RNA–Protein interactions for RNA: ENST00000343575.10

CXCL12-201, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CXCL12, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-201ENST00000343575 ZNF385BQ569K4 471 aa13.93□□□□□ -0.18
CXCL12-201ENST00000343575 COQ5Q5HYK3 327 aa13.93□□□□□ -0.18
CXCL12-201ENST00000343575 CCNYL2Q5T2Q4 361 aa13.93□□□□□ -0.18
CXCL12-201ENST00000343575 PPP4R4Q6NUP7 873 aa13.93□□□□□ -0.18
CXCL12-201ENST00000343575 HACD2Q6Y1H2 254 aa13.93□□□□□ -0.18
CXCL12-201ENST00000343575 NUDT13Q86X67 352 aa13.93□□□□□ -0.18
CXCL12-201ENST00000343575 PLXDC1Q8IUK5 500 aa13.93□□□□□ -0.18
CXCL12-201ENST00000343575 ACOT4Q8N9L9 421 aa13.93□□□□□ -0.18
CXCL12-201ENST00000343575 OR8K5Q8NH50 307 aa13.93□□□□□ -0.18
CXCL12-201ENST00000343575 CDC26Q8NHZ8 85 aa13.93□□□□□ -0.18
CXCL12-201ENST00000343575 UCN3Q969E3 161 aa13.93□□□□□ -0.18
CXCL12-201ENST00000343575 ITPKCQ96DU7 683 aa13.93□□□□□ -0.18
CXCL12-201ENST00000343575 ZNF285Q96NJ3 590 aa13.93□□□□□ -0.18
CXCL12-201ENST00000343575 KCNC2Q96PR1 638 aa13.93□□□□□ -0.18
CXCL12-201ENST00000343575 SLC39A3Q9BRY0 314 aa13.93□□□□□ -0.18
CXCL12-201ENST00000343575 COQ10BQ9H8M1 238 aa13.93□□□□□ -0.18
CXCL12-201ENST00000343575 SERHLQ9NQF3 203 aa13.93□□□□□ -0.18
CXCL12-201ENST00000343575 OLAHQ9NV23 265 aa13.93□□□□□ -0.18
CXCL12-201ENST00000343575 PCDHGB4Q9UN71 923 aa13.93□□□□□ -0.18
CXCL12-201ENST00000343575 PCDHGB5Q9Y5G0 923 aa13.93□□□□□ -0.18
CXCL12-201ENST00000343575 PCDHGB2Q9Y5G2 931 aa13.93□□□□□ -0.18
CXCL12-201ENST00000343575 PCDHGA7Q9Y5G6 932 aa13.93□□□□□ -0.18
CXCL12-201ENST00000343575 NUP214P35658 2090 aaPredicted RBP13.92□□□□□ -0.18
CXCL12-201ENST00000343575 CUL9Q8IWT3 2517 aa13.92□□□□□ -0.18
CXCL12-201ENST00000343575 TCRBV3S1A0A5B6 114 aa13.92□□□□□ -0.18
CXCL12-201ENST00000343575 H3BMH7 237 aa13.92□□□□□ -0.18
CXCL12-201ENST00000343575 SCELO95171 688 aa13.92□□□□□ -0.18
CXCL12-201ENST00000343575 EIF2S1P05198 315 aaKnown RBP13.92□□□□□ -0.18
CXCL12-201ENST00000343575 IL6P05231 212 aa13.92□□□□□ -0.18
CXCL12-201ENST00000343575 IL3P08700 152 aa13.92□□□□□ -0.18
CXCL12-201ENST00000343575 SLC35G6P0C7Q6 338 aa13.92□□□□□ -0.18
CXCL12-201ENST00000343575 LAMP1P11279 417 aa13.92□□□□□ -0.18
CXCL12-201ENST00000343575 PCSK2P16519 638 aa13.92□□□□□ -0.18
CXCL12-201ENST00000343575 HIST1H1TP22492 207 aaPredicted RBP13.92□□□□□ -0.18
CXCL12-201ENST00000343575 SSR2P43308 183 aa13.92□□□□□ -0.18
CXCL12-201ENST00000343575 ASMTP46597 345 aa13.92□□□□□ -0.18
CXCL12-201ENST00000343575 PSME3P61289 254 aa13.92□□□□□ -0.18
CXCL12-201ENST00000343575 STXBP1P61764 594 aaKnown RBP13.92□□□□□ -0.18
CXCL12-201ENST00000343575 RGS1Q08116 209 aa13.92□□□□□ -0.18
CXCL12-201ENST00000343575 PDE7AQ13946 482 aa13.92□□□□□ -0.18
CXCL12-201ENST00000343575 GK3PQ14409 553 aa13.92□□□□□ -0.18
CXCL12-201ENST00000343575 KCNAB1Q14722 419 aa13.92□□□□□ -0.18
CXCL12-201ENST00000343575 MPEG1Q2M385 716 aa13.92□□□□□ -0.18
CXCL12-201ENST00000343575 PRTGQ2VWP7 1150 aa13.92□□□□□ -0.18
CXCL12-201ENST00000343575 ZNF829Q3KNS6 432 aaPredicted RBP13.92□□□□□ -0.18
CXCL12-201ENST00000343575 OR4F3Q6IEY1 312 aa13.92□□□□□ -0.18
CXCL12-201ENST00000343575 TMEM214Q6NUQ4 689 aaKnown RBP13.92□□□□□ -0.18
CXCL12-201ENST00000343575 DLEU7Q6UYE1 221 aa13.92□□□□□ -0.18
CXCL12-201ENST00000343575 PRSS41Q7RTY9 318 aa13.92□□□□□ -0.18
CXCL12-201ENST00000343575 PAGE2Q7Z2X7 111 aa13.92□□□□□ -0.18
CXCL12-201ENST00000343575 CAMKMTQ7Z624 323 aa13.92□□□□□ -0.18
CXCL12-201ENST00000343575 FAM9CQ8IZT9 166 aa13.92□□□□□ -0.18
CXCL12-201ENST00000343575 CAMKVQ8NCB2 501 aa13.92□□□□□ -0.18
CXCL12-201ENST00000343575 GTF2H4Q92759 462 aa13.92□□□□□ -0.18
CXCL12-201ENST00000343575 GAL3ST3Q96A11 431 aa13.92□□□□□ -0.18
CXCL12-201ENST00000343575 CNDP2Q96KP4 475 aaKnown RBP13.92□□□□□ -0.18
CXCL12-201ENST00000343575 TBCDQ9BTW9 1192 aa13.92□□□□□ -0.18
CXCL12-201ENST00000343575 TEX10Q9NXF1 929 aaPredicted RBP13.92□□□□□ -0.18
CXCL12-201ENST00000343575 ASB4Q9Y574 426 aa13.92□□□□□ -0.18
CXCL12-201ENST00000343575 ANGPT2O15123 496 aa13.91□□□□□ -0.18
CXCL12-201ENST00000343575 ZBTB11O95625 1053 aaPredicted RBP13.91□□□□□ -0.18
CXCL12-201ENST00000343575 FURINP09958 794 aa13.91□□□□□ -0.18
CXCL12-201ENST00000343575 BMP2P12643 396 aa13.91□□□□□ -0.18
CXCL12-201ENST00000343575 CD59P13987 128 aa13.91□□□□□ -0.18
CXCL12-201ENST00000343575 CERS1P27544 350 aa13.91□□□□□ -0.18
CXCL12-201ENST00000343575 PPM1FP49593 454 aaPredicted RBP13.91□□□□□ -0.18
CXCL12-201ENST00000343575 MAPK12P53778 367 aa13.91□□□□□ -0.18
CXCL12-201ENST00000343575 ATXN3P54252 364 aaPredicted RBP13.91□□□□□ -0.18
CXCL12-201ENST00000343575 PRSS42Q7Z5A4 293 aa13.91□□□□□ -0.18
CXCL12-201ENST00000343575 GPR180Q86V85 440 aa13.91□□□□□ -0.18
CXCL12-201ENST00000343575 CARFQ8N187 725 aa13.91□□□□□ -0.18
CXCL12-201ENST00000343575 ZCCHC7Q8N3Z6 543 aaKnown RBP13.91□□□□□ -0.18
CXCL12-201ENST00000343575 DTWD1Q8N5C7 304 aa13.91□□□□□ -0.18
CXCL12-201ENST00000343575 DPP10Q8N608 796 aa13.91□□□□□ -0.18
CXCL12-201ENST00000343575 CSNK1A1LQ8N752 337 aa13.91□□□□□ -0.18
CXCL12-201ENST00000343575 OR8J2Q8NGG1 315 aa13.91□□□□□ -0.18
CXCL12-201ENST00000343575 NAT6Q93015 286 aa13.91□□□□□ -0.18
CXCL12-201ENST00000343575 RERGQ96A58 199 aaPredicted RBP13.91□□□□□ -0.18
CXCL12-201ENST00000343575 COQ8BQ96D53 544 aa13.91□□□□□ -0.18
CXCL12-201ENST00000343575 SLC41A2Q96JW4 573 aa13.91□□□□□ -0.18
CXCL12-201ENST00000343575 COX4I2Q96KJ9 171 aa13.91□□□□□ -0.18
CXCL12-201ENST00000343575 GPATCH1Q9BRR8 931 aaKnown RBP13.91□□□□□ -0.18
CXCL12-201ENST00000343575 YTHDF1Q9BYJ9 559 aaKnown RBP13.91□□□□□ -0.18
CXCL12-201ENST00000343575 TRIM15Q9C019 465 aa13.91□□□□□ -0.18
CXCL12-201ENST00000343575 SLC6A13Q9NSD5 602 aa13.91□□□□□ -0.18
CXCL12-201ENST00000343575 ATP6V1HQ9UI12 483 aa13.91□□□□□ -0.18
CXCL12-201ENST00000343575 HCN4Q9Y3Q4 1203 aa13.91□□□□□ -0.18
CXCL12-201ENST00000343575 C7orf72A4D263 438 aa13.91□□□□□ -0.18
CXCL12-201ENST00000343575 TRIM64A6NGJ6 449 aa13.91□□□□□ -0.18
CXCL12-201ENST00000343575 WASHC1A8K0Z3 465 aa13.91□□□□□ -0.18
CXCL12-201ENST00000343575 RPLP0P05388 317 aaKnown RBP13.91□□□□□ -0.18
CXCL12-201ENST00000343575 TGM1P22735 817 aa13.91□□□□□ -0.18
CXCL12-201ENST00000343575 PTPN6P29350 595 aa13.91□□□□□ -0.18
CXCL12-201ENST00000343575 SEPHS1P49903 392 aa13.91□□□□□ -0.18
CXCL12-201ENST00000343575 BTN3A2P78410 334 aa13.91□□□□□ -0.18
CXCL12-201ENST00000343575 C2orf80Q0P641 193 aa13.91□□□□□ -0.18
CXCL12-201ENST00000343575 PGS1Q32NB8 556 aa13.91□□□□□ -0.18
CXCL12-201ENST00000343575 ZC3H12BQ5HYM0 836 aaKnown RBP13.91□□□□□ -0.18
CXCL12-201ENST00000343575 SAMD4BQ5PRF9 694 aaKnown RBP13.91□□□□□ -0.18
CXCL12-201ENST00000343575 SNAP47Q5SQN1 464 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms