RNA–Protein interactions for RNA: ENST00000345005.8

CLK3-201, Transcript of CDC like kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK3, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-201ENST00000345005 KHDRBS2Q5VWX1 349 aaKnown RBP12.21□□□□□ -0.45
CLK3-201ENST00000345005 PAGE2Q7Z2X7 111 aa12.21□□□□□ -0.45
CLK3-201ENST00000345005 ADCK2Q7Z695 626 aa12.21□□□□□ -0.45
CLK3-201ENST00000345005 SLC9B2Q86UD5 537 aa12.21□□□□□ -0.45
CLK3-201ENST00000345005 SLCO6A1Q86UG4 719 aa12.21□□□□□ -0.45
CLK3-201ENST00000345005 ZCCHC7Q8N3Z6 543 aaKnown RBP12.21□□□□□ -0.45
CLK3-201ENST00000345005 SPEM1Q8N4L4 309 aa12.21□□□□□ -0.45
CLK3-201ENST00000345005 FRMD1Q8N878 549 aa12.21□□□□□ -0.45
CLK3-201ENST00000345005 ANKRD53Q8N9V6 530 aa12.21□□□□□ -0.45
CLK3-201ENST00000345005 VPS37AQ8NEZ2 397 aa12.21□□□□□ -0.45
CLK3-201ENST00000345005 OR2L3Q8NG85 312 aa12.21□□□□□ -0.45
CLK3-201ENST00000345005 WDR48Q8TAF3 677 aa12.21□□□□□ -0.45
CLK3-201ENST00000345005 COQ8BQ96D53 544 aa12.21□□□□□ -0.45
CLK3-201ENST00000345005 QRFPRQ96P65 431 aa12.21□□□□□ -0.45
CLK3-201ENST00000345005 CSF3RQ99062 836 aa12.21□□□□□ -0.45
CLK3-201ENST00000345005 DUSP26Q9BV47 211 aa12.21□□□□□ -0.45
CLK3-201ENST00000345005 REXO4Q9GZR2 422 aaKnown RBP12.21□□□□□ -0.45
CLK3-201ENST00000345005 SRMSQ9H3Y6 488 aa12.21□□□□□ -0.45
CLK3-201ENST00000345005 MYNNQ9NPC7 610 aa12.21□□□□□ -0.45
CLK3-201ENST00000345005 SLC25A37Q9NYZ2 338 aa12.21□□□□□ -0.45
CLK3-201ENST00000345005 ATP6V1HQ9UI12 483 aa12.21□□□□□ -0.45
CLK3-201ENST00000345005 SNX7Q9UNH6 387 aa12.21□□□□□ -0.45
CLK3-201ENST00000345005 DOLKQ9UPQ8 538 aa12.21□□□□□ -0.45
CLK3-201ENST00000345005 NEUROG3Q9Y4Z2 214 aa12.21□□□□□ -0.45
CLK3-201ENST00000345005 FEZF1A0PJY2 475 aa12.21□□□□□ -0.46
CLK3-201ENST00000345005 OR5K4A6NMS3 321 aa12.21□□□□□ -0.46
CLK3-201ENST00000345005 SLC1A7O00341 560 aa12.21□□□□□ -0.46
CLK3-201ENST00000345005 SAP18O00422 153 aaKnown RBP12.21□□□□□ -0.46
CLK3-201ENST00000345005 TPD52L2O43399 206 aaKnown RBP12.21□□□□□ -0.46
CLK3-201ENST00000345005 CLEC3AO75596 197 aa12.21□□□□□ -0.46
CLK3-201ENST00000345005 PRKD3O94806 890 aa12.21□□□□□ -0.46
CLK3-201ENST00000345005 KLK1P06870 262 aa12.21□□□□□ -0.46
CLK3-201ENST00000345005 CHRM5P08912 532 aaPredicted RBP12.21□□□□□ -0.46
CLK3-201ENST00000345005 JUNDP17535 347 aa12.21□□□□□ -0.46
CLK3-201ENST00000345005 CD40LGP29965 261 aa12.21□□□□□ -0.46
CLK3-201ENST00000345005 ST13P50502 369 aaKnown RBP12.21□□□□□ -0.46
CLK3-201ENST00000345005 TUBA1BP68363 451 aa12.21□□□□□ -0.46
CLK3-201ENST00000345005 EIF2B5Q13144 721 aaKnown RBP12.21□□□□□ -0.46
CLK3-201ENST00000345005 KEAP1Q14145 624 aa12.21□□□□□ -0.46
CLK3-201ENST00000345005 SELPLGQ14242 412 aa12.21□□□□□ -0.46
CLK3-201ENST00000345005 FZD2Q14332 565 aa12.21□□□□□ -0.46
CLK3-201ENST00000345005 TCEA2Q15560 299 aa12.21□□□□□ -0.46
CLK3-201ENST00000345005 SLC16A12Q6ZSM3 486 aa12.21□□□□□ -0.46
CLK3-201ENST00000345005 TUBA1AQ71U36 451 aa12.21□□□□□ -0.46
CLK3-201ENST00000345005 ADCK1Q86TW2 530 aa12.21□□□□□ -0.46
CLK3-201ENST00000345005 TRIM48Q8IWZ4 208 aa12.21□□□□□ -0.46
CLK3-201ENST00000345005 MSRB3Q8IXL7 192 aa12.21□□□□□ -0.46
CLK3-201ENST00000345005 CAMKK1Q8N5S9 505 aa12.21□□□□□ -0.46
CLK3-201ENST00000345005 FAM160A2Q8N612 972 aaPredicted RBP12.21□□□□□ -0.46
CLK3-201ENST00000345005 ARL10Q8N8L6 244 aa12.21□□□□□ -0.46
CLK3-201ENST00000345005 CADM4Q8NFZ8 388 aa12.21□□□□□ -0.46
CLK3-201ENST00000345005 OR4E2Q8NGC2 313 aa12.21□□□□□ -0.46
CLK3-201ENST00000345005 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.21□□□□□ -0.46
CLK3-201ENST00000345005 C16orf78Q8WTQ4 265 aa12.21□□□□□ -0.46
CLK3-201ENST00000345005 FAM162AQ96A26 154 aa12.21□□□□□ -0.46
CLK3-201ENST00000345005 SLC22A18Q96BI1 424 aa12.21□□□□□ -0.46
CLK3-201ENST00000345005 MTERF3Q96E29 417 aa12.21□□□□□ -0.46
CLK3-201ENST00000345005 ZNF583Q96ND8 569 aa12.21□□□□□ -0.46
CLK3-201ENST00000345005 MBOAT4Q96T53 435 aa12.21□□□□□ -0.46
CLK3-201ENST00000345005 APOL4Q9BPW4 351 aa12.21□□□□□ -0.46
CLK3-201ENST00000345005 ORAI3Q9BRQ5 295 aa12.21□□□□□ -0.46
CLK3-201ENST00000345005 INPP5KQ9BT40 448 aa12.21□□□□□ -0.46
CLK3-201ENST00000345005 ASPSCR1Q9BZE9 553 aa12.21□□□□□ -0.46
CLK3-201ENST00000345005 CHRDQ9H2X0 955 aa12.21□□□□□ -0.46
CLK3-201ENST00000345005 REEP4Q9H6H4 257 aa12.21□□□□□ -0.46
CLK3-201ENST00000345005 SP140LQ9H930 580 aa12.21□□□□□ -0.46
CLK3-201ENST00000345005 TBC1D17Q9HA65 648 aa12.21□□□□□ -0.46
CLK3-201ENST00000345005 CPNE5Q9HCH3 593 aa12.21□□□□□ -0.46
CLK3-201ENST00000345005 AASDHPPTQ9NRN7 309 aa12.21□□□□□ -0.46
CLK3-201ENST00000345005 BTNL2Q9UIR0 455 aa12.21□□□□□ -0.46
CLK3-201ENST00000345005 GON4LQ3T8J9 2241 aa12.2□□□□□ -0.46
CLK3-201ENST00000345005 TRIOO75962 3097 aa12.2□□□□□ -0.46
CLK3-201ENST00000345005 TRBV23OR9-2A0A075B6M9 112 aa12.2□□□□□ -0.46
CLK3-201ENST00000345005 IGKV1-8A0A0C4DH67 115 aa12.2□□□□□ -0.46
CLK3-201ENST00000345005 METTL12A8MUP2 240 aa12.2□□□□□ -0.46
CLK3-201ENST00000345005 ISM1B1AKI9 464 aa12.2□□□□□ -0.46
CLK3-201ENST00000345005 TMX2-CTNND1H3BSU7 103 aa12.2□□□□□ -0.46
CLK3-201ENST00000345005 STK25O00506 426 aa12.2□□□□□ -0.46
CLK3-201ENST00000345005 DLL1O00548 723 aa12.2□□□□□ -0.46
CLK3-201ENST00000345005 SCN2BO60939 215 aa12.2□□□□□ -0.46
CLK3-201ENST00000345005 LAMP1P11279 417 aa12.2□□□□□ -0.46
CLK3-201ENST00000345005 CTSEP14091 401 aa12.2□□□□□ -0.46
CLK3-201ENST00000345005 PCMT1P22061 227 aa12.2□□□□□ -0.46
CLK3-201ENST00000345005 CD27P26842 260 aa12.2□□□□□ -0.46
CLK3-201ENST00000345005 PTPN6P29350 595 aa12.2□□□□□ -0.46
CLK3-201ENST00000345005 WNT3P56703 355 aa12.2□□□□□ -0.46
CLK3-201ENST00000345005 CD47Q08722 323 aa12.2□□□□□ -0.46
CLK3-201ENST00000345005 C2orf80Q0P641 193 aa12.2□□□□□ -0.46
CLK3-201ENST00000345005 CDC20Q12834 499 aa12.2□□□□□ -0.46
CLK3-201ENST00000345005 KCNAB2Q13303 367 aa12.2□□□□□ -0.46
CLK3-201ENST00000345005 SPCS2Q15005 226 aa12.2□□□□□ -0.46
CLK3-201ENST00000345005 CTF1Q16619 201 aa12.2□□□□□ -0.46
CLK3-201ENST00000345005 SYT6Q5T7P8 510 aaPredicted RBP12.2□□□□□ -0.46
CLK3-201ENST00000345005 IKBIPQ70UQ0 350 aa12.2□□□□□ -0.46
CLK3-201ENST00000345005 ANKRD46Q86W74 232 aa12.2□□□□□ -0.46
CLK3-201ENST00000345005 UBALD2Q8IYN6 164 aa12.2□□□□□ -0.46
CLK3-201ENST00000345005 LSM14AQ8ND56 463 aaKnown RBP12.2□□□□□ -0.46
CLK3-201ENST00000345005 IPCEF1Q8WWN9 437 aaPredicted RBP12.2□□□□□ -0.46
CLK3-201ENST00000345005 CLDN23Q96B33 292 aa12.2□□□□□ -0.46
CLK3-201ENST00000345005 RGMAQ96B86 450 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms