RNA–Protein interactions for RNA: ENST00000345734.7

ATG4A-202, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best) BASIC

Gene ATG4A, Length 2,129 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-202ENST00000345734 MSRB2Q9Y3D2 182 aa8.78□□□□□ -1
ATG4A-202ENST00000345734 HS3ST3A1Q9Y663 406 aa8.78□□□□□ -1
ATG4A-202ENST00000345734 COLEC10Q9Y6Z7 277 aa8.78□□□□□ -1
ATG4A-202ENST00000345734 HTR3EA5X5Y0 456 aa8.78□□□□□ -1
ATG4A-202ENST00000345734 A6NCN8 305 aa8.78□□□□□ -1
ATG4A-202ENST00000345734 DLL1O00548 723 aa8.78□□□□□ -1
ATG4A-202ENST00000345734 RNASET2O00584 256 aaKnown RBP8.78□□□□□ -1
ATG4A-202ENST00000345734 TNFRSF10CO14798 259 aa8.78□□□□□ -1
ATG4A-202ENST00000345734 HAT1O14929 419 aa8.78□□□□□ -1
ATG4A-202ENST00000345734 NDUFS4O43181 175 aa8.78□□□□□ -1
ATG4A-202ENST00000345734 DENRO43583 198 aaKnown RBP8.78□□□□□ -1
ATG4A-202ENST00000345734 PRKD3O94806 890 aa8.78□□□□□ -1
ATG4A-202ENST00000345734 SEMA3DO95025 777 aa8.78□□□□□ -1
ATG4A-202ENST00000345734 KCNK5O95279 499 aa8.78□□□□□ -1
ATG4A-202ENST00000345734 SERPINA1P01009 418 aa8.78□□□□□ -1
ATG4A-202ENST00000345734 IGLV3-19P01714 112 aa8.78□□□□□ -1
ATG4A-202ENST00000345734 LYNP07948 512 aa8.78□□□□□ -1
ATG4A-202ENST00000345734 MSL3P1P0C860 447 aa8.78□□□□□ -1
ATG4A-202ENST00000345734 VSIG8P0DPA2 414 aa8.78□□□□□ -1
ATG4A-202ENST00000345734 FCGR1AP12314 374 aa8.78□□□□□ -1
ATG4A-202ENST00000345734 CASP9P55211 416 aa8.78□□□□□ -1
ATG4A-202ENST00000345734 YPEL5P62699 121 aa8.78□□□□□ -1
ATG4A-202ENST00000345734 HBA1P69905 142 aa8.78□□□□□ -1
ATG4A-202ENST00000345734 SPIDRQ14159 915 aa8.78□□□□□ -1
ATG4A-202ENST00000345734 LRRC32Q14392 662 aa8.78□□□□□ -1
ATG4A-202ENST00000345734 ADRM1Q16186 407 aa8.78□□□□□ -1
ATG4A-202ENST00000345734 BCL2A1Q16548 175 aa8.78□□□□□ -1
ATG4A-202ENST00000345734 MRM1Q6IN84 353 aaKnown RBP8.78□□□□□ -1
ATG4A-202ENST00000345734 PPP4R4Q6NUP7 873 aa8.78□□□□□ -1
ATG4A-202ENST00000345734 TMEM53Q6P2H8 277 aa8.78□□□□□ -1
ATG4A-202ENST00000345734 ISLR2Q6UXK2 745 aa8.78□□□□□ -1
ATG4A-202ENST00000345734 WASH2PQ6VEQ5 465 aa8.78□□□□□ -1
ATG4A-202ENST00000345734 SPATC1Q76KD6 591 aa8.78□□□□□ -1
ATG4A-202ENST00000345734 SYT13Q7L8C5 426 aa8.78□□□□□ -1
ATG4A-202ENST00000345734 R3HCC1LQ7Z5L2 792 aaKnown RBP8.78□□□□□ -1
ATG4A-202ENST00000345734 ABI3BPQ7Z7G0 1075 aa8.78□□□□□ -1
ATG4A-202ENST00000345734 GALNT10Q86SR1 603 aa8.78□□□□□ -1
ATG4A-202ENST00000345734 SERPINA11Q86U17 422 aa8.78□□□□□ -1
ATG4A-202ENST00000345734 AMIGO1Q86WK6 493 aa8.78□□□□□ -1
ATG4A-202ENST00000345734 PTOV1Q86YD1 416 aa8.78□□□□□ -1
ATG4A-202ENST00000345734 SFTPA2Q8IWL1 248 aa8.78□□□□□ -1
ATG4A-202ENST00000345734 ZZZ3Q8IYH5 903 aa8.78□□□□□ -1
ATG4A-202ENST00000345734 VPS37AQ8NEZ2 397 aa8.78□□□□□ -1
ATG4A-202ENST00000345734 CREB3L4Q8TEY5 395 aa8.78□□□□□ -1
ATG4A-202ENST00000345734 ZFP90Q8TF47 636 aa8.78□□□□□ -1
ATG4A-202ENST00000345734 TM4SF18Q96CE8 201 aa8.78□□□□□ -1
ATG4A-202ENST00000345734 ZNF597Q96LX8 424 aa8.78□□□□□ -1
ATG4A-202ENST00000345734 DPH7Q9BTV6 452 aa8.78□□□□□ -1
ATG4A-202ENST00000345734 OSBPL10Q9BXB5 764 aa8.78□□□□□ -1
ATG4A-202ENST00000345734 TPSD1Q9BZJ3 242 aa8.78□□□□□ -1
ATG4A-202ENST00000345734 ABCG4Q9H172 646 aa8.78□□□□□ -1
ATG4A-202ENST00000345734 KLHL31Q9H511 634 aa8.78□□□□□ -1
ATG4A-202ENST00000345734 DCAF13Q9NV06 445 aaKnown RBP8.78□□□□□ -1
ATG4A-202ENST00000345734 TAAR2Q9P1P5 351 aa8.78□□□□□ -1
ATG4A-202ENST00000345734 OAZ3Q9UMX2 235 aa8.78□□□□□ -1
ATG4A-202ENST00000345734 ZBTB32Q9Y2Y4 487 aaPredicted RBP8.78□□□□□ -1
ATG4A-202ENST00000345734 ABCA7Q8IZY2 2146 aa8.78□□□□□ -1
ATG4A-202ENST00000345734 SDK1Q7Z5N4 2213 aa8.77□□□□□ -1
ATG4A-202ENST00000345734 TRBC2A0A5B9 178 aa8.77□□□□□ -1.01
ATG4A-202ENST00000345734 MAGEA13PA6NCF6 341 aa8.77□□□□□ -1.01
ATG4A-202ENST00000345734 ISM1B1AKI9 464 aa8.77□□□□□ -1.01
ATG4A-202ENST00000345734 PRAMEF26H0Y7S4 382 aa8.77□□□□□ -1.01
ATG4A-202ENST00000345734 BTN3A3O00478 584 aa8.77□□□□□ -1.01
ATG4A-202ENST00000345734 ACOX3O15254 700 aa8.77□□□□□ -1.01
ATG4A-202ENST00000345734 ATE1O95260 518 aa8.77□□□□□ -1.01
ATG4A-202ENST00000345734 LDLRP01130 860 aa8.77□□□□□ -1.01
ATG4A-202ENST00000345734 NTRK1P04629 796 aa8.77□□□□□ -1.01
ATG4A-202ENST00000345734 CELA2BP08218 269 aaPredicted RBP8.77□□□□□ -1.01
ATG4A-202ENST00000345734 CHRM5P08912 532 aaPredicted RBP8.77□□□□□ -1.01
ATG4A-202ENST00000345734 RAP2AP10114 183 aa8.77□□□□□ -1.01
ATG4A-202ENST00000345734 IL9P15248 144 aa8.77□□□□□ -1.01
ATG4A-202ENST00000345734 GPX2P18283 190 aa8.77□□□□□ -1.01
ATG4A-202ENST00000345734 RABIFP47224 123 aa8.77□□□□□ -1.01
ATG4A-202ENST00000345734 MAPK12P53778 367 aa8.77□□□□□ -1.01
ATG4A-202ENST00000345734 PLA2G16P53816 162 aa8.77□□□□□ -1.01
ATG4A-202ENST00000345734 CHRNB3Q05901 458 aa8.77□□□□□ -1.01
ATG4A-202ENST00000345734 FZD5Q13467 585 aa8.77□□□□□ -1.01
ATG4A-202ENST00000345734 FAM98BQ52LJ0 330 aaKnown RBP8.77□□□□□ -1.01
ATG4A-202ENST00000345734 PRRT3Q5FWE3 981 aa8.77□□□□□ -1.01
ATG4A-202ENST00000345734 DDX59Q5T1V6 619 aaKnown RBP eCLIP8.77□□□□□ -1.01
ATG4A-202ENST00000345734 Q7L0L9 218 aa8.77□□□□□ -1.01
ATG4A-202ENST00000345734 TSTD1Q8NFU3 115 aa8.77□□□□□ -1.01
ATG4A-202ENST00000345734 PATE1Q8WXA2 126 aa8.77□□□□□ -1.01
ATG4A-202ENST00000345734 UCN3Q969E3 161 aa8.77□□□□□ -1.01
ATG4A-202ENST00000345734 SLC47A1Q96FL8 570 aa8.77□□□□□ -1.01
ATG4A-202ENST00000345734 VPS50Q96JG6 964 aa8.77□□□□□ -1.01
ATG4A-202ENST00000345734 CNBD2Q96M20 576 aa8.77□□□□□ -1.01
ATG4A-202ENST00000345734 PITHD1Q9GZP4 211 aaPredicted RBP8.77□□□□□ -1.01
ATG4A-202ENST00000345734 NTN4Q9HB63 628 aa8.77□□□□□ -1.01
ATG4A-202ENST00000345734 AASDHPPTQ9NRN7 309 aa8.77□□□□□ -1.01
ATG4A-202ENST00000345734 WSB2Q9NYS7 404 aaPredicted RBP8.77□□□□□ -1.01
ATG4A-202ENST00000345734 DLGAP2Q9P1A6 1054 aa8.77□□□□□ -1.01
ATG4A-202ENST00000345734 C5AR2Q9P296 337 aa8.77□□□□□ -1.01
ATG4A-202ENST00000345734 ACSL6Q9UKU0 697 aa8.77□□□□□ -1.01
ATG4A-202ENST00000345734 PCOLCE2Q9UKZ9 415 aa8.77□□□□□ -1.01
ATG4A-202ENST00000345734 VPS4AQ9UN37 437 aa8.77□□□□□ -1.01
ATG4A-202ENST00000345734 DUSP12Q9UNI6 340 aa8.77□□□□□ -1.01
ATG4A-202ENST00000345734 SCN2AQ99250 2005 aa8.77□□□□□ -1.01
ATG4A-202ENST00000345734 CCDC88CQ9P219 2028 aa8.77□□□□□ -1.01
ATG4A-202ENST00000345734 KRBA1A5PL33 1030 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms