RNA–Protein interactions for RNA: ENST00000340882.2

NECTIN1-202, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene NECTIN1, Length 1,059 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-202ENST00000340882 OR8K3Q8NH51 312 aa15.02■□□□□ -0
NECTIN1-202ENST00000340882 PAQR8Q8TEZ7 354 aa15.02■□□□□ -0
NECTIN1-202ENST00000340882 ZNF721Q8TF20 911 aa15.02■□□□□ -0
NECTIN1-202ENST00000340882 SMPDL3BQ92485 455 aa15.02■□□□□ -0
NECTIN1-202ENST00000340882 MS4A6EQ96DS6 147 aa15.02■□□□□ -0
NECTIN1-202ENST00000340882 LINGO1Q96FE5 620 aa15.02■□□□□ -0
NECTIN1-202ENST00000340882 PERPQ96FX8 193 aa15.02■□□□□ -0
NECTIN1-202ENST00000340882 DACH2Q96NX9 599 aa15.02■□□□□ -0
NECTIN1-202ENST00000340882 ALOXE3Q9BYJ1 711 aa15.02■□□□□ -0
NECTIN1-202ENST00000340882 HOMER3Q9NSC5 361 aa15.02■□□□□ -0
NECTIN1-202ENST00000340882 VTI1BQ9UEU0 232 aa15.02■□□□□ -0
NECTIN1-202ENST00000340882 IKZF3Q9UKT9 509 aa15.02■□□□□ -0
NECTIN1-202ENST00000340882 SH3D21A4FU49 640 aa15.01□□□□□ -0.01
NECTIN1-202ENST00000340882 C17orf105B2RV13 164 aa15.01□□□□□ -0.01
NECTIN1-202ENST00000340882 GUCA1CO95843 209 aa15.01□□□□□ -0.01
NECTIN1-202ENST00000340882 TBX6O95947 436 aaPredicted RBP15.01□□□□□ -0.01
NECTIN1-202ENST00000340882 C8BP07358 591 aa15.01□□□□□ -0.01
NECTIN1-202ENST00000340882 CTSSP25774 331 aa15.01□□□□□ -0.01
NECTIN1-202ENST00000340882 SOX18P35713 384 aa15.01□□□□□ -0.01
NECTIN1-202ENST00000340882 KCNJ1P48048 391 aa15.01□□□□□ -0.01
NECTIN1-202ENST00000340882 CDKN2DP55273 166 aa15.01□□□□□ -0.01
NECTIN1-202ENST00000340882 FOXF2Q12947 444 aa15.01□□□□□ -0.01
NECTIN1-202ENST00000340882 DCST1Q5T197 706 aa15.01□□□□□ -0.01
NECTIN1-202ENST00000340882 RBM20Q5T481 1227 aaKnown RBP15.01□□□□□ -0.01
NECTIN1-202ENST00000340882 ANKRD22Q5VYY1 191 aa15.01□□□□□ -0.01
NECTIN1-202ENST00000340882 NXPE4Q6UWF7 544 aa15.01□□□□□ -0.01
NECTIN1-202ENST00000340882 PALM2Q8IXS6 379 aa15.01□□□□□ -0.01
NECTIN1-202ENST00000340882 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP15.01□□□□□ -0.01
NECTIN1-202ENST00000340882 ZNF595Q8IYB9 648 aa15.01□□□□□ -0.01
NECTIN1-202ENST00000340882 MYO1HQ8N1T3 1032 aa15.01□□□□□ -0.01
NECTIN1-202ENST00000340882 AGGF1Q8N302 714 aaeCLIP15.01□□□□□ -0.01
NECTIN1-202ENST00000340882 RASGEF1CQ8N431 466 aa15.01□□□□□ -0.01
NECTIN1-202ENST00000340882 LIX1Q8N485 282 aa15.01□□□□□ -0.01
NECTIN1-202ENST00000340882 C9orf106Q8NAJ2 232 aa15.01□□□□□ -0.01
NECTIN1-202ENST00000340882 OR14A16Q8NHC5 309 aa15.01□□□□□ -0.01
NECTIN1-202ENST00000340882 PPP1R14CQ8TAE6 165 aa15.01□□□□□ -0.01
NECTIN1-202ENST00000340882 DAZLQ92904 295 aaKnown RBP15.01□□□□□ -0.01
NECTIN1-202ENST00000340882 GAL3ST3Q96A11 431 aa15.01□□□□□ -0.01
NECTIN1-202ENST00000340882 FBXL8Q96CD0 374 aa15.01□□□□□ -0.01
NECTIN1-202ENST00000340882 JSRP1Q96MG2 331 aaPredicted RBP15.01□□□□□ -0.01
NECTIN1-202ENST00000340882 TRIB1Q96RU8 372 aa15.01□□□□□ -0.01
NECTIN1-202ENST00000340882 NPLQ9BXD5 320 aaPredicted RBP15.01□□□□□ -0.01
NECTIN1-202ENST00000340882 TSGA10Q9BZW7 698 aa15.01□□□□□ -0.01
NECTIN1-202ENST00000340882 PRDM14Q9GZV8 571 aa15.01□□□□□ -0.01
NECTIN1-202ENST00000340882 PELI2Q9HAT8 420 aa15.01□□□□□ -0.01
NECTIN1-202ENST00000340882 GALNT8Q9NY28 637 aa15.01□□□□□ -0.01
NECTIN1-202ENST00000340882 C6orf203Q9P0P8 240 aaPredicted RBP15.01□□□□□ -0.01
NECTIN1-202ENST00000340882 FBXO5Q9UKT4 447 aa15.01□□□□□ -0.01
NECTIN1-202ENST00000340882 BOKQ9UMX3 212 aaPredicted RBP15.01□□□□□ -0.01
NECTIN1-202ENST00000340882 SLC6A5Q9Y345 797 aa15.01□□□□□ -0.01
NECTIN1-202ENST00000340882 NPFFR2Q9Y5X5 522 aa15.01□□□□□ -0.01
NECTIN1-202ENST00000340882 COMMD10Q9Y6G5 202 aa15.01□□□□□ -0.01
NECTIN1-202ENST00000340882 CAPN6Q9Y6Q1 641 aa15.01□□□□□ -0.01
NECTIN1-202ENST00000340882 MBD3L3A6NE82 208 aaPredicted RBP15□□□□□ -0.01
NECTIN1-202ENST00000340882 ERI3O43414 337 aaKnown RBP15□□□□□ -0.01
NECTIN1-202ENST00000340882 CTNSO60931 367 aa15□□□□□ -0.01
NECTIN1-202ENST00000340882 LDB3O75112 727 aa15□□□□□ -0.01
NECTIN1-202ENST00000340882 HIST1H2AGP0C0S8 130 aaPredicted RBP15□□□□□ -0.01
NECTIN1-202ENST00000340882 HIST1H2ADP20671 130 aa15□□□□□ -0.01
NECTIN1-202ENST00000340882 CERS1P27544 350 aa15□□□□□ -0.01
NECTIN1-202ENST00000340882 RGS4P49798 205 aa15□□□□□ -0.01
NECTIN1-202ENST00000340882 LIM2P55344 173 aa15□□□□□ -0.01
NECTIN1-202ENST00000340882 ID2Q02363 134 aa15□□□□□ -0.01
NECTIN1-202ENST00000340882 MPEG1Q2M385 716 aa15□□□□□ -0.01
NECTIN1-202ENST00000340882 SEL1L2Q5TEA6 688 aa15□□□□□ -0.01
NECTIN1-202ENST00000340882 LUZP2Q86TE4 346 aa15□□□□□ -0.01
NECTIN1-202ENST00000340882 THOC6Q86W42 341 aaKnown RBP15□□□□□ -0.01
NECTIN1-202ENST00000340882 C9orf40Q8IXQ3 194 aa15□□□□□ -0.01
NECTIN1-202ENST00000340882 KLHDC8AQ8IYD2 350 aa15□□□□□ -0.01
NECTIN1-202ENST00000340882 SYCE1Q8N0S2 351 aa15□□□□□ -0.01
NECTIN1-202ENST00000340882 OR10G3Q8NGC4 313 aa15□□□□□ -0.01
NECTIN1-202ENST00000340882 MBD3L2Q8NHZ7 208 aaPredicted RBP15□□□□□ -0.01
NECTIN1-202ENST00000340882 HSPBAP1Q96EW2 488 aa15□□□□□ -0.01
NECTIN1-202ENST00000340882 FAR2Q96K12 515 aa15□□□□□ -0.01
NECTIN1-202ENST00000340882 HIST1H2AHQ96KK5 128 aa15□□□□□ -0.01
NECTIN1-202ENST00000340882 HIST1H2AJQ99878 128 aa15□□□□□ -0.01
NECTIN1-202ENST00000340882 AIF1LQ9BQI0 150 aa15□□□□□ -0.01
NECTIN1-202ENST00000340882 H2AFJQ9BTM1 129 aa15□□□□□ -0.01
NECTIN1-202ENST00000340882 RBM24Q9BX46 236 aaKnown RBP15□□□□□ -0.01
NECTIN1-202ENST00000340882 QPCTLQ9NXS2 382 aa15□□□□□ -0.01
NECTIN1-202ENST00000340882 CNOT11Q9UKZ1 510 aaKnown RBP15□□□□□ -0.01
NECTIN1-202ENST00000340882 CAMK2AQ9UQM7 478 aa15□□□□□ -0.01
NECTIN1-202ENST00000340882 CHCHD2Q9Y6H1 151 aaPredicted RBP15□□□□□ -0.01
NECTIN1-202ENST00000340882 EXPH5Q8NEV8 1989 aa15□□□□□ -0.01
NECTIN1-202ENST00000340882 LRIT2A6NDA9 550 aa14.99□□□□□ -0.01
NECTIN1-202ENST00000340882 HRKO00198 91 aa14.99□□□□□ -0.01
NECTIN1-202ENST00000340882 ACSL3O95573 720 aa14.99□□□□□ -0.01
NECTIN1-202ENST00000340882 NID1P14543 1247 aa14.99□□□□□ -0.01
NECTIN1-202ENST00000340882 TNNI3P19429 210 aa14.99□□□□□ -0.01
NECTIN1-202ENST00000340882 GDF1P27539 372 aa14.99□□□□□ -0.01
NECTIN1-202ENST00000340882 GABRB3P28472 473 aa14.99□□□□□ -0.01
NECTIN1-202ENST00000340882 SLCO1A2P46721 670 aa14.99□□□□□ -0.01
NECTIN1-202ENST00000340882 PLA2G16P53816 162 aa14.99□□□□□ -0.01
NECTIN1-202ENST00000340882 CDK16Q00536 496 aa14.99□□□□□ -0.01
NECTIN1-202ENST00000340882 TRIP13Q15645 432 aaPredicted RBP14.99□□□□□ -0.01
NECTIN1-202ENST00000340882 CCNG2Q16589 344 aa14.99□□□□□ -0.01
NECTIN1-202ENST00000340882 BBS9Q3SYG4 887 aa14.99□□□□□ -0.01
NECTIN1-202ENST00000340882 ADNP2Q6IQ32 1131 aa14.99□□□□□ -0.01
NECTIN1-202ENST00000340882 LRRC8EQ6NSJ5 796 aa14.99□□□□□ -0.01
NECTIN1-202ENST00000340882 PLXDC2Q6UX71 529 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms