RNA–Protein interactions for RNA: ENST00000345795.6

CASC4-202, Transcript of cancer susceptibility 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CASC4, Length 3,764 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-202ENST00000345795 Q8N9G6 341 aaPredicted RBP12.69□□□□□ -0.38
CASC4-202ENST00000345795 OR9A2Q8NGT5 310 aa12.69□□□□□ -0.38
CASC4-202ENST00000345795 POLR2J3Q9H1A7 115 aaKnown RBP12.69□□□□□ -0.38
CASC4-202ENST00000345795 ATP6V1HQ9UI12 483 aa12.69□□□□□ -0.38
CASC4-202ENST00000345795 CACNA1HO95180 2353 aa12.69□□□□□ -0.38
CASC4-202ENST00000345795 CLPXO76031 633 aa12.68□□□□□ -0.38
CASC4-202ENST00000345795 EGFP01133 1207 aa12.68□□□□□ -0.38
CASC4-202ENST00000345795 CCNYL3P0C7X3 344 aa12.68□□□□□ -0.38
CASC4-202ENST00000345795 NKX3-2P78367 333 aa12.68□□□□□ -0.38
CASC4-202ENST00000345795 CTBSQ01459 385 aa12.68□□□□□ -0.38
CASC4-202ENST00000345795 CDC73Q6P1J9 531 aa12.68□□□□□ -0.38
CASC4-202ENST00000345795 HACD2Q6Y1H2 254 aa12.68□□□□□ -0.38
CASC4-202ENST00000345795 ATP6V1C2Q8NEY4 427 aa12.68□□□□□ -0.38
CASC4-202ENST00000345795 RGMAQ96B86 450 aa12.68□□□□□ -0.38
CASC4-202ENST00000345795 GAL3ST4Q96RP7 486 aa12.68□□□□□ -0.38
CASC4-202ENST00000345795 CPPED1Q9BRF8 314 aaPredicted RBP12.68□□□□□ -0.38
CASC4-202ENST00000345795 ANKRD60Q9BZ19 345 aa12.68□□□□□ -0.38
CASC4-202ENST00000345795 FAM120CQ9NX05 1096 aaKnown RBP12.68□□□□□ -0.38
CASC4-202ENST00000345795 CNIH4Q9P003 139 aa12.68□□□□□ -0.38
CASC4-202ENST00000345795 ABCD2Q9UBJ2 740 aa12.68□□□□□ -0.38
CASC4-202ENST00000345795 ALPLP05186 524 aa12.68□□□□□ -0.38
CASC4-202ENST00000345795 S100A5P33763 92 aa12.68□□□□□ -0.38
CASC4-202ENST00000345795 GRHL2Q6ISB3 625 aa12.68□□□□□ -0.38
CASC4-202ENST00000345795 FATE1Q969F0 183 aa12.68□□□□□ -0.38
CASC4-202ENST00000345795 ECHDC3Q96DC8 303 aa12.68□□□□□ -0.38
CASC4-202ENST00000345795 OTUB2Q96DC9 234 aa12.68□□□□□ -0.38
CASC4-202ENST00000345795 ZBED6CLQ96FA7 236 aaPredicted RBP12.68□□□□□ -0.38
CASC4-202ENST00000345795 OR51I1Q9H343 314 aa12.68□□□□□ -0.38
CASC4-202ENST00000345795 CXorf36Q9H7Y0 433 aa12.68□□□□□ -0.38
CASC4-202ENST00000345795 KCMF1Q9P0J7 381 aa12.68□□□□□ -0.38
CASC4-202ENST00000345795 CELSR3Q9NYQ7 3312 aa12.68□□□□□ -0.38
CASC4-202ENST00000345795 MPC1LP0DKB6 136 aa12.68□□□□□ -0.38
CASC4-202ENST00000345795 CDC42P60953 191 aa12.68□□□□□ -0.38
CASC4-202ENST00000345795 ADRM1Q16186 407 aa12.68□□□□□ -0.38
CASC4-202ENST00000345795 HSDL2Q6YN16 418 aa12.68□□□□□ -0.38
CASC4-202ENST00000345795 CARM1Q86X55 608 aa12.68□□□□□ -0.38
CASC4-202ENST00000345795 HORMAD2Q8N7B1 307 aa12.68□□□□□ -0.38
CASC4-202ENST00000345795 THAP3Q8WTV1 239 aaPredicted RBP12.68□□□□□ -0.38
CASC4-202ENST00000345795 ZNF514Q96K75 400 aaPredicted RBP12.68□□□□□ -0.38
CASC4-202ENST00000345795 ZDHHC5Q9C0B5 715 aa12.68□□□□□ -0.38
CASC4-202ENST00000345795 NLGN3Q9NZ94 848 aa12.68□□□□□ -0.38
CASC4-202ENST00000345795 HCN3Q9P1Z3 774 aa12.68□□□□□ -0.38
CASC4-202ENST00000345795 MRPS7Q9Y2R9 242 aaKnown RBP12.68□□□□□ -0.38
CASC4-202ENST00000345795 SLC1A7O00341 560 aa12.67□□□□□ -0.38
CASC4-202ENST00000345795 CCNB2O95067 398 aa12.67□□□□□ -0.38
CASC4-202ENST00000345795 SLC35G6P0C7Q6 338 aa12.67□□□□□ -0.38
CASC4-202ENST00000345795 OCM2P0CE71 109 aa12.67□□□□□ -0.38
CASC4-202ENST00000345795 OCMP0CE72 109 aaPredicted RBP12.67□□□□□ -0.38
CASC4-202ENST00000345795 CLCA4Q14CN2 919 aa12.67□□□□□ -0.38
CASC4-202ENST00000345795 CRB2Q5IJ48 1285 aa12.67□□□□□ -0.38
CASC4-202ENST00000345795 MLIPQ5VWP3 458 aa12.67□□□□□ -0.38
CASC4-202ENST00000345795 Q6ZS52 159 aa12.67□□□□□ -0.38
CASC4-202ENST00000345795 PLEKHM3Q6ZWE6 761 aa12.67□□□□□ -0.38
CASC4-202ENST00000345795 TRIM46Q7Z4K8 759 aa12.67□□□□□ -0.38
CASC4-202ENST00000345795 OR51L1Q8NGJ5 315 aa12.67□□□□□ -0.38
CASC4-202ENST00000345795 AHCYL2Q96HN2 611 aaKnown RBP12.67□□□□□ -0.38
CASC4-202ENST00000345795 CAMK1GQ96NX5 476 aa12.67□□□□□ -0.38
CASC4-202ENST00000345795 NIPSNAP1Q9BPW8 284 aa12.67□□□□□ -0.38
CASC4-202ENST00000345795 FUNDC2Q9BWH2 189 aa12.67□□□□□ -0.38
CASC4-202ENST00000345795 RNF167Q9H6Y7 350 aa12.67□□□□□ -0.38
CASC4-202ENST00000345795 ZDHHC7Q9NXF8 308 aa12.67□□□□□ -0.38
CASC4-202ENST00000345795 MS4A12Q9NXJ0 267 aa12.67□□□□□ -0.38
CASC4-202ENST00000345795 NTNG1Q9Y2I2 539 aa12.67□□□□□ -0.38
CASC4-202ENST00000345795 LRRC37A2A6NM11 1700 aa12.67□□□□□ -0.38
CASC4-202ENST00000345795 SIP14410 1827 aa12.67□□□□□ -0.38
CASC4-202ENST00000345795 TRBV5-4A0A0C4DH59 114 aa12.67□□□□□ -0.38
CASC4-202ENST00000345795 PLPP1O14494 284 aa12.67□□□□□ -0.38
CASC4-202ENST00000345795 LILRB3O75022 631 aa12.67□□□□□ -0.38
CASC4-202ENST00000345795 SLCO2B1O94956 709 aa12.67□□□□□ -0.38
CASC4-202ENST00000345795 AP2A2O94973 939 aa12.67□□□□□ -0.38
CASC4-202ENST00000345795 NTSR1P30989 418 aa12.67□□□□□ -0.38
CASC4-202ENST00000345795 CDKN3Q16667 212 aa12.67□□□□□ -0.38
CASC4-202ENST00000345795 CRIPAKQ8N1N5 446 aa12.67□□□□□ -0.38
CASC4-202ENST00000345795 C1GALT1C1Q96EU7 318 aa12.67□□□□□ -0.38
CASC4-202ENST00000345795 PSME2Q9UL46 239 aa12.67□□□□□ -0.38
CASC4-202ENST00000345795 EPOPA6NHQ4 379 aa12.67□□□□□ -0.38
CASC4-202ENST00000345795 TBX1O43435 398 aa12.67□□□□□ -0.38
CASC4-202ENST00000345795 HMGN2P05204 90 aaKnown RBP12.67□□□□□ -0.38
CASC4-202ENST00000345795 GKN3PP0CG01 181 aa12.67□□□□□ -0.38
CASC4-202ENST00000345795 CMPK1P30085 196 aa12.67□□□□□ -0.38
CASC4-202ENST00000345795 DAPP51397 102 aa12.67□□□□□ -0.38
CASC4-202ENST00000345795 SFSWAPQ12872 951 aaKnown RBP12.67□□□□□ -0.38
CASC4-202ENST00000345795 SP140Q13342 867 aa12.67□□□□□ -0.38
CASC4-202ENST00000345795 COLEC12Q5KU26 742 aa12.67□□□□□ -0.38
CASC4-202ENST00000345795 P2RY8Q86VZ1 359 aa12.67□□□□□ -0.38
CASC4-202ENST00000345795 CCDC103Q8IW40 242 aa12.67□□□□□ -0.38
CASC4-202ENST00000345795 FBXL6Q8N531 539 aa12.67□□□□□ -0.38
CASC4-202ENST00000345795 CEP295NLQ96MC4 621 aa12.67□□□□□ -0.38
CASC4-202ENST00000345795 TBC1D17Q9HA65 648 aa12.67□□□□□ -0.38
CASC4-202ENST00000345795 NTN4Q9HB63 628 aa12.67□□□□□ -0.38
CASC4-202ENST00000345795 PTTG2Q9NZH5 202 aa12.67□□□□□ -0.38
CASC4-202ENST00000345795 LAMA1P25391 3075 aa12.66□□□□□ -0.38
CASC4-202ENST00000345795 GFYI3L273 518 aa12.66□□□□□ -0.38
CASC4-202ENST00000345795 CAPN5O15484 640 aaPredicted RBP12.66□□□□□ -0.38
CASC4-202ENST00000345795 SERPINB7O75635 380 aa12.66□□□□□ -0.38
CASC4-202ENST00000345795 WISP3O95389 354 aaPredicted RBP12.66□□□□□ -0.38
CASC4-202ENST00000345795 GPR4P46093 362 aa12.66□□□□□ -0.38
CASC4-202ENST00000345795 SLC9A3P48764 834 aa12.66□□□□□ -0.38
CASC4-202ENST00000345795 UGT2B15P54855 530 aa12.66□□□□□ -0.38
CASC4-202ENST00000345795 LSM11P83369 360 aaKnown RBP eCLIP12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms