RNA–Protein interactions for RNA: ENST00000352818.8

CD44-205, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-205ENST00000352818 RNF215Q9Y6U7 377 aa7.82□□□□□ -1.16
CD44-205ENST00000352818 A0A1W2PQU0 124 aa7.81□□□□□ -1.16
CD44-205ENST00000352818 KRT87PA6NCN2 255 aa7.81□□□□□ -1.16
CD44-205ENST00000352818 PRSS44E7EML9 344 aa7.81□□□□□ -1.16
CD44-205ENST00000352818 LMO7DNF2Z398 122 aa7.81□□□□□ -1.16
CD44-205ENST00000352818 YY2O15391 372 aa7.81□□□□□ -1.16
CD44-205ENST00000352818 CAPN5O15484 640 aaPredicted RBP7.81□□□□□ -1.16
CD44-205ENST00000352818 DNAJB5O75953 348 aa7.81□□□□□ -1.16
CD44-205ENST00000352818 MYO1DO94832 1006 aa7.81□□□□□ -1.16
CD44-205ENST00000352818 SCELO95171 688 aa7.81□□□□□ -1.16
CD44-205ENST00000352818 PCCBP05166 539 aa7.81□□□□□ -1.16
CD44-205ENST00000352818 ANXA6P08133 673 aa7.81□□□□□ -1.16
CD44-205ENST00000352818 HOXC4P09017 264 aaPredicted RBP7.81□□□□□ -1.16
CD44-205ENST00000352818 CDH1P12830 882 aa7.81□□□□□ -1.16
CD44-205ENST00000352818 NPPBP16860 134 aa7.81□□□□□ -1.16
CD44-205ENST00000352818 ZNF26P17031 533 aaPredicted RBP7.81□□□□□ -1.16
CD44-205ENST00000352818 JUNDP17535 347 aa7.81□□□□□ -1.16
CD44-205ENST00000352818 F8A1P23610 371 aa7.81□□□□□ -1.16
CD44-205ENST00000352818 FASP25445 335 aa7.81□□□□□ -1.16
CD44-205ENST00000352818 GZMMP51124 257 aa7.81□□□□□ -1.16
CD44-205ENST00000352818 NEK2P51955 445 aa7.81□□□□□ -1.16
CD44-205ENST00000352818 OR4D2P58180 307 aa7.81□□□□□ -1.16
CD44-205ENST00000352818 PHEXP78562 749 aa7.81□□□□□ -1.16
CD44-205ENST00000352818 FOLH1Q04609 750 aa7.81□□□□□ -1.16
CD44-205ENST00000352818 ACSM2AQ08AH3 577 aa7.81□□□□□ -1.16
CD44-205ENST00000352818 SELPLGQ14242 412 aa7.81□□□□□ -1.16
CD44-205ENST00000352818 NFE2L1Q14494 772 aa7.81□□□□□ -1.16
CD44-205ENST00000352818 IRF4Q15306 451 aa7.81□□□□□ -1.16
CD44-205ENST00000352818 CYP2A13Q16696 494 aa7.81□□□□□ -1.16
CD44-205ENST00000352818 HIST2H2ACQ16777 129 aaPredicted RBP7.81□□□□□ -1.16
CD44-205ENST00000352818 LRRC36Q1X8D7 754 aa7.81□□□□□ -1.16
CD44-205ENST00000352818 PRAMEF13Q5VWM6 474 aa7.81□□□□□ -1.16
CD44-205ENST00000352818 ACSM2BQ68CK6 577 aa7.81□□□□□ -1.16
CD44-205ENST00000352818 HIST2H2AA3Q6FI13 130 aa7.81□□□□□ -1.16
CD44-205ENST00000352818 PPP4R4Q6NUP7 873 aa7.81□□□□□ -1.16
CD44-205ENST00000352818 FAM83HQ6ZRV2 1179 aaPredicted RBP7.81□□□□□ -1.16
CD44-205ENST00000352818 SPPL2CQ8IUH8 684 aa7.81□□□□□ -1.16
CD44-205ENST00000352818 SYTL1Q8IYJ3 562 aa7.81□□□□□ -1.16
CD44-205ENST00000352818 DENND6BQ8NEG7 585 aa7.81□□□□□ -1.16
CD44-205ENST00000352818 OR5K2Q8NHB8 316 aa7.81□□□□□ -1.16
CD44-205ENST00000352818 SLC5A11Q8WWX8 675 aa7.81□□□□□ -1.16
CD44-205ENST00000352818 EME1Q96AY2 570 aa7.81□□□□□ -1.16
CD44-205ENST00000352818 MTFMTQ96DP5 389 aaKnown RBP7.81□□□□□ -1.16
CD44-205ENST00000352818 CENPNQ96H22 339 aaPredicted RBP7.81□□□□□ -1.16
CD44-205ENST00000352818 NSMCE2Q96MF7 247 aa7.81□□□□□ -1.16
CD44-205ENST00000352818 PPM1MQ96MI6 270 aa7.81□□□□□ -1.16
CD44-205ENST00000352818 ZNF583Q96ND8 569 aa7.81□□□□□ -1.16
CD44-205ENST00000352818 CMKLR1Q99788 373 aa7.81□□□□□ -1.16
CD44-205ENST00000352818 LRRC61Q9BV99 259 aa7.81□□□□□ -1.16
CD44-205ENST00000352818 SPATA9Q9BWV2 254 aa7.81□□□□□ -1.16
CD44-205ENST00000352818 OSBPL11Q9BXB4 747 aa7.81□□□□□ -1.16
CD44-205ENST00000352818 PCBD2Q9H0N5 130 aa7.81□□□□□ -1.16
CD44-205ENST00000352818 RPF2Q9H7B2 306 aaKnown RBP7.81□□□□□ -1.16
CD44-205ENST00000352818 KAT8Q9H7Z6 458 aaKnown RBP7.81□□□□□ -1.16
CD44-205ENST00000352818 DMRT3Q9NQL9 472 aa7.81□□□□□ -1.16
CD44-205ENST00000352818 OLAHQ9NV23 265 aa7.81□□□□□ -1.16
CD44-205ENST00000352818 PDP2Q9P2J9 529 aa7.81□□□□□ -1.16
CD44-205ENST00000352818 EGFL7Q9UHF1 273 aa7.81□□□□□ -1.16
CD44-205ENST00000352818 BTNL2Q9UIR0 455 aa7.81□□□□□ -1.16
CD44-205ENST00000352818 PILRAQ9UKJ1 303 aa7.81□□□□□ -1.16
CD44-205ENST00000352818 ZFR2Q9UPR6 939 aaKnown RBP7.81□□□□□ -1.16
CD44-205ENST00000352818 PCM1Q15154 2024 aa7.8□□□□□ -1.16
CD44-205ENST00000352818 PIPSLA2A3N6 862 aa7.8□□□□□ -1.16
CD44-205ENST00000352818 SCAMP2O15127 329 aaKnown RBP7.8□□□□□ -1.16
CD44-205ENST00000352818 ZG16O60844 167 aa7.8□□□□□ -1.16
CD44-205ENST00000352818 SCN2BO60939 215 aa7.8□□□□□ -1.16
CD44-205ENST00000352818 TIPRLO75663 272 aa7.8□□□□□ -1.16
CD44-205ENST00000352818 SEMA3DO95025 777 aa7.8□□□□□ -1.16
CD44-205ENST00000352818 PCDH8O95206 1070 aa7.8□□□□□ -1.16
CD44-205ENST00000352818 LYNP07948 512 aa7.8□□□□□ -1.16
CD44-205ENST00000352818 ZCCHC18P0CG32 403 aa7.8□□□□□ -1.16
CD44-205ENST00000352818 RAP2AP10114 183 aa7.8□□□□□ -1.16
CD44-205ENST00000352818 CD99P14209 185 aa7.8□□□□□ -1.16
CD44-205ENST00000352818 TACR1P25103 407 aa7.8□□□□□ -1.16
CD44-205ENST00000352818 TIA1P31483 386 aaKnown RBP eCLIP7.8□□□□□ -1.16
CD44-205ENST00000352818 PTGER4P35408 488 aa7.8□□□□□ -1.16
CD44-205ENST00000352818 HPCAL1P37235 193 aa7.8□□□□□ -1.16
CD44-205ENST00000352818 RPL3P39023 403 aaKnown RBP7.8□□□□□ -1.16
CD44-205ENST00000352818 KIR3DL1P43629 444 aa7.8□□□□□ -1.16
CD44-205ENST00000352818 MTPNP58546 118 aa7.8□□□□□ -1.16
CD44-205ENST00000352818 PHC1P78364 1004 aa7.8□□□□□ -1.16
CD44-205ENST00000352818 RAE1P78406 368 aaKnown RBP7.8□□□□□ -1.16
CD44-205ENST00000352818 ABHD18Q0P651 414 aa7.8□□□□□ -1.16
CD44-205ENST00000352818 SLBPQ14493 270 aaKnown RBP eCLIP7.8□□□□□ -1.16
CD44-205ENST00000352818 ATP6AP1Q15904 470 aa7.8□□□□□ -1.16
CD44-205ENST00000352818 CYP51A1Q16850 503 aa7.8□□□□□ -1.16
CD44-205ENST00000352818 UGT8Q16880 541 aa7.8□□□□□ -1.16
CD44-205ENST00000352818 CRTC2Q53ET0 693 aaPredicted RBP7.8□□□□□ -1.16
CD44-205ENST00000352818 IKBIPQ70UQ0 350 aa7.8□□□□□ -1.16
CD44-205ENST00000352818 CXXC5Q7LFL8 322 aaKnown RBP7.8□□□□□ -1.16
CD44-205ENST00000352818 SPRED1Q7Z699 444 aa7.8□□□□□ -1.16
CD44-205ENST00000352818 TMPRSS11BQ86T26 416 aa7.8□□□□□ -1.16
CD44-205ENST00000352818 CDH24Q86UP0 819 aa7.8□□□□□ -1.16
CD44-205ENST00000352818 GPR180Q86V85 440 aa7.8□□□□□ -1.16
CD44-205ENST00000352818 PARGQ86W56 976 aa7.8□□□□□ -1.16
CD44-205ENST00000352818 HORMAD1Q86X24 394 aa7.8□□□□□ -1.16
CD44-205ENST00000352818 SFTPA2Q8IWL1 248 aa7.8□□□□□ -1.16
CD44-205ENST00000352818 CHERPQ8IWX8 916 aaKnown RBP7.8□□□□□ -1.16
CD44-205ENST00000352818 MICU2Q8IYU8 434 aa7.8□□□□□ -1.16
CD44-205ENST00000352818 KRT78Q8N1N4 520 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms