RNA–Protein interactions for RNA: ENST00000344548.7

CDC42-202, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDC42, Length 2,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-202ENST00000344548 CLOCKO15516 846 aa12.84□□□□□ -0.35
CDC42-202ENST00000344548 SLC35G6P0C7Q6 338 aa12.84□□□□□ -0.35
CDC42-202ENST00000344548 UBTFL6P0CB48 400 aaPredicted RBP12.84□□□□□ -0.35
CDC42-202ENST00000344548 CHI3L1P36222 383 aaPredicted RBP12.84□□□□□ -0.35
CDC42-202ENST00000344548 GFERP55789 205 aa12.84□□□□□ -0.35
CDC42-202ENST00000344548 EEF1A2Q05639 463 aaKnown RBP12.84□□□□□ -0.35
CDC42-202ENST00000344548 CHRNB3Q05901 458 aa12.84□□□□□ -0.35
CDC42-202ENST00000344548 SPIDRQ14159 915 aa12.84□□□□□ -0.35
CDC42-202ENST00000344548 FAM98BQ52LJ0 330 aaKnown RBP12.84□□□□□ -0.35
CDC42-202ENST00000344548 PPP4R4Q6NUP7 873 aa12.84□□□□□ -0.35
CDC42-202ENST00000344548 SLC36A4Q6YBV0 504 aa12.84□□□□□ -0.35
CDC42-202ENST00000344548 FAM92BQ6ZTR7 304 aa12.84□□□□□ -0.35
CDC42-202ENST00000344548 TMEM179BQ7Z7N9 219 aa12.84□□□□□ -0.35
CDC42-202ENST00000344548 GKN2Q86XP6 184 aa12.84□□□□□ -0.35
CDC42-202ENST00000344548 CCDC116Q8IYX3 515 aa12.84□□□□□ -0.35
CDC42-202ENST00000344548 HORMAD2Q8N7B1 307 aa12.84□□□□□ -0.35
CDC42-202ENST00000344548 OR5T3Q8NGG3 340 aa12.84□□□□□ -0.35
CDC42-202ENST00000344548 OTUB1Q96FW1 271 aaPredicted RBP12.84□□□□□ -0.35
CDC42-202ENST00000344548 PYURFQ96I23 114 aa12.84□□□□□ -0.35
CDC42-202ENST00000344548 VPS50Q96JG6 964 aa12.84□□□□□ -0.35
CDC42-202ENST00000344548 ZNF597Q96LX8 424 aa12.84□□□□□ -0.35
CDC42-202ENST00000344548 VNN3Q9NY84 501 aa12.84□□□□□ -0.35
CDC42-202ENST00000344548 WBP11Q9Y2W2 641 aaKnown RBP12.84□□□□□ -0.35
CDC42-202ENST00000344548 AP4B1Q9Y6B7 739 aa12.84□□□□□ -0.35
CDC42-202ENST00000344548 BDP1A6H8Y1 2624 aa12.83□□□□□ -0.35
CDC42-202ENST00000344548 LMO7DNF2Z398 122 aa12.83□□□□□ -0.35
CDC42-202ENST00000344548 PLOD2O00469 737 aa12.83□□□□□ -0.35
CDC42-202ENST00000344548 DIRAS1O95057 198 aa12.83□□□□□ -0.35
CDC42-202ENST00000344548 MED26O95402 600 aa12.83□□□□□ -0.35
CDC42-202ENST00000344548 LDLRP01130 860 aa12.83□□□□□ -0.35
CDC42-202ENST00000344548 DRD2P14416 443 aa12.83□□□□□ -0.35
CDC42-202ENST00000344548 UQCRC2P22695 453 aa12.83□□□□□ -0.35
CDC42-202ENST00000344548 VSX2P58304 361 aaPredicted RBP12.83□□□□□ -0.35
CDC42-202ENST00000344548 LRRC74AQ0VAA2 488 aa12.83□□□□□ -0.35
CDC42-202ENST00000344548 SHBQ15464 509 aa12.83□□□□□ -0.35
CDC42-202ENST00000344548 TMTC4Q5T4D3 741 aa12.83□□□□□ -0.35
CDC42-202ENST00000344548 TNFAIP8L2Q6P589 184 aaPredicted RBP12.83□□□□□ -0.35
CDC42-202ENST00000344548 RNF44Q7L0R7 432 aa12.83□□□□□ -0.35
CDC42-202ENST00000344548 OR4N5Q8IXE1 308 aa12.83□□□□□ -0.35
CDC42-202ENST00000344548 MAML2Q8IZL2 1156 aaPredicted RBP12.83□□□□□ -0.35
CDC42-202ENST00000344548 NFKBIDQ8NI38 313 aa12.83□□□□□ -0.35
CDC42-202ENST00000344548 GATA6Q92908 595 aa12.83□□□□□ -0.35
CDC42-202ENST00000344548 RAB8BQ92930 207 aa12.83□□□□□ -0.35
CDC42-202ENST00000344548 C10orf90Q96M02 699 aa12.83□□□□□ -0.35
CDC42-202ENST00000344548 UGT2B28Q9BY64 529 aa12.83□□□□□ -0.35
CDC42-202ENST00000344548 PI4KAP42356 2102 aa12.83□□□□□ -0.36
CDC42-202ENST00000344548 MYOCOSA0A1B0GUC4 107 aa12.83□□□□□ -0.36
CDC42-202ENST00000344548 EI24O14681 340 aa12.83□□□□□ -0.36
CDC42-202ENST00000344548 PRSS23O95084 383 aa12.83□□□□□ -0.36
CDC42-202ENST00000344548 TDGF1P13385 188 aa12.83□□□□□ -0.36
CDC42-202ENST00000344548 TNFRSF1BP20333 461 aa12.83□□□□□ -0.36
CDC42-202ENST00000344548 AFF3P51826 1226 aaKnown RBP12.83□□□□□ -0.36
CDC42-202ENST00000344548 HNRNPKP61978 463 aaKnown RBP eCLIP12.83□□□□□ -0.36
CDC42-202ENST00000344548 VLDLRP98155 873 aa12.83□□□□□ -0.36
CDC42-202ENST00000344548 RGS1Q08116 209 aa12.83□□□□□ -0.36
CDC42-202ENST00000344548 MAPK11Q15759 364 aa12.83□□□□□ -0.36
CDC42-202ENST00000344548 GPR19Q15760 415 aa12.83□□□□□ -0.36
CDC42-202ENST00000344548 CYP27C1Q4G0S4 372 aa12.83□□□□□ -0.36
CDC42-202ENST00000344548 SAXO2Q658L1 398 aa12.83□□□□□ -0.36
CDC42-202ENST00000344548 IRGCQ6NXR0 463 aa12.83□□□□□ -0.36
CDC42-202ENST00000344548 SLC48A1Q6P1K1 146 aa12.83□□□□□ -0.36
CDC42-202ENST00000344548 OLIG3Q7RTU3 272 aa12.83□□□□□ -0.36
CDC42-202ENST00000344548 SPRED1Q7Z699 444 aa12.83□□□□□ -0.36
CDC42-202ENST00000344548 SIMC1Q8NDZ2 872 aa12.83□□□□□ -0.36
CDC42-202ENST00000344548 DOK4Q8TEW6 326 aa12.83□□□□□ -0.36
CDC42-202ENST00000344548 TMBIM1Q969X1 311 aa12.83□□□□□ -0.36
CDC42-202ENST00000344548 MAGED4Q96JG8 741 aa12.83□□□□□ -0.36
CDC42-202ENST00000344548 ZNF681Q96N22 645 aa12.83□□□□□ -0.36
CDC42-202ENST00000344548 BTBD9Q96Q07 612 aa12.83□□□□□ -0.36
CDC42-202ENST00000344548 OLAHQ9NV23 265 aa12.83□□□□□ -0.36
CDC42-202ENST00000344548 CNOT11Q9UKZ1 510 aaKnown RBP12.83□□□□□ -0.36
CDC42-202ENST00000344548 ABCG2Q9UNQ0 655 aa12.83□□□□□ -0.36
CDC42-202ENST00000344548 NCOR1O75376 2440 aa12.83□□□□□ -0.36
CDC42-202ENST00000344548 PRAMEF27A3QJZ7 478 aa12.82□□□□□ -0.36
CDC42-202ENST00000344548 NCBP2P52298 156 aaKnown RBP eCLIP12.82□□□□□ -0.36
CDC42-202ENST00000344548 VEZF1Q14119 521 aa12.82□□□□□ -0.36
CDC42-202ENST00000344548 LTB4RQ15722 352 aa12.82□□□□□ -0.36
CDC42-202ENST00000344548 OGFOD3Q6PK18 319 aa12.82□□□□□ -0.36
CDC42-202ENST00000344548 C6orf120Q7Z4R8 191 aa12.82□□□□□ -0.36
CDC42-202ENST00000344548 TSEN54Q7Z6J9 526 aaKnown RBP12.82□□□□□ -0.36
CDC42-202ENST00000344548 ZC3H7AQ8IWR0 971 aaKnown RBP12.82□□□□□ -0.36
CDC42-202ENST00000344548 TRIML2Q8N7C3 387 aa12.82□□□□□ -0.36
CDC42-202ENST00000344548 TMEM52Q8NDY8 209 aa12.82□□□□□ -0.36
CDC42-202ENST00000344548 CATSPER1Q8NEC5 780 aa12.82□□□□□ -0.36
CDC42-202ENST00000344548 SRFBP1Q8NEF9 429 aaKnown RBP12.82□□□□□ -0.36
CDC42-202ENST00000344548 ZNF764Q96H86 408 aaPredicted RBP12.82□□□□□ -0.36
CDC42-202ENST00000344548 SEMA6CQ9H3T2 930 aa12.82□□□□□ -0.36
CDC42-202ENST00000344548 SOX17Q9H6I2 414 aaPredicted RBP12.82□□□□□ -0.36
CDC42-202ENST00000344548 EHD3Q9NZN3 535 aa12.82□□□□□ -0.36
CDC42-202ENST00000344548 PRAMEF25A6NGN4 478 aa12.82□□□□□ -0.36
CDC42-202ENST00000344548 hCG_2039718K7EN88 272 aa12.82□□□□□ -0.36
CDC42-202ENST00000344548 CST1P01037 141 aa12.82□□□□□ -0.36
CDC42-202ENST00000344548 SEMG1P04279 462 aa12.82□□□□□ -0.36
CDC42-202ENST00000344548 CDH3P22223 829 aa12.82□□□□□ -0.36
CDC42-202ENST00000344548 PPIBP23284 216 aaKnown RBP12.82□□□□□ -0.36
CDC42-202ENST00000344548 PCGF2P35227 344 aa12.82□□□□□ -0.36
CDC42-202ENST00000344548 SOX18P35713 384 aa12.82□□□□□ -0.36
CDC42-202ENST00000344548 LIM2P55344 173 aa12.82□□□□□ -0.36
CDC42-202ENST00000344548 SIM1P81133 766 aaPredicted RBP12.82□□□□□ -0.36
CDC42-202ENST00000344548 VAC14Q08AM6 782 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 224.9 ms