR14Q8NCE2 650 aa7.5□□□□□ -1.21
CD46-203ENST00000354848 TCF25Q9BQ70 676 aa7.5□□□□□ -1.21
CD46-203ENST00000354848 CHST8Q9H2A9 424 aa7.5□□□□□ -1.21
CD46-203ENST00000354848 ACER3Q9NUN7 267 aa7.5□□□□□ -1.21
CD46-203ENST00000354848 TRPM5Q9NZQ8 1165 aa7.5□□□□□ -1.21
CD46-203ENST00000354848 RPL36Q9Y3U8 105 aaKnown RBP7.5□□□□□ -1.21
CD46-203ENST00000354848 PLXNA4Q9HCM2 1894 aa7.5□□□□□ -1.21
CD46-203ENST00000354848 MEIKINA0A087WXM9 373 aa7.5□□□□□ -1.21
CD46-203ENST00000354848 A0A1B0GVI7 797 aa7.5□□□□□ -1.21
CD46-203ENST00000354848 G3V3Q6 166 aa7.5□□□□□ -1.21
CD46-203ENST00000354848 GPR171O14626 319 aa7.5□□□□□ -1.21
CD46-203ENST00000354848 SGTAO43765 313 aa7.5□□□□□ -1.21
CD46-203ENST00000354848 TOXO94900 526 aa7.5□□□□□ -1.21
CD46-203ENST00000354848 C1SP09871 688 aa7.5□□□□□ -1.21
CD46-203ENST00000354848 EBLN1P0CF75 366 aa7.5□□□□□ -1.21
CD46-203ENST00000354848 ZNF865P0CJ78 1059 aaPredicted RBP7.5□□□□□ -1.21
CD46-203ENST00000354848 DARSP14868 501 aaKnown RBP7.5□□□□□ -1.21
CD46-203ENST00000354848 ACPPP15309 386 aa7.5□□□□□ -1.21
CD46-203ENST00000354848 FABP5Q01469 135 aa7.5□□□□□ -1.21
CD46-203ENST00000354848 CSTF1Q05048 431 aaKnown RBP7.5□□□□□ -1.21
CD46-203ENST00000354848 TMEM201Q5SNT2 666 aa7.5□□□□□ -1.21
CD46-203ENST00000354848 ATAT1Q5SQI0 421 aa7.5□□□□□ -1.21
CD46-203ENST00000354848 QSOX2Q6ZRP7 698 aa7.5□□□□□ -1.21
CD46-203ENST00000354848 LAPTM4BQ86VI4 370 aa7.5□□□□□ -1.21
CD46-203ENST00000354848 FTMTQ8N4E7 242 aa7.5□□□□□ -1.21
CD46-203ENST00000354848 OR4A15Q8NGL6 344 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms