RNA–Protein interactions for RNA: ENST00000347615.6

SMG7-201, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMG7, Length 5,788 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-201ENST00000347615 ELOA3BQ3SY89 546 aa10.05□□□□□ -0.8
SMG7-201ENST00000347615 CLLU1OSQ5K130 101 aa10.05□□□□□ -0.8
SMG7-201ENST00000347615 CCSAPQ6IQ19 270 aaPredicted RBP10.05□□□□□ -0.8
SMG7-201ENST00000347615 NCEH1Q6PIU2 408 aa10.05□□□□□ -0.8
SMG7-201ENST00000347615 ZSWIM9Q86XI8 627 aa10.05□□□□□ -0.8
SMG7-201ENST00000347615 ZNF676Q8N7Q3 588 aa10.05□□□□□ -0.8
SMG7-201ENST00000347615 ELOA3Q8NG57 546 aa10.05□□□□□ -0.8
SMG7-201ENST00000347615 MSLNLQ96KJ4 702 aa10.05□□□□□ -0.8
SMG7-201ENST00000347615 TUBA1CQ9BQE3 449 aa10.05□□□□□ -0.8
SMG7-201ENST00000347615 ACPTQ9BZG2 426 aa10.05□□□□□ -0.8
SMG7-201ENST00000347615 CENPMQ9NSP4 180 aa10.05□□□□□ -0.8
SMG7-201ENST00000347615 TBCCD1Q9NVR7 557 aa10.05□□□□□ -0.8
SMG7-201ENST00000347615 CNOT11Q9UKZ1 510 aaKnown RBP10.05□□□□□ -0.8
SMG7-201ENST00000347615 GMEB1Q9Y692 573 aa10.05□□□□□ -0.8
SMG7-201ENST00000347615 DDX60Q8IY21 1712 aaKnown RBP10.05□□□□□ -0.8
SMG7-201ENST00000347615 CRYBG1Q9Y4K1 1723 aa10.05□□□□□ -0.8
SMG7-201ENST00000347615 MYH14Q7Z406 1995 aaKnown RBP10.05□□□□□ -0.8
SMG7-201ENST00000347615 COL2A1P02458 1487 aaPredicted RBP10.05□□□□□ -0.8
SMG7-201ENST00000347615 EPOP01588 193 aa10.05□□□□□ -0.8
SMG7-201ENST00000347615 SLC10A3P09131 477 aa10.05□□□□□ -0.8
SMG7-201ENST00000347615 ZNF865P0CJ78 1059 aaPredicted RBP10.05□□□□□ -0.8
SMG7-201ENST00000347615 GIMD1P0DJR0 217 aa10.05□□□□□ -0.8
SMG7-201ENST00000347615 TGFBR2P37173 567 aa10.05□□□□□ -0.8
SMG7-201ENST00000347615 SGSHP51688 502 aa10.05□□□□□ -0.8
SMG7-201ENST00000347615 CBLBQ13191 982 aa10.05□□□□□ -0.8
SMG7-201ENST00000347615 FBXO43Q4G163 708 aa10.05□□□□□ -0.8
SMG7-201ENST00000347615 PKDCCQ504Y2 493 aa10.05□□□□□ -0.8
SMG7-201ENST00000347615 ASCC1Q8N9N2 400 aaKnown RBP10.05□□□□□ -0.8
SMG7-201ENST00000347615 OR52E4Q8NGH9 312 aa10.05□□□□□ -0.8
SMG7-201ENST00000347615 GRPEL2Q8TAA5 225 aa10.05□□□□□ -0.8
SMG7-201ENST00000347615 NEK7Q8TDX7 302 aa10.05□□□□□ -0.8
SMG7-201ENST00000347615 KXD1Q9BQD3 176 aa10.05□□□□□ -0.8
SMG7-201ENST00000347615 TDP1Q9NUW8 608 aa10.05□□□□□ -0.8
SMG7-201ENST00000347615 FBXL21Q9UKT6 434 aa10.05□□□□□ -0.8
SMG7-201ENST00000347615 CDH7Q9ULB5 785 aa10.05□□□□□ -0.8
SMG7-201ENST00000347615 FAM171A2A8MVW0 826 aa10.04□□□□□ -0.8
SMG7-201ENST00000347615 B4DGG1 531 aa10.04□□□□□ -0.8
SMG7-201ENST00000347615 AKAP8O43823 692 aaKnown RBP10.04□□□□□ -0.8
SMG7-201ENST00000347615 CDKN2CP42773 168 aa10.04□□□□□ -0.8
SMG7-201ENST00000347615 PNLIPRP1P54315 467 aa10.04□□□□□ -0.8
SMG7-201ENST00000347615 PDGFRLQ15198 375 aa10.04□□□□□ -0.8
SMG7-201ENST00000347615 SPHARQ15513 63 aa10.04□□□□□ -0.8
SMG7-201ENST00000347615 CRTC1Q6UUV9 634 aa10.04□□□□□ -0.8
SMG7-201ENST00000347615 HACD2Q6Y1H2 254 aa10.04□□□□□ -0.8
SMG7-201ENST00000347615 FAM92BQ6ZTR7 304 aa10.04□□□□□ -0.8
SMG7-201ENST00000347615 YIPF7Q8N8F6 280 aa10.04□□□□□ -0.8
SMG7-201ENST00000347615 ZNF615Q8N8J6 731 aa10.04□□□□□ -0.8
SMG7-201ENST00000347615 OR2L5Q8NG80 312 aa10.04□□□□□ -0.8
SMG7-201ENST00000347615 C9orf43Q8TAL5 461 aaPredicted RBP10.04□□□□□ -0.8
SMG7-201ENST00000347615 LKAAEAR1Q8TD35 194 aa10.04□□□□□ -0.8
SMG7-201ENST00000347615 C17orf50Q8WW18 174 aa10.04□□□□□ -0.8
SMG7-201ENST00000347615 SGCDQ92629 289 aa10.04□□□□□ -0.8
SMG7-201ENST00000347615 POP5Q969H6 163 aaKnown RBP10.04□□□□□ -0.8
SMG7-201ENST00000347615 ADAD1Q96M93 576 aaKnown RBP10.04□□□□□ -0.8
SMG7-201ENST00000347615 NLGN3Q9NZ94 848 aa10.04□□□□□ -0.8
SMG7-201ENST00000347615 HCN2Q9UL51 889 aa10.04□□□□□ -0.8
SMG7-201ENST00000347615 ATXN7L1Q9ULK2 861 aaPredicted RBP10.04□□□□□ -0.8
SMG7-201ENST00000347615 OR1A2Q9Y585 309 aa10.04□□□□□ -0.8
SMG7-201ENST00000347615 SCAMP2O15127 329 aaKnown RBP10.04□□□□□ -0.8
SMG7-201ENST00000347615 PROM1O43490 865 aa10.04□□□□□ -0.8
SMG7-201ENST00000347615 NCR1O76036 304 aa10.04□□□□□ -0.8
SMG7-201ENST00000347615 CBSLP0DN79 551 aa10.04□□□□□ -0.8
SMG7-201ENST00000347615 DRD5P21918 477 aa10.04□□□□□ -0.8
SMG7-201ENST00000347615 CBSP35520 551 aa10.04□□□□□ -0.8
SMG7-201ENST00000347615 CRISP1P54107 249 aa10.04□□□□□ -0.8
SMG7-201ENST00000347615 ERVK-21P61565 698 aa10.04□□□□□ -0.8
SMG7-201ENST00000347615 ZNF542PQ5EBM4 170 aa10.04□□□□□ -0.8
SMG7-201ENST00000347615 TMEM207Q6UWW9 146 aa10.04□□□□□ -0.8
SMG7-201ENST00000347615 BCDIN3DQ7Z5W3 292 aaKnown RBP10.04□□□□□ -0.8
SMG7-201ENST00000347615 PIAS4Q8N2W9 510 aaPredicted RBP10.04□□□□□ -0.8
SMG7-201ENST00000347615 GPR26Q8NDV2 337 aa10.04□□□□□ -0.8
SMG7-201ENST00000347615 HMGB4Q8WW32 186 aa10.04□□□□□ -0.8
SMG7-201ENST00000347615 RHBDF1Q96CC6 855 aa10.04□□□□□ -0.8
SMG7-201ENST00000347615 STOX2Q9P2F5 926 aaPredicted RBP10.04□□□□□ -0.8
SMG7-201ENST00000347615 CARD8Q9Y2G2 431 aa10.04□□□□□ -0.8
SMG7-201ENST00000347615 MAU2Q9Y6X3 613 aa10.04□□□□□ -0.8
SMG7-201ENST00000347615 ARID1BQ8NFD5 2236 aaPredicted RBP10.04□□□□□ -0.8
SMG7-201ENST00000347615 NFATC1O95644 943 aa10.04□□□□□ -0.8
SMG7-201ENST00000347615 SMIM18P0DKX4 95 aa10.04□□□□□ -0.8
SMG7-201ENST00000347615 TIA1P31483 386 aaKnown RBP eCLIP10.04□□□□□ -0.8
SMG7-201ENST00000347615 CLCN2P51788 898 aa10.04□□□□□ -0.8
SMG7-201ENST00000347615 INHBCP55103 352 aa10.04□□□□□ -0.8
SMG7-201ENST00000347615 SFRP4Q6FHJ7 346 aaPredicted RBP10.04□□□□□ -0.8
SMG7-201ENST00000347615 SLC25A25Q6KCM7 469 aa10.04□□□□□ -0.8
SMG7-201ENST00000347615 ZC3H14Q6PJT7 736 aaKnown RBP10.04□□□□□ -0.8
SMG7-201ENST00000347615 TMEM25Q86YD3 366 aa10.04□□□□□ -0.8
SMG7-201ENST00000347615 CHDHQ8NE62 594 aaPredicted RBP10.04□□□□□ -0.8
SMG7-201ENST00000347615 WDR20Q8TBZ3 569 aa10.04□□□□□ -0.8
SMG7-201ENST00000347615 MCHR1Q99705 422 aa10.04□□□□□ -0.8
SMG7-201ENST00000347615 DPCDQ9BVM2 203 aaPredicted RBP10.04□□□□□ -0.8
SMG7-201ENST00000347615 C1QTNF1Q9BXJ1 281 aa10.04□□□□□ -0.8
SMG7-201ENST00000347615 RDH8Q9NYR8 311 aa10.04□□□□□ -0.8
SMG7-201ENST00000347615 CKLFQ9UBR5 152 aa10.04□□□□□ -0.8
SMG7-201ENST00000347615 ADAMTS5Q9UNA0 930 aa10.04□□□□□ -0.8
SMG7-201ENST00000347615 C5orf51A6NDU8 294 aa10.04□□□□□ -0.8
SMG7-201ENST00000347615 INMT-MINDY4F8WBC2 141 aa10.04□□□□□ -0.8
SMG7-201ENST00000347615 ZNF3P17036 446 aa10.04□□□□□ -0.8
SMG7-201ENST00000347615 HOXB6P17509 224 aaKnown RBP10.04□□□□□ -0.8
SMG7-201ENST00000347615 TACR1P25103 407 aa10.04□□□□□ -0.8
SMG7-201ENST00000347615 ACADLP28330 430 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms