RNA–Protein interactions for RNA: ENST00000340541.4

VAPA-201, Transcript of VAMP associated protein A, humanhuman

TSL 5 BASIC

Gene VAPA, Length 1,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-201ENST00000340541 MKS1Q9NXB0 559 aa14.39□□□□□ -0.11
VAPA-201ENST00000340541 PLA2G3Q9NZ20 509 aa14.39□□□□□ -0.11
VAPA-201ENST00000340541 FBXW2Q9UKT8 454 aa14.39□□□□□ -0.11
VAPA-201ENST00000340541 PPIEQ9UNP9 301 aaKnown RBP14.39□□□□□ -0.11
VAPA-201ENST00000340541 ATG4BQ9Y4P1 393 aa14.39□□□□□ -0.11
VAPA-201ENST00000340541 ASB4Q9Y574 426 aa14.39□□□□□ -0.11
VAPA-201ENST00000340541 A8MUA0 341 aa14.38□□□□□ -0.11
VAPA-201ENST00000340541 A8MUI8 341 aa14.38□□□□□ -0.11
VAPA-201ENST00000340541 COPEO14579 308 aa14.38□□□□□ -0.11
VAPA-201ENST00000340541 MAN1A2O60476 641 aa14.38□□□□□ -0.11
VAPA-201ENST00000340541 WDPCPO95876 746 aa14.38□□□□□ -0.11
VAPA-201ENST00000340541 PDYNP01213 254 aa14.38□□□□□ -0.11
VAPA-201ENST00000340541 MYL2P10916 166 aa14.38□□□□□ -0.11
VAPA-201ENST00000340541 GPR143P51810 404 aa14.38□□□□□ -0.11
VAPA-201ENST00000340541 IFT88Q13099 833 aa14.38□□□□□ -0.11
VAPA-201ENST00000340541 TERF2Q15554 542 aa14.38□□□□□ -0.11
VAPA-201ENST00000340541 SGO1Q5FBB7 561 aa14.38□□□□□ -0.11
VAPA-201ENST00000340541 TCHHL1Q5QJ38 904 aaPredicted RBP14.38□□□□□ -0.11
VAPA-201ENST00000340541 FCRLBQ6BAA4 426 aa14.38□□□□□ -0.11
VAPA-201ENST00000340541 TTC19Q6DKK2 380 aaPredicted RBP14.38□□□□□ -0.11
VAPA-201ENST00000340541 GPRIN3Q6ZVF9 776 aa14.38□□□□□ -0.11
VAPA-201ENST00000340541 GPR180Q86V85 440 aa14.38□□□□□ -0.11
VAPA-201ENST00000340541 CRLF3Q8IUI8 442 aa14.38□□□□□ -0.11
VAPA-201ENST00000340541 BANPQ8N9N5 519 aa14.38□□□□□ -0.11
VAPA-201ENST00000340541 APCDD1LQ8NCL9 501 aa14.38□□□□□ -0.11
VAPA-201ENST00000340541 DNAJB14Q8TBM8 379 aa14.38□□□□□ -0.11
VAPA-201ENST00000340541 RDH11Q8TC12 318 aa14.38□□□□□ -0.11
VAPA-201ENST00000340541 HAS2Q92819 552 aa14.38□□□□□ -0.11
VAPA-201ENST00000340541 ANKRD9Q96BM1 317 aaPredicted RBP14.38□□□□□ -0.11
VAPA-201ENST00000340541 CCDC126Q96EE4 140 aa14.38□□□□□ -0.11
VAPA-201ENST00000340541 TMEM109Q9BVC6 243 aa14.38□□□□□ -0.11
VAPA-201ENST00000340541 ROPN1BQ9BZX4 212 aaPredicted RBP14.38□□□□□ -0.11
VAPA-201ENST00000340541 RNF32Q9H0A6 362 aa14.38□□□□□ -0.11
VAPA-201ENST00000340541 ELOVL6Q9H5J4 265 aa14.38□□□□□ -0.11
VAPA-201ENST00000340541 ROPN1Q9HAT0 212 aaPredicted RBP14.38□□□□□ -0.11
VAPA-201ENST00000340541 KCNK13Q9HB14 408 aa14.38□□□□□ -0.11
VAPA-201ENST00000340541 CENPEQ02224 2701 aa14.37□□□□□ -0.11
VAPA-201ENST00000340541 ITPR2Q14571 2701 aa14.37□□□□□ -0.11
VAPA-201ENST00000340541 MANBAO00462 879 aa14.37□□□□□ -0.11
VAPA-201ENST00000340541 UBFD1O14562 309 aaKnown RBP14.37□□□□□ -0.11
VAPA-201ENST00000340541 PROM1O43490 865 aa14.37□□□□□ -0.11
VAPA-201ENST00000340541 LDB3O75112 727 aa14.37□□□□□ -0.11
VAPA-201ENST00000340541 PRKRAO75569 313 aaKnown RBP14.37□□□□□ -0.11
VAPA-201ENST00000340541 MYO1DO94832 1006 aa14.37□□□□□ -0.11
VAPA-201ENST00000340541 CLDN1O95832 211 aa14.37□□□□□ -0.11
VAPA-201ENST00000340541 CPN2P22792 545 aa14.37□□□□□ -0.11
VAPA-201ENST00000340541 TNFSF10P50591 281 aa14.37□□□□□ -0.11
VAPA-201ENST00000340541 DNAJB13P59910 316 aa14.37□□□□□ -0.11
VAPA-201ENST00000340541 IGLV3-21P80748 117 aaPredicted RBP14.37□□□□□ -0.11
VAPA-201ENST00000340541 TNFRSF17Q02223 184 aa14.37□□□□□ -0.11
VAPA-201ENST00000340541 ZNF33BQ06732 778 aa14.37□□□□□ -0.11
VAPA-201ENST00000340541 IFFO1Q0D2I5 559 aa14.37□□□□□ -0.11
VAPA-201ENST00000340541 LCP2Q13094 533 aa14.37□□□□□ -0.11
VAPA-201ENST00000340541 ZNF169Q14929 603 aaPredicted RBP14.37□□□□□ -0.11
VAPA-201ENST00000340541 TLR1Q15399 786 aa14.37□□□□□ -0.11
VAPA-201ENST00000340541 ACER2Q5QJU3 275 aa14.37□□□□□ -0.11
VAPA-201ENST00000340541 ABHD17BQ5VST6 288 aa14.37□□□□□ -0.11
VAPA-201ENST00000340541 C18orf63Q68DL7 685 aa14.37□□□□□ -0.11
VAPA-201ENST00000340541 NUDT13Q86X67 352 aa14.37□□□□□ -0.11
VAPA-201ENST00000340541 CDYL2Q8N8U2 506 aa14.37□□□□□ -0.11
VAPA-201ENST00000340541 B3GNT7Q8NFL0 401 aa14.37□□□□□ -0.11
VAPA-201ENST00000340541 APOPT1Q96IL0 206 aa14.37□□□□□ -0.11
VAPA-201ENST00000340541 CNDP1Q96KN2 507 aa14.37□□□□□ -0.11
VAPA-201ENST00000340541 HBEGFQ99075 208 aa14.37□□□□□ -0.11
VAPA-201ENST00000340541 MRPL1Q9BYD6 325 aaKnown RBP14.37□□□□□ -0.11
VAPA-201ENST00000340541 BRF2Q9HAW0 419 aa14.37□□□□□ -0.11
VAPA-201ENST00000340541 ADAP2Q9NPF8 381 aa14.37□□□□□ -0.11
VAPA-201ENST00000340541 PNO1Q9NRX1 252 aaKnown RBP14.37□□□□□ -0.11
VAPA-201ENST00000340541 OXSMQ9NWU1 459 aa14.37□□□□□ -0.11
VAPA-201ENST00000340541 MS4A12Q9NXJ0 267 aa14.37□□□□□ -0.11
VAPA-201ENST00000340541 STMN3Q9NZ72 180 aa14.37□□□□□ -0.11
VAPA-201ENST00000340541 VTI1BQ9UEU0 232 aa14.37□□□□□ -0.11
VAPA-201ENST00000340541 PHF11Q9UIL8 331 aa14.37□□□□□ -0.11
VAPA-201ENST00000340541 ZNF223Q9UK11 482 aaPredicted RBP14.37□□□□□ -0.11
VAPA-201ENST00000340541 SNX6Q9UNH7 406 aa14.37□□□□□ -0.11
VAPA-201ENST00000340541 NTNG1Q9Y2I2 539 aa14.37□□□□□ -0.11
VAPA-201ENST00000340541 SPACA6W5XKT8 324 aa14.37□□□□□ -0.11
VAPA-201ENST00000340541 POLEQ07864 2286 aa14.37□□□□□ -0.11
VAPA-201ENST00000340541 MYOCOSA0A1B0GUC4 107 aa14.36□□□□□ -0.11
VAPA-201ENST00000340541 A0A1W2PR48 441 aa14.36□□□□□ -0.11
VAPA-201ENST00000340541 A1L4Q6 167 aa14.36□□□□□ -0.11
VAPA-201ENST00000340541 WASHC1A8K0Z3 465 aa14.36□□□□□ -0.11
VAPA-201ENST00000340541 FGF17O60258 216 aa14.36□□□□□ -0.11
VAPA-201ENST00000340541 MLYCDO95822 493 aa14.36□□□□□ -0.11
VAPA-201ENST00000340541 F10P00742 488 aa14.36□□□□□ -0.11
VAPA-201ENST00000340541 GBAP04062 536 aa14.36□□□□□ -0.11
VAPA-201ENST00000340541 FAM58BPP0C7Q3 252 aa14.36□□□□□ -0.11
VAPA-201ENST00000340541 CPA3P15088 417 aa14.36□□□□□ -0.11
VAPA-201ENST00000340541 TPP2P29144 1249 aaPredicted RBP14.36□□□□□ -0.11
VAPA-201ENST00000340541 NAGLUP54802 743 aa14.36□□□□□ -0.11
VAPA-201ENST00000340541 PKNOX1P55347 436 aa14.36□□□□□ -0.11
VAPA-201ENST00000340541 ARG2P78540 354 aa14.36□□□□□ -0.11
VAPA-201ENST00000340541 ID2Q02363 134 aa14.36□□□□□ -0.11
VAPA-201ENST00000340541 ZNF844Q08AG5 666 aa14.36□□□□□ -0.11
VAPA-201ENST00000340541 GALNT1Q10472 559 aaPredicted RBP14.36□□□□□ -0.11
VAPA-201ENST00000340541 TBL3Q12788 808 aaKnown RBP14.36□□□□□ -0.11
VAPA-201ENST00000340541 PCLAFQ15004 111 aa14.36□□□□□ -0.11
VAPA-201ENST00000340541 ELAVL1Q15717 326 aaKnown RBP14.36□□□□□ -0.11
VAPA-201ENST00000340541 RPUSD3Q6P087 351 aaKnown RBP14.36□□□□□ -0.11
VAPA-201ENST00000340541 SLC34A3Q8N130 599 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms